RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.17□□□□□ -0.46
VCX3A-202ENST00000398729 L3MBTL1Q9Y468 752 aa12.17□□□□□ -0.46
VCX3A-202ENST00000398729 V9GYY5 206 aaPredicted RBP12.17□□□□□ -0.46
VCX3A-202ENST00000398729 TYROBPO43914 113 aa12.16□□□□□ -0.46
VCX3A-202ENST00000398729 ZNF500O60304 480 aaPredicted RBP12.16□□□□□ -0.46
VCX3A-202ENST00000398729 FADS1O60427 444 aa12.16□□□□□ -0.46
VCX3A-202ENST00000398729 ZWINTO95229 277 aa12.16□□□□□ -0.46
VCX3A-202ENST00000398729 KCNH1O95259 989 aa12.16□□□□□ -0.46
VCX3A-202ENST00000398729 BPGMP07738 259 aa12.16□□□□□ -0.46
VCX3A-202ENST00000398729 BCKDHAP12694 445 aa12.16□□□□□ -0.46
VCX3A-202ENST00000398729 CREB1P16220 341 aa12.16□□□□□ -0.46
VCX3A-202ENST00000398729 TCEA1P23193 301 aaKnown RBP12.16□□□□□ -0.46
VCX3A-202ENST00000398729 CHMP24386 653 aa12.16□□□□□ -0.46
VCX3A-202ENST00000398729 CTSSP25774 331 aa12.16□□□□□ -0.46
VCX3A-202ENST00000398729 OPRM1P35372 400 aa12.16□□□□□ -0.46
VCX3A-202ENST00000398729 HPCAL1P37235 193 aa12.16□□□□□ -0.46
VCX3A-202ENST00000398729 RPL3P39023 403 aaKnown RBP12.16□□□□□ -0.46
VCX3A-202ENST00000398729 FRKP42685 505 aaPredicted RBP12.16□□□□□ -0.46
VCX3A-202ENST00000398729 LHX2P50458 406 aa12.16□□□□□ -0.46
VCX3A-202ENST00000398729 DGKQP52824 942 aa12.16□□□□□ -0.46
VCX3A-202ENST00000398729 IST1P53990 364 aa12.16□□□□□ -0.46
VCX3A-202ENST00000398729 PRKAG1P54619 331 aa12.16□□□□□ -0.46
VCX3A-202ENST00000398729 KRT71Q3SY84 523 aa12.16□□□□□ -0.46
VCX3A-202ENST00000398729 VPS26BQ4G0F5 336 aa12.16□□□□□ -0.46
VCX3A-202ENST00000398729 LRIG3Q6UXM1 1119 aa12.16□□□□□ -0.46
VCX3A-202ENST00000398729 SZRD1Q7Z422 152 aa12.16□□□□□ -0.46
VCX3A-202ENST00000398729 CDRT4Q8N9R6 151 aa12.16□□□□□ -0.46
VCX3A-202ENST00000398729 GPR151Q8TDV0 419 aa12.16□□□□□ -0.46
VCX3A-202ENST00000398729 RNASE6Q93091 150 aaKnown RBP12.16□□□□□ -0.46
VCX3A-202ENST00000398729 TM9SF2Q99805 663 aa12.16□□□□□ -0.46
VCX3A-202ENST00000398729 TUBA1CQ9BQE3 449 aa12.16□□□□□ -0.46
VCX3A-202ENST00000398729 DSN1Q9H410 356 aa12.16□□□□□ -0.46
VCX3A-202ENST00000398729 PTGES2Q9H7Z7 377 aa12.16□□□□□ -0.46
VCX3A-202ENST00000398729 FLRT3Q9NZU0 649 aa12.16□□□□□ -0.46
VCX3A-202ENST00000398729 NTMQ9P121 344 aa12.16□□□□□ -0.46
VCX3A-202ENST00000398729 FOXD3Q9UJU5 478 aaPredicted RBP12.16□□□□□ -0.46
VCX3A-202ENST00000398729 RPH3AQ9Y2J0 694 aaPredicted RBP12.16□□□□□ -0.46
VCX3A-202ENST00000398729 KIAA1549Q9HCM3 1950 aa12.16□□□□□ -0.46
VCX3A-202ENST00000398729 NSD1Q96L73 2696 aaPredicted RBP12.15□□□□□ -0.46
VCX3A-202ENST00000398729 FAM221AA4D161 298 aa12.15□□□□□ -0.46
VCX3A-202ENST00000398729 RGS16O15492 202 aaPredicted RBP12.15□□□□□ -0.46
VCX3A-202ENST00000398729 ZIC3O60481 467 aa12.15□□□□□ -0.46
VCX3A-202ENST00000398729 PEX11AO75192 247 aa12.15□□□□□ -0.46
VCX3A-202ENST00000398729 IL18BPO95998 194 aa12.15□□□□□ -0.46
VCX3A-202ENST00000398729 TMIGD3P0DMS9 266 aaPredicted RBP12.15□□□□□ -0.46
VCX3A-202ENST00000398729 ETV4P43268 484 aa12.15□□□□□ -0.46
VCX3A-202ENST00000398729 KIR2DL3P43628 341 aa12.15□□□□□ -0.46
VCX3A-202ENST00000398729 STARP49675 285 aa12.15□□□□□ -0.46
VCX3A-202ENST00000398729 STX5Q13190 355 aa12.15□□□□□ -0.46
VCX3A-202ENST00000398729 GANABQ14697 944 aaKnown RBP12.15□□□□□ -0.46
VCX3A-202ENST00000398729 FBXL19-AS1Q494R0 122 aa12.15□□□□□ -0.46
VCX3A-202ENST00000398729 ATP6AP1LQ52LC2 224 aa12.15□□□□□ -0.46
VCX3A-202ENST00000398729 XKR7Q5GH72 579 aa12.15□□□□□ -0.46
VCX3A-202ENST00000398729 POMZP3Q6PJE2 187 aa12.15□□□□□ -0.46
VCX3A-202ENST00000398729 TMEM200AQ86VY9 491 aa12.15□□□□□ -0.46
VCX3A-202ENST00000398729 NUDCD3Q8IVD9 361 aa12.15□□□□□ -0.46
VCX3A-202ENST00000398729 FADS6Q8N9I5 356 aa12.15□□□□□ -0.46
VCX3A-202ENST00000398729 C9orf106Q8NAJ2 232 aa12.15□□□□□ -0.46
VCX3A-202ENST00000398729 NUP43Q8NFH3 380 aa12.15□□□□□ -0.46
VCX3A-202ENST00000398729 OR2M3Q8NG83 312 aa12.15□□□□□ -0.46
VCX3A-202ENST00000398729 PPP1R14CQ8TAE6 165 aa12.15□□□□□ -0.46
VCX3A-202ENST00000398729 PIK3R3Q92569 461 aa12.15□□□□□ -0.46
VCX3A-202ENST00000398729 SLC9A6Q92581 669 aa12.15□□□□□ -0.46
VCX3A-202ENST00000398729 HOXB13Q92826 284 aaPredicted RBP12.15□□□□□ -0.46
VCX3A-202ENST00000398729 RMND5BQ96G75 393 aaPredicted RBP12.15□□□□□ -0.46
VCX3A-202ENST00000398729 ZFP3Q96NJ6 502 aa12.15□□□□□ -0.46
VCX3A-202ENST00000398729 MS4A4EQ96PG1 132 aa12.15□□□□□ -0.46
VCX3A-202ENST00000398729 UCN2Q96RP3 112 aa12.15□□□□□ -0.46
VCX3A-202ENST00000398729 SH3GL2Q99962 352 aa12.15□□□□□ -0.46
VCX3A-202ENST00000398729 PARD6BQ9BYG5 372 aa12.15□□□□□ -0.46
VCX3A-202ENST00000398729 TBL1XR1Q9BZK7 514 aa12.15□□□□□ -0.46
VCX3A-202ENST00000398729 CXXC4Q9H2H0 198 aa12.15□□□□□ -0.46
VCX3A-202ENST00000398729 MED11Q9P086 117 aa12.15□□□□□ -0.46
VCX3A-202ENST00000398729 ATP6V1HQ9UI12 483 aa12.15□□□□□ -0.46
VCX3A-202ENST00000398729 ZDHHC2Q9UIJ5 367 aa12.15□□□□□ -0.46
VCX3A-202ENST00000398729 DOCK7Q96N67 2140 aa12.14□□□□□ -0.47
VCX3A-202ENST00000398729 MED12Q93074 2177 aa12.14□□□□□ -0.47
VCX3A-202ENST00000398729 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.14□□□□□ -0.47
VCX3A-202ENST00000398729 GXYLT2A0PJZ3 443 aa12.14□□□□□ -0.47
VCX3A-202ENST00000398729 CLCA1A8K7I4 914 aa12.14□□□□□ -0.47
VCX3A-202ENST00000398729 C17orf51A8MQB3 221 aa12.14□□□□□ -0.47
VCX3A-202ENST00000398729 B4DXG7 233 aa12.14□□□□□ -0.47
VCX3A-202ENST00000398729 EEF1E1-BLOC1S5C9J1V9 151 aa12.14□□□□□ -0.47
VCX3A-202ENST00000398729 SCAMP2O15127 329 aaKnown RBP12.14□□□□□ -0.47
VCX3A-202ENST00000398729 CTIFO43310 598 aaKnown RBP12.14□□□□□ -0.47
VCX3A-202ENST00000398729 EEF1E1O43324 174 aaKnown RBP12.14□□□□□ -0.47
VCX3A-202ENST00000398729 EMC8O43402 210 aa12.14□□□□□ -0.47
VCX3A-202ENST00000398729 SKAP2O75563 359 aaPredicted RBP12.14□□□□□ -0.47
VCX3A-202ENST00000398729 LYPLA1O75608 230 aaPredicted RBP12.14□□□□□ -0.47
VCX3A-202ENST00000398729 NKX2-2O95096 273 aa12.14□□□□□ -0.47
VCX3A-202ENST00000398729 UTS2O95399 124 aa12.14□□□□□ -0.47
VCX3A-202ENST00000398729 PEPDP12955 493 aa12.14□□□□□ -0.47
VCX3A-202ENST00000398729 ZNF708P17019 499 aa12.14□□□□□ -0.47
VCX3A-202ENST00000398729 HK1P19367 917 aa12.14□□□□□ -0.47
VCX3A-202ENST00000398729 ARRB2P32121 409 aa12.14□□□□□ -0.47
VCX3A-202ENST00000398729 MAP3K8P41279 467 aa12.14□□□□□ -0.47
VCX3A-202ENST00000398729 CLDN18P56856 261 aa12.14□□□□□ -0.47
VCX3A-202ENST00000398729 PRR5P85299 388 aa12.14□□□□□ -0.47
VCX3A-202ENST00000398729 ZNF844Q08AG5 666 aa12.14□□□□□ -0.47
VCX3A-202ENST00000398729 C17orf67Q0P5P2 114 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms