RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 PROKR2Q8NFJ6 384 aa13.14□□□□□ -0.31
SCAF4-202ENST00000399804 EFHD2Q96C19 240 aaPredicted RBP13.14□□□□□ -0.31
SCAF4-202ENST00000399804 WDR34Q96EX3 536 aa13.14□□□□□ -0.31
SCAF4-202ENST00000399804 CNRIP1Q96F85 164 aaPredicted RBP13.14□□□□□ -0.31
SCAF4-202ENST00000399804 USP36Q9P275 1121 aaKnown RBP13.14□□□□□ -0.31
SCAF4-202ENST00000399804 PROM1O43490 865 aa13.14□□□□□ -0.31
SCAF4-202ENST00000399804 RENP00797 406 aa13.14□□□□□ -0.31
SCAF4-202ENST00000399804 MTNR1AP48039 350 aa13.14□□□□□ -0.31
SCAF4-202ENST00000399804 OC90Q02509 493 aaPredicted RBP13.14□□□□□ -0.31
SCAF4-202ENST00000399804 CSTF1Q05048 431 aaKnown RBP13.14□□□□□ -0.31
SCAF4-202ENST00000399804 ZNF404Q494X3 552 aa13.14□□□□□ -0.31
SCAF4-202ENST00000399804 MFSD12Q6NUT3 480 aa13.14□□□□□ -0.31
SCAF4-202ENST00000399804 TMEM179BQ7Z7N9 219 aa13.14□□□□□ -0.31
SCAF4-202ENST00000399804 BAHD1Q8TBE0 780 aaPredicted RBP13.14□□□□□ -0.31
SCAF4-202ENST00000399804 ZNF559Q9BR84 538 aa13.14□□□□□ -0.31
SCAF4-202ENST00000399804 METTL7AQ9H8H3 244 aa13.14□□□□□ -0.31
SCAF4-202ENST00000399804 C19orf25Q9UFG5 118 aaPredicted RBP13.14□□□□□ -0.31
SCAF4-202ENST00000399804 PCDHGB7Q9Y5F8 929 aa13.14□□□□□ -0.31
SCAF4-202ENST00000399804 CEPT1Q9Y6K0 416 aa13.14□□□□□ -0.31
SCAF4-202ENST00000399804 ENTPD6O75354 484 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 TNFRSF21O75509 655 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 GIPRP48546 466 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 RORCP51449 518 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 ACY1Q03154 408 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 SLC3A1Q07837 685 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 MRPL2Q5T653 305 aaKnown RBP13.13□□□□□ -0.31
SCAF4-202ENST00000399804 UBASH3BQ8TF42 649 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 GAB3Q8WWW8 586 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 ASB12Q8WXK4 309 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 NTN4Q9HB63 628 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 CD93Q9NPY3 652 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 ZNF443Q9Y2A4 671 aaPredicted RBP13.13□□□□□ -0.31
SCAF4-202ENST00000399804 AHSA1O95433 338 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 MAGEA8P43361 318 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 GPR143P51810 404 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 PDX1P52945 283 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 BLVRAP53004 296 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 CXCR4P61073 352 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 TUBA1BP68363 451 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 INAVAQ3KP66 663 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 TUBA1AQ71U36 451 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 B3GNT7Q8NFL0 401 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 TMEM239Q8WW34 195 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 TRUB1Q8WWH5 349 aaKnown RBP13.13□□□□□ -0.31
SCAF4-202ENST00000399804 SGTBQ96EQ0 304 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 ADOQ96SZ5 270 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 BTBD2Q9BX70 525 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 ZNF304Q9HCX3 659 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 CSNK1G3Q9Y6M4 447 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 UNC13CQ8NB66 2214 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 H3BMQ9 156 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 SLC16A6O15403 523 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 ARHGEF9O43307 516 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 CDRT1O95170 752 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 STAT5AP42229 794 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 OR1D5P58170 312 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 MOGQ16653 247 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 KDM4DQ6B0I6 523 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 PLBD1Q6P4A8 553 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 ZNF793Q6ZN11 406 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 ZNF367Q7RTV3 350 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 FGD2Q7Z6J4 655 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 ZNF554Q86TJ5 538 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 PAQR7Q86WK9 346 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 ZNF595Q8IYB9 648 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 COG8Q96MW5 612 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 LPAR4Q99677 370 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 DEFB126Q9BYW3 111 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 PIGUQ9H490 435 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 PCDHGB1Q9Y5G3 927 aa13.13□□□□□ -0.31
SCAF4-202ENST00000399804 CDC14CA4D256 554 aa13.12□□□□□ -0.31
SCAF4-202ENST00000399804 TLCD2A6NGC4 264 aa13.12□□□□□ -0.31
SCAF4-202ENST00000399804 TFECO14948 347 aaPredicted RBP13.12□□□□□ -0.31
SCAF4-202ENST00000399804 TMEM64Q6YI46 380 aa13.12□□□□□ -0.31
SCAF4-202ENST00000399804 PAK1IP1Q9NWT1 392 aaPredicted RBP13.12□□□□□ -0.31
SCAF4-202ENST00000399804 C2orf92A0A1B0GVN3 265 aa13.12□□□□□ -0.31
SCAF4-202ENST00000399804 C11orf98E9PRG8 122 aa13.12□□□□□ -0.31
SCAF4-202ENST00000399804 LILRB5O75023 590 aa13.12□□□□□ -0.31
SCAF4-202ENST00000399804 C14orf28Q4W4Y0 310 aa13.12□□□□□ -0.31
SCAF4-202ENST00000399804 TMEM164Q5U3C3 297 aa13.12□□□□□ -0.31
SCAF4-202ENST00000399804 ADGRF3Q8IZF5 1079 aa13.12□□□□□ -0.31
SCAF4-202ENST00000399804 DEFB123Q8N688 67 aa13.12□□□□□ -0.31
SCAF4-202ENST00000399804 CYB561A3Q8NBI2 242 aa13.12□□□□□ -0.31
SCAF4-202ENST00000399804 BARD1Q99728 777 aaKnown RBP13.12□□□□□ -0.31
SCAF4-202ENST00000399804 NAA50Q9GZZ1 169 aaKnown RBP13.12□□□□□ -0.31
SCAF4-202ENST00000399804 NANSQ9NR45 359 aa13.12□□□□□ -0.31
SCAF4-202ENST00000399804 FGF21Q9NSA1 209 aa13.12□□□□□ -0.31
SCAF4-202ENST00000399804 MALT1Q9UDY8 824 aa13.12□□□□□ -0.31
SCAF4-202ENST00000399804 PPIEQ9UNP9 301 aaKnown RBP13.12□□□□□ -0.31
SCAF4-202ENST00000399804 EXOSC1Q9Y3B2 195 aaKnown RBP13.12□□□□□ -0.31
SCAF4-202ENST00000399804 SPTBP11277 2137 aa13.12□□□□□ -0.31
SCAF4-202ENST00000399804 FGF17O60258 216 aa13.12□□□□□ -0.31
SCAF4-202ENST00000399804 BCAS1O75363 584 aaPredicted RBP13.12□□□□□ -0.31
SCAF4-202ENST00000399804 RPP14O95059 124 aaKnown RBP13.12□□□□□ -0.31
SCAF4-202ENST00000399804 HLA-DPB1P04440 258 aa13.12□□□□□ -0.31
SCAF4-202ENST00000399804 SSTR4P31391 388 aa13.12□□□□□ -0.31
SCAF4-202ENST00000399804 GBX2P52951 348 aaPredicted RBP13.12□□□□□ -0.31
SCAF4-202ENST00000399804 TAB1Q15750 504 aa13.12□□□□□ -0.31
SCAF4-202ENST00000399804 CAMKMTQ7Z624 323 aa13.12□□□□□ -0.31
SCAF4-202ENST00000399804 CPOQ8IVL8 374 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms