RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 CPXM1Q96SM3 734 aa4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 MRPL13Q9BYD1 178 aaKnown RBP4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 STRADBQ9C0K7 418 aa4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 NAT10Q9H0A0 1025 aaKnown RBP4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 IKZF3Q9UKT9 509 aa4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 FZR1Q9UM11 496 aa4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 MRPS28Q9Y2Q9 187 aaKnown RBP4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 IGHV3-20A0A0C4DH32 117 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 CLRN2A0PK11 232 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 TRIM49BA6NDI0 452 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 GOLGA6L19H0YKK7 550 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 FBP2O00757 339 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 CYB561D2O14569 222 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 EI24O14681 340 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 MAGEB3O15480 346 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 LANCL1O43813 399 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 TBX19O60806 448 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 NXPH4O95158 308 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 CLDN1O95832 211 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 MMP1P03956 469 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 TPM2P07951 284 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 ASNSP08243 561 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 ANXA4P09525 319 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 TRIM49P0CI25 452 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 TRIM49CP0CI26 452 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 CALM1P0DP23 149 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 CALM2P0DP24 149 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 CALM3P0DP25 149 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 ZNF26P17031 533 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 HNRNPA2B1P22626 353 aaKnown RBP4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 PSMA2P25787 234 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 SGSHP51688 502 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 PEX3P56589 373 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 GSCP56915 257 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 OSTNP61366 133 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 GSTO1P78417 241 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 NFATC2Q13469 925 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 EMC2Q15006 297 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 ZFP69Q49AA0 526 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 RESP18Q5W5W9 173 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 TMEM110Q86TL2 294 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 FAM131BQ86XD5 332 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 CBWD2Q8IUF1 395 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 CCDC36Q8IYA8 594 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 OR2T6Q8NHC8 308 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 SLC25A36Q96CQ1 311 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 PGLYRP2Q96PD5 576 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 MYCBPQ99417 103 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 BPIFA3Q9BQP9 254 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 TEX13BQ9BXU2 312 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 BARHL1Q9BZE3 327 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 CRNKL1Q9BZJ0 848 aaKnown RBP4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 POLR1EQ9GZS1 481 aaKnown RBP4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 Q9HAA7 133 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 LPAR2Q9HBW0 351 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 SDF2L1Q9HCN8 221 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 TRPV5Q9NQA5 729 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 RBM28Q9NW13 759 aaKnown RBP4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 KLRF1Q9NZS2 232 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 PROCRQ9UNN8 238 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 NRAPQ86VF7 1730 aa4.01□□□□□ -1.77
HMGB3P18-201ENST00000406327 RREB1Q92766 1687 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 COL1A1P02452 1464 aaPredicted RBP4□□□□□ -1.77
HMGB3P18-201ENST00000406327 CICQ96RK0 1608 aaPredicted RBP4□□□□□ -1.77
HMGB3P18-201ENST00000406327 AK9Q5TCS8 1911 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 RNF222A6NCQ9 220 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 RNF212BA8MTL3 300 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 A8MUI8 341 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 IKBKBO14920 756 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 ALOX15BO15296 676 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 EDIL3O43854 480 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 DUSP11O75319 330 aaKnown RBP4□□□□□ -1.77
HMGB3P18-201ENST00000406327 BBOX1O75936 387 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 OR4F21O95013 312 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 HPRP00739 348 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 CSF2P04141 144 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 ZCCHC18P0CG32 403 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 UQCRBP14927 111 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 CD1DP15813 335 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 MAT2AP31153 395 aaKnown RBP4□□□□□ -1.77
HMGB3P18-201ENST00000406327 PTGFRP43088 359 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 SYKP43405 635 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 HNMTP50135 292 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 SRPXP78539 464 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 FASTKD3Q14CZ7 662 aaKnown RBP4□□□□□ -1.77
HMGB3P18-201ENST00000406327 TATDN3Q17R31 274 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 KNOP1Q1ED39 458 aaKnown RBP4□□□□□ -1.77
HMGB3P18-201ENST00000406327 MS4A18Q3C1V0 323 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 TMEM30BQ3MIR4 351 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 NADK2Q4G0N4 442 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 TCHHL1Q5QJ38 904 aaPredicted RBP4□□□□□ -1.77
HMGB3P18-201ENST00000406327 MUC21Q5SSG8 566 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 ARHGAP11AQ6P4F7 1023 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 KDELC1Q6UW63 502 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 RGS9BPQ6ZS82 235 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 NET1Q7Z628 596 aaPredicted RBP4□□□□□ -1.77
HMGB3P18-201ENST00000406327 ZFAND4Q86XD8 727 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 ARFGAP2Q8N6H7 521 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 ZNF248Q8NDW4 579 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms