RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 G6PC3Q9BUM1 346 aa8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 C12orf65Q9H3J6 166 aaKnown RBP8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 ANKRA2Q9H9E1 313 aa8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 SSU72Q9NP77 194 aaKnown RBP8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 NTMQ9P121 344 aa8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 EIF3LQ9Y262 564 aaKnown RBP8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 L3MBTL1Q9Y468 752 aa8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 NCKAP5O14513 1909 aa8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 CCDC168Q8NDH2 2452 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 A0A087WZY1 265 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 C2orf72A6NCS6 295 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 CLCA1A8K7I4 914 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 EEF1E1-BLOC1S5C9J1V9 151 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 TM9SF1O15321 606 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 BIRC5O15392 142 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 EEF1E1O43324 174 aaKnown RBP8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 AKAP10O43572 662 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 ZNF500O60304 480 aaPredicted RBP8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 FADS1O60427 444 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 SPAG7O75391 227 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 NKX2-2O95096 273 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 RCBTB2O95199 551 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 CHRNGP07510 517 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 BPGMP07738 259 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 ALOX5P09917 674 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 BCKDHAP12694 445 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 CD1EP15812 388 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 HK1P19367 917 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 PRPS1L1P21108 318 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 ATP6V1C1P21283 382 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 TACR1P25103 407 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 GABRA3P34903 492 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 ZNF136P52737 540 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 OCRLQ01968 901 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 SRYQ05066 204 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 STX5Q13190 355 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 TP53BP2Q13625 1128 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 SMU1Q2TAY7 513 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 XKR7Q5GH72 579 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 DCST1Q5T197 706 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 CPTPQ5TA50 214 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 FAM219BQ5XKK7 198 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 SEM1Q6ZVN7 128 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 ZNF551Q7Z340 670 aaPredicted RBP8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 LIX1LQ8IVB5 337 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 NUDCD3Q8IVD9 361 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 COX18Q8N8Q8 333 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 FADS6Q8N9I5 356 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 FNDC5Q8NAU1 212 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 ZNF527Q8NB42 609 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 RELL2Q8NC24 303 aaPredicted RBP8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 NAXEQ8NCW5 288 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 NUP43Q8NFH3 380 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 OR2M3Q8NG83 312 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 OR4N2Q8NGD1 307 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 OR56A1Q8NGH5 318 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 OR2T11Q8NH01 316 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 SLC9A6Q92581 669 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 HOXB13Q92826 284 aaPredicted RBP8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 GFM2Q969S9 779 aaKnown RBP8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 RMND5BQ96G75 393 aaPredicted RBP8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 STACQ99469 402 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 SH3GL2Q99962 352 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 TUBA1CQ9BQE3 449 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 DSN1Q9H410 356 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 TUBB1Q9H4B7 451 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 TNFRSF12AQ9NP84 129 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 FANCFQ9NPI8 374 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 EQTNQ9NQ60 294 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 DUSP22Q9NRW4 184 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 ZCCHC3Q9NUD5 404 aaKnown RBP8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 PAQR5Q9NXK6 330 aaPredicted RBP8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 GIN1Q9NXP7 522 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 SLC17A7Q9P2U7 560 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 ATP6V1HQ9UI12 483 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 FBXL2Q9UKC9 423 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 PACSIN3Q9UKS6 424 aa8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 FAF1Q9UNN5 650 aaPredicted RBP8.24□□□□□ -1.09
SNORD88A-201ENST00000408314 FBN2P35556 2912 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 DCHS2Q6V1P9 2916 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 FREM3P0C091 2139 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 UQCRHLA0A096LP55 91 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 IGLV3-32A0A0A0MS00 114 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 A0A1W2PQD3 144 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 A0A1W2PRB8 838 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 TUBAL3A6NHL2 446 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 SLC22A20A6NK97 555 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 ALG1L2C9J202 215 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 H3BNH8 94 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 SCDO00767 359 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 HCRTR2O43614 444 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 NDUFB5O43674 189 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 TYROBPO43914 113 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 PEX11AO75192 247 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 UTS2O95399 124 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 ANGPTL1O95841 491 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 SERPINE1P05121 402 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 ZNF17P17021 662 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 ME2P23368 584 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms