RNA–Protein interactions for RNA: ENST00000400301.5

USP48-204, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 4,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-204ENST00000400301 ZC3H14Q6PJT7 736 aaKnown RBP17.41■□□□□ 0.38
USP48-204ENST00000400301 CDH24Q86UP0 819 aa17.41■□□□□ 0.38
USP48-204ENST00000400301 OR51L1Q8NGJ5 315 aa17.41■□□□□ 0.38
USP48-204ENST00000400301 SPRYD4Q8WW59 207 aaPredicted RBP17.41■□□□□ 0.38
USP48-204ENST00000400301 HS6ST2Q96MM7 605 aa17.41■□□□□ 0.38
USP48-204ENST00000400301 OR8D2Q9GZM6 311 aa17.41■□□□□ 0.38
USP48-204ENST00000400301 HCN3Q9P1Z3 774 aa17.41■□□□□ 0.38
USP48-204ENST00000400301 EEF1E1O43324 174 aaKnown RBP17.41■□□□□ 0.38
USP48-204ENST00000400301 RENP00797 406 aa17.41■□□□□ 0.38
USP48-204ENST00000400301 PVRP15151 417 aa17.41■□□□□ 0.38
USP48-204ENST00000400301 MMP11P24347 488 aa17.41■□□□□ 0.38
USP48-204ENST00000400301 EIF2DP41214 584 aaKnown RBP17.41■□□□□ 0.38
USP48-204ENST00000400301 ALG10BQ5I7T1 473 aa17.41■□□□□ 0.38
USP48-204ENST00000400301 TCTN3Q6NUS6 607 aa17.41■□□□□ 0.38
USP48-204ENST00000400301 ABHD17CQ6PCB6 329 aa17.41■□□□□ 0.38
USP48-204ENST00000400301 TMEM239Q8WW34 195 aa17.41■□□□□ 0.38
USP48-204ENST00000400301 KLHDC7BQ96G42 594 aa17.41■□□□□ 0.38
USP48-204ENST00000400301 CSF3RQ99062 836 aa17.41■□□□□ 0.38
USP48-204ENST00000400301 TMEM246Q9BRR3 403 aa17.41■□□□□ 0.38
USP48-204ENST00000400301 LGR4Q9BXB1 951 aa17.41■□□□□ 0.38
USP48-204ENST00000400301 ABCG5Q9H222 651 aa17.41■□□□□ 0.38
USP48-204ENST00000400301 PAQR5Q9NXK6 330 aaPredicted RBP17.41■□□□□ 0.38
USP48-204ENST00000400301 ZNF226Q9NYT6 803 aa17.41■□□□□ 0.38
USP48-204ENST00000400301 ACTR10Q9NZ32 417 aa17.41■□□□□ 0.38
USP48-204ENST00000400301 PRSS38A1L453 326 aa17.4■□□□□ 0.38
USP48-204ENST00000400301 HMGN4O00479 90 aa17.4■□□□□ 0.38
USP48-204ENST00000400301 MYOGP15173 224 aa17.4■□□□□ 0.38
USP48-204ENST00000400301 LYSMD2Q8IV50 215 aa17.4■□□□□ 0.38
USP48-204ENST00000400301 TSTD1Q8NFU3 115 aa17.4■□□□□ 0.38
USP48-204ENST00000400301 OR4K13Q8NH42 304 aa17.4■□□□□ 0.38
USP48-204ENST00000400301 ALG8Q9BVK2 526 aa17.4■□□□□ 0.38
USP48-204ENST00000400301 TBL1XR1Q9BZK7 514 aa17.4■□□□□ 0.38
USP48-204ENST00000400301 NFKBIL1Q9UBC1 381 aaPredicted RBP17.4■□□□□ 0.38
USP48-204ENST00000400301 CKLFQ9UBR5 152 aa17.4■□□□□ 0.38
USP48-204ENST00000400301 CXorf51AA0A1B0GTR3 108 aa17.4■□□□□ 0.38
USP48-204ENST00000400301 RGS9O75916 674 aaPredicted RBP17.4■□□□□ 0.38
USP48-204ENST00000400301 HNRNPA2B1P22626 353 aaKnown RBP17.4■□□□□ 0.38
USP48-204ENST00000400301 OR12D2P58182 307 aa17.4■□□□□ 0.38
USP48-204ENST00000400301 CCDC157Q569K6 752 aa17.4■□□□□ 0.38
USP48-204ENST00000400301 SPATC1Q76KD6 591 aa17.4■□□□□ 0.38
USP48-204ENST00000400301 PHOSPHO2Q8TCD6 241 aa17.4■□□□□ 0.38
USP48-204ENST00000400301 FBXO8Q9NRD0 319 aa17.4■□□□□ 0.38
USP48-204ENST00000400301 COPS7AQ9UBW8 275 aa17.4■□□□□ 0.38
USP48-204ENST00000400301 CYP8B1Q9UNU6 501 aa17.4■□□□□ 0.38
USP48-204ENST00000400301 LRIT2A6NDA9 550 aa17.4■□□□□ 0.38
USP48-204ENST00000400301 PRKYO43930 277 aa17.4■□□□□ 0.38
USP48-204ENST00000400301 RNH1P13489 461 aaKnown RBP17.4■□□□□ 0.38
USP48-204ENST00000400301 CAV3P56539 151 aa17.4■□□□□ 0.38
USP48-204ENST00000400301 KIR2DS3Q14952 304 aa17.4■□□□□ 0.38
USP48-204ENST00000400301 PGGHGQ32M88 737 aa17.4■□□□□ 0.38
USP48-204ENST00000400301 NRARPQ7Z6K4 114 aa17.4■□□□□ 0.38
USP48-204ENST00000400301 LAX1Q8IWV1 398 aa17.4■□□□□ 0.38
USP48-204ENST00000400301 YIPF7Q8N8F6 280 aa17.4■□□□□ 0.38
USP48-204ENST00000400301 OR52E2Q8NGJ4 325 aa17.4■□□□□ 0.38
USP48-204ENST00000400301 ASB16Q96NS5 453 aa17.4■□□□□ 0.38
USP48-204ENST00000400301 BEX1Q9HBH7 125 aa17.4■□□□□ 0.38
USP48-204ENST00000400301 USP36Q9P275 1121 aaKnown RBP17.4■□□□□ 0.38
USP48-204ENST00000400301 CSO75390 466 aaKnown RBP17.4■□□□□ 0.38
USP48-204ENST00000400301 IL1AP01583 271 aa17.4■□□□□ 0.38
USP48-204ENST00000400301 CXCR1P25024 350 aa17.4■□□□□ 0.38
USP48-204ENST00000400301 UBE2Q1Q7Z7E8 422 aa17.4■□□□□ 0.38
USP48-204ENST00000400301 CADM3Q8N126 398 aa17.4■□□□□ 0.38
USP48-204ENST00000400301 ASCC1Q8N9N2 400 aaKnown RBP17.4■□□□□ 0.38
USP48-204ENST00000400301 OR52D1Q9H346 318 aa17.4■□□□□ 0.38
USP48-204ENST00000400301 KLHL31Q9H511 634 aa17.4■□□□□ 0.38
USP48-204ENST00000400301 GXYLT2A0PJZ3 443 aa17.39■□□□□ 0.37
USP48-204ENST00000400301 OR5K4A6NMS3 321 aa17.39■□□□□ 0.37
USP48-204ENST00000400301 ZAR1LA6NP61 321 aa17.39■□□□□ 0.37
USP48-204ENST00000400301 A8MU76 341 aa17.39■□□□□ 0.37
USP48-204ENST00000400301 ACTC1P68032 377 aa17.39■□□□□ 0.37
USP48-204ENST00000400301 ACTA1P68133 377 aa17.39■□□□□ 0.37
USP48-204ENST00000400301 B3GLCTQ6Y288 498 aa17.39■□□□□ 0.37
USP48-204ENST00000400301 DEFB119Q8N690 84 aa17.39■□□□□ 0.37
USP48-204ENST00000400301 OR10H5Q8NGA6 315 aa17.39■□□□□ 0.37
USP48-204ENST00000400301 ZNF582Q96NG8 517 aaPredicted RBP17.39■□□□□ 0.37
USP48-204ENST00000400301 GPN1Q9HCN4 374 aaPredicted RBP17.39■□□□□ 0.37
USP48-204ENST00000400301 LCMT2O60294 686 aaKnown RBP17.39■□□□□ 0.37
USP48-204ENST00000400301 PSMA3P25788 255 aa17.39■□□□□ 0.37
USP48-204ENST00000400301 AGAP6Q5VW22 663 aa17.39■□□□□ 0.37
USP48-204ENST00000400301 BTLAQ7Z6A9 289 aa17.39■□□□□ 0.37
USP48-204ENST00000400301 ASB15Q8WXK1 588 aa17.39■□□□□ 0.37
USP48-204ENST00000400301 AGAP4Q96P64 663 aa17.39■□□□□ 0.37
USP48-204ENST00000400301 CHIAQ9BZP6 476 aa17.39■□□□□ 0.37
USP48-204ENST00000400301 ZNF670-ZNF695F2Z2N8 137 aa17.39■□□□□ 0.37
USP48-204ENST00000400301 ODF4Q2M2E3 257 aa17.39■□□□□ 0.37
USP48-204ENST00000400301 CAMKMTQ7Z624 323 aa17.39■□□□□ 0.37
USP48-204ENST00000400301 TMEFF1Q8IYR6 380 aa17.39■□□□□ 0.37
USP48-204ENST00000400301 SETD6Q8TBK2 473 aa17.39■□□□□ 0.37
USP48-204ENST00000400301 PEX11GQ96HA9 241 aa17.39■□□□□ 0.37
USP48-204ENST00000400301 PIAS3Q9Y6X2 628 aa17.39■□□□□ 0.37
USP48-204ENST00000400301 PPP1R3DO95685 299 aa17.38■□□□□ 0.37
USP48-204ENST00000400301 PEPDP12955 493 aa17.38■□□□□ 0.37
USP48-204ENST00000400301 GPNMBQ14956 572 aa17.38■□□□□ 0.37
USP48-204ENST00000400301 EXOSC7Q15024 291 aaKnown RBP17.38■□□□□ 0.37
USP48-204ENST00000400301 ZNF619Q8N2I2 560 aa17.38■□□□□ 0.37
USP48-204ENST00000400301 TBC1D20Q96BZ9 403 aa17.38■□□□□ 0.37
USP48-204ENST00000400301 SGTBQ96EQ0 304 aa17.38■□□□□ 0.37
USP48-204ENST00000400301 MRGPRX3Q96LB0 322 aa17.38■□□□□ 0.37
USP48-204ENST00000400301 DPYSL5Q9BPU6 564 aa17.38■□□□□ 0.37
USP48-204ENST00000400301 OR2B2Q9GZK3 357 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms