RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 A0A1B0GW55 424 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 TMEM82A0PJX8 343 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 PIP5K1CO60331 668 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 PRAMEF11O60813 436 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 UBL3O95164 117 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 S100A8P05109 93 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 DUX4L2P0CJ85 424 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 DUX4L3P0CJ86 424 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 DUX4L4P0CJ87 422 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 DUX4L5P0CJ88 424 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 DUX4L6P0CJ89 424 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 DUX4L7P0CJ90 424 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 ADCYAP1P18509 176 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 ANXA7P20073 488 aaKnown RBP12.01□□□□□ -0.49
HERC3-203ENST00000407637 PRKAR1BP31321 381 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 GDNFP39905 211 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 PCBP3P57721 371 aaKnown RBP12.01□□□□□ -0.49
HERC3-203ENST00000407637 LSM11P83369 360 aaKnown RBP eCLIP12.01□□□□□ -0.49
HERC3-203ENST00000407637 MAT1AQ00266 395 aaKnown RBP12.01□□□□□ -0.49
HERC3-203ENST00000407637 MINDY4Q4G0A6 757 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 ZNF385BQ569K4 471 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 SLC36A4Q6YBV0 504 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 GPC2Q8N158 579 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 SVBPQ8N300 66 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 FAM71CQ8NEG0 241 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 TMEM185AQ8NFB2 350 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 GCDHQ92947 438 aaPredicted RBP12.01□□□□□ -0.49
HERC3-203ENST00000407637 ART5Q96L15 291 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 PLA2G12AQ9BZM1 189 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 BTBD1Q9H0C5 482 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 SLC25A32Q9H2D1 315 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 MVB12BQ9H7P6 319 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 HMX1Q9NP08 348 aaPredicted RBP12.01□□□□□ -0.49
HERC3-203ENST00000407637 SDHAF3Q9NRP4 125 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 MRPS18AQ9NVS2 196 aaKnown RBP12.01□□□□□ -0.49
HERC3-203ENST00000407637 ASB6Q9NWX5 421 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 DUX4Q9UBX2 424 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 PCDHGC4Q9Y5F7 938 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 IRGMA1A4Y4 181 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 SEPT4O43236 478 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 NME6O75414 186 aaPredicted RBP12.01□□□□□ -0.49
HERC3-203ENST00000407637 OR2A4O95047 310 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 C6orf47O95873 294 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 KLK3P07288 261 aaPredicted RBP12.01□□□□□ -0.49
HERC3-203ENST00000407637 H1F0P07305 194 aaKnown RBP12.01□□□□□ -0.49
HERC3-203ENST00000407637 ANXA5P08758 320 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 FPR3P25089 353 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 ATP5C1P36542 298 aaKnown RBP12.01□□□□□ -0.49
HERC3-203ENST00000407637 MAPK9P45984 424 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 GIPRP48546 466 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 LHX1P48742 406 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 ACSM2AQ08AH3 577 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 GGTA1PQ4G0N0 100 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 MANEAQ5SRI9 462 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 SLC25A30Q5SVS4 291 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 ACSM2BQ68CK6 577 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 C18orf63Q68DL7 685 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 SMARCD3Q6STE5 483 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 ZBTB2Q8N680 514 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 OR52N2Q8NGI0 321 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 SLC7A13Q8TCU3 470 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 ELP5Q8TE02 316 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 KCTD12Q96CX2 325 aaKnown RBP12.01□□□□□ -0.49
HERC3-203ENST00000407637 OR2A7Q96R45 310 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 GINS4Q9BRT9 223 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 TRIM62Q9BVG3 475 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 PRM3Q9NNZ6 103 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 KLHL1Q9NR64 748 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 C1GALT1Q9NS00 363 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 MKL2Q9ULH7 1088 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 PCDHB1Q9Y5F3 818 aa12.01□□□□□ -0.49
HERC3-203ENST00000407637 A0A1W2PQH9 124 aa12□□□□□ -0.49
HERC3-203ENST00000407637 RNF13O43567 381 aa12□□□□□ -0.49
HERC3-203ENST00000407637 AQP8O94778 261 aa12□□□□□ -0.49
HERC3-203ENST00000407637 EPHX1P07099 455 aa12□□□□□ -0.49
HERC3-203ENST00000407637 TYRP14679 529 aa12□□□□□ -0.49
HERC3-203ENST00000407637 PSMB1P20618 241 aaKnown RBP12□□□□□ -0.49
HERC3-203ENST00000407637 IDSP22304 550 aa12□□□□□ -0.49
HERC3-203ENST00000407637 OR1E1P30953 314 aa12□□□□□ -0.49
HERC3-203ENST00000407637 CTSOP43234 321 aaPredicted RBP12□□□□□ -0.49
HERC3-203ENST00000407637 ANXA8L1Q5VT79 327 aa12□□□□□ -0.49
HERC3-203ENST00000407637 FAM109BQ6ICB4 259 aaPredicted RBP12□□□□□ -0.49
HERC3-203ENST00000407637 TCTN3Q6NUS6 607 aa12□□□□□ -0.49
HERC3-203ENST00000407637 FBXL22Q6P050 247 aa12□□□□□ -0.49
HERC3-203ENST00000407637 GLDNQ6ZMI3 551 aaPredicted RBP12□□□□□ -0.49
HERC3-203ENST00000407637 KLHL36Q8N4N3 616 aa12□□□□□ -0.49
HERC3-203ENST00000407637 OR4D9Q8NGE8 314 aa12□□□□□ -0.49
HERC3-203ENST00000407637 GANCQ8TET4 914 aa12□□□□□ -0.49
HERC3-203ENST00000407637 ENKD1Q9H0I2 346 aa12□□□□□ -0.49
HERC3-203ENST00000407637 ANGPT4Q9Y264 503 aa12□□□□□ -0.49
HERC3-203ENST00000407637 OR10H1Q9Y4A9 318 aa12□□□□□ -0.49
HERC3-203ENST00000407637 HMSDA8MTL9 139 aa12□□□□□ -0.49
HERC3-203ENST00000407637 F12P00748 615 aaPredicted RBP12□□□□□ -0.49
HERC3-203ENST00000407637 CPN1P15169 458 aa12□□□□□ -0.49
HERC3-203ENST00000407637 IFNGR1P15260 489 aa12□□□□□ -0.49
HERC3-203ENST00000407637 ACHEP22303 614 aa12□□□□□ -0.49
HERC3-203ENST00000407637 PSMA3P25788 255 aa12□□□□□ -0.49
HERC3-203ENST00000407637 UBE2IP63279 158 aaKnown RBP12□□□□□ -0.49
HERC3-203ENST00000407637 PRR5P85299 388 aa12□□□□□ -0.49
HERC3-203ENST00000407637 MLLT1Q03111 559 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms