RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 ZDHHC4Q9NPG8 344 aa16.04■□□□□ 0.16
PTPRA-205ENST00000399903 HPF1Q9NWY4 346 aa16.04■□□□□ 0.16
PTPRA-205ENST00000399903 H2AFY2Q9P0M6 372 aaPredicted RBP16.04■□□□□ 0.16
PTPRA-205ENST00000399903 MGAT4CQ9UBM8 478 aa16.04■□□□□ 0.16
PTPRA-205ENST00000399903 SCP2D1Q9UJQ7 156 aa16.04■□□□□ 0.16
PTPRA-205ENST00000399903 AUP1Q9Y679 476 aa16.04■□□□□ 0.16
PTPRA-205ENST00000399903 H0YC42 278 aa16.03■□□□□ 0.16
PTPRA-205ENST00000399903 ARPC5O15511 151 aa16.03■□□□□ 0.16
PTPRA-205ENST00000399903 FZD6O60353 706 aa16.03■□□□□ 0.16
PTPRA-205ENST00000399903 ACP2P11117 423 aa16.03■□□□□ 0.16
PTPRA-205ENST00000399903 HSD3B1P14060 373 aa16.03■□□□□ 0.16
PTPRA-205ENST00000399903 BTCP35070 178 aa16.03■□□□□ 0.16
PTPRA-205ENST00000399903 IRS1P35568 1242 aa16.03■□□□□ 0.16
PTPRA-205ENST00000399903 OCLNQ16625 522 aa16.03■□□□□ 0.16
PTPRA-205ENST00000399903 SPIN4Q56A73 249 aa16.03■□□□□ 0.16
PTPRA-205ENST00000399903 Q6ZNB5 142 aa16.03■□□□□ 0.16
PTPRA-205ENST00000399903 C11orf96Q7Z7L8 435 aa16.03■□□□□ 0.16
PTPRA-205ENST00000399903 ZFPM2Q8WW38 1151 aa16.03■□□□□ 0.16
PTPRA-205ENST00000399903 ASB11Q8WXH4 323 aa16.03■□□□□ 0.16
PTPRA-205ENST00000399903 ARMC5Q96C12 935 aa16.03■□□□□ 0.16
PTPRA-205ENST00000399903 ZNF578Q96N58 590 aaPredicted RBP16.03■□□□□ 0.16
PTPRA-205ENST00000399903 HHIPQ96QV1 700 aa16.03■□□□□ 0.16
PTPRA-205ENST00000399903 SEC22CQ9BRL7 303 aa16.03■□□□□ 0.16
PTPRA-205ENST00000399903 ISG20L2Q9H9L3 353 aaKnown RBP16.03■□□□□ 0.16
PTPRA-205ENST00000399903 SCPEP1Q9HB40 452 aa16.03■□□□□ 0.16
PTPRA-205ENST00000399903 ZSCAN32Q9NX65 697 aa16.03■□□□□ 0.16
PTPRA-205ENST00000399903 GMEB2Q9UKD1 530 aa16.03■□□□□ 0.16
PTPRA-205ENST00000399903 CSNK1G3Q9Y6M4 447 aa16.03■□□□□ 0.16
PTPRA-205ENST00000399903 STK25O00506 426 aa16.03■□□□□ 0.16
PTPRA-205ENST00000399903 ARAFP10398 606 aa16.03■□□□□ 0.16
PTPRA-205ENST00000399903 SLC6A12P48065 614 aa16.03■□□□□ 0.16
PTPRA-205ENST00000399903 FNTBP49356 437 aa16.03■□□□□ 0.16
PTPRA-205ENST00000399903 MANFP55145 182 aaKnown RBP16.03■□□□□ 0.16
PTPRA-205ENST00000399903 ZNF763Q0D2J5 394 aa16.03■□□□□ 0.16
PTPRA-205ENST00000399903 TEAD2Q15562 447 aa16.03■□□□□ 0.16
PTPRA-205ENST00000399903 IGSF11Q5DX21 431 aa16.03■□□□□ 0.16
PTPRA-205ENST00000399903 AGTRAPQ6RW13 159 aa16.03■□□□□ 0.16
PTPRA-205ENST00000399903 BBS1Q8NFJ9 593 aa16.03■□□□□ 0.16
PTPRA-205ENST00000399903 SCAMP4Q969E2 229 aa16.03■□□□□ 0.16
PTPRA-205ENST00000399903 WDR89Q96FK6 387 aaPredicted RBP16.03■□□□□ 0.16
PTPRA-205ENST00000399903 USB1Q9BQ65 265 aaKnown RBP16.03■□□□□ 0.16
PTPRA-205ENST00000399903 ARHGAP9Q9BRR9 750 aa16.03■□□□□ 0.16
PTPRA-205ENST00000399903 FUZQ9BT04 418 aa16.03■□□□□ 0.16
PTPRA-205ENST00000399903 ZNF436Q9C0F3 470 aaPredicted RBP16.03■□□□□ 0.16
PTPRA-205ENST00000399903 LYARQ9NX58 379 aaKnown RBP16.03■□□□□ 0.16
PTPRA-205ENST00000399903 ZNF69Q9UC07 566 aa16.03■□□□□ 0.16
PTPRA-205ENST00000399903 NUBP2Q9Y5Y2 271 aa16.03■□□□□ 0.16
PTPRA-205ENST00000399903 ZC3H12DA2A288 527 aaKnown RBP16.02■□□□□ 0.16
PTPRA-205ENST00000399903 ZNF197O14709 1029 aa16.02■□□□□ 0.16
PTPRA-205ENST00000399903 IL3P08700 152 aa16.02■□□□□ 0.16
PTPRA-205ENST00000399903 CTAG1AP78358 180 aa16.02■□□□□ 0.16
PTPRA-205ENST00000399903 EIF2B5Q13144 721 aaKnown RBP16.02■□□□□ 0.16
PTPRA-205ENST00000399903 TMEM201Q5SNT2 666 aa16.02■□□□□ 0.16
PTPRA-205ENST00000399903 SLC36A4Q6YBV0 504 aa16.02■□□□□ 0.16
PTPRA-205ENST00000399903 FAM26EQ8N5C1 309 aa16.02■□□□□ 0.16
PTPRA-205ENST00000399903 POLDIP3Q9BY77 421 aaKnown RBP16.02■□□□□ 0.16
PTPRA-205ENST00000399903 COPZ2Q9P299 210 aa16.02■□□□□ 0.16
PTPRA-205ENST00000399903 TESQ9UGI8 421 aaKnown RBP16.02■□□□□ 0.16
PTPRA-205ENST00000399903 COL4A6Q14031 1691 aa16.02■□□□□ 0.16
PTPRA-205ENST00000399903 DSPPQ9NZW4 1301 aa16.02■□□□□ 0.16
PTPRA-205ENST00000399903 RTCAO00442 366 aaKnown RBP16.02■□□□□ 0.16
PTPRA-205ENST00000399903 PRODHO43272 600 aa16.02■□□□□ 0.16
PTPRA-205ENST00000399903 PIP5K1CO60331 668 aa16.02■□□□□ 0.16
PTPRA-205ENST00000399903 C8GP07360 202 aa16.02■□□□□ 0.16
PTPRA-205ENST00000399903 LAG3P18627 525 aa16.02■□□□□ 0.16
PTPRA-205ENST00000399903 MPEG1Q2M385 716 aa16.02■□□□□ 0.16
PTPRA-205ENST00000399903 SYTL3Q4VX76 610 aa16.02■□□□□ 0.16
PTPRA-205ENST00000399903 SMARCD3Q6STE5 483 aa16.02■□□□□ 0.16
PTPRA-205ENST00000399903 LRRTM4Q86VH4 590 aa16.02■□□□□ 0.16
PTPRA-205ENST00000399903 KLHL36Q8N4N3 616 aa16.02■□□□□ 0.16
PTPRA-205ENST00000399903 OR5M3Q8NGP4 307 aa16.02■□□□□ 0.16
PTPRA-205ENST00000399903 WDR20Q8TBZ3 569 aa16.02■□□□□ 0.16
PTPRA-205ENST00000399903 CXorf36Q9H7Y0 433 aa16.02■□□□□ 0.16
PTPRA-205ENST00000399903 NFKBIL1Q9UBC1 381 aaPredicted RBP16.02■□□□□ 0.16
PTPRA-205ENST00000399903 PCDHGA9Q9Y5G4 932 aaKnown RBP16.02■□□□□ 0.16
PTPRA-205ENST00000399903 FXYD6-FXYD2A0A087WZ82 144 aa16.02■□□□□ 0.15
PTPRA-205ENST00000399903 KCNJ13O60928 360 aa16.02■□□□□ 0.15
PTPRA-205ENST00000399903 PRPH2P23942 346 aa16.02■□□□□ 0.15
PTPRA-205ENST00000399903 ACVR1BP36896 505 aa16.02■□□□□ 0.15
PTPRA-205ENST00000399903 VEGFCP49767 419 aa16.02■□□□□ 0.15
PTPRA-205ENST00000399903 B4GALNT1Q00973 533 aa16.02■□□□□ 0.15
PTPRA-205ENST00000399903 OR5D16Q8NGK9 328 aa16.02■□□□□ 0.15
PTPRA-205ENST00000399903 SMAP2Q8WU79 429 aaPredicted RBP16.02■□□□□ 0.15
PTPRA-205ENST00000399903 UQCC2Q9BRT2 126 aa16.02■□□□□ 0.15
PTPRA-205ENST00000399903 FXYD6Q9H0Q3 95 aa16.02■□□□□ 0.15
PTPRA-205ENST00000399903 CD93Q9NPY3 652 aa16.02■□□□□ 0.15
PTPRA-205ENST00000399903 ZMAT5Q9UDW3 170 aaKnown RBP16.02■□□□□ 0.15
PTPRA-205ENST00000399903 CHST2Q9Y4C5 530 aa16.02■□□□□ 0.15
PTPRA-205ENST00000399903 WNT6Q9Y6F9 365 aa16.02■□□□□ 0.15
PTPRA-205ENST00000399903 C7orf66A4D0T2 115 aa16.01■□□□□ 0.15
PTPRA-205ENST00000399903 TMEM202A6NGA9 273 aa16.01■□□□□ 0.15
PTPRA-205ENST00000399903 PGRMC2O15173 223 aa16.01■□□□□ 0.15
PTPRA-205ENST00000399903 FZD7O75084 574 aa16.01■□□□□ 0.15
PTPRA-205ENST00000399903 SLC16A8O95907 504 aa16.01■□□□□ 0.15
PTPRA-205ENST00000399903 TAP2Q03519 686 aa16.01■□□□□ 0.15
PTPRA-205ENST00000399903 DSG2Q14126 1118 aa16.01■□□□□ 0.15
PTPRA-205ENST00000399903 MELKQ14680 651 aa16.01■□□□□ 0.15
PTPRA-205ENST00000399903 PRSS53Q2L4Q9 553 aa16.01■□□□□ 0.15
PTPRA-205ENST00000399903 FAM198BQ6UWH4 519 aa16.01■□□□□ 0.15
PTPRA-205ENST00000399903 Q6ZTK2 550 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms