RNA–Protein interactions for RNA: ENST00000398529.7

RAB1A-201, Transcript of RAB1A, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB1A, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1A-201ENST00000398529 NPIPB8E9PQR5 432 aa13□□□□□ -0.33
RAB1A-201ENST00000398529 SLCO1B7G3V0H7 640 aa13□□□□□ -0.33
RAB1A-201ENST00000398529 HDAC3O15379 428 aa13□□□□□ -0.33
RAB1A-201ENST00000398529 EDF1O60869 148 aaKnown RBP13□□□□□ -0.33
RAB1A-201ENST00000398529 CBR3O75828 277 aa13□□□□□ -0.33
RAB1A-201ENST00000398529 ABCD3P28288 659 aa13□□□□□ -0.33
RAB1A-201ENST00000398529 SNTA1Q13424 505 aa13□□□□□ -0.33
RAB1A-201ENST00000398529 XKR7Q5GH72 579 aa13□□□□□ -0.33
RAB1A-201ENST00000398529 SPDYAQ5MJ70 313 aa13□□□□□ -0.33
RAB1A-201ENST00000398529 FNDC7Q5VTL7 733 aa13□□□□□ -0.33
RAB1A-201ENST00000398529 OR2A2Q6IF42 318 aa13□□□□□ -0.33
RAB1A-201ENST00000398529 PAGE2Q7Z2X7 111 aa13□□□□□ -0.33
RAB1A-201ENST00000398529 COMMD6Q7Z4G1 85 aa13□□□□□ -0.33
RAB1A-201ENST00000398529 IFNEQ86WN2 208 aa13□□□□□ -0.33
RAB1A-201ENST00000398529 NUDT13Q86X67 352 aa13□□□□□ -0.33
RAB1A-201ENST00000398529 WDR75Q8IWA0 830 aaKnown RBP13□□□□□ -0.33
RAB1A-201ENST00000398529 PRR22Q8IZ63 422 aa13□□□□□ -0.33
RAB1A-201ENST00000398529 GCNT2Q8N0V5 402 aa13□□□□□ -0.33
RAB1A-201ENST00000398529 CIARTQ8N365 385 aaPredicted RBP13□□□□□ -0.33
RAB1A-201ENST00000398529 C1orf52Q8N6N3 182 aaKnown RBP13□□□□□ -0.33
RAB1A-201ENST00000398529 C17orf47Q8NEP4 570 aa13□□□□□ -0.33
RAB1A-201ENST00000398529 PIK3IP1Q96FE7 263 aa13□□□□□ -0.33
RAB1A-201ENST00000398529 C3orf30Q96M34 536 aa13□□□□□ -0.33
RAB1A-201ENST00000398529 DDX31Q9H8H2 851 aaKnown RBP13□□□□□ -0.33
RAB1A-201ENST00000398529 ADAM29Q9UKF5 820 aa13□□□□□ -0.33
RAB1A-201ENST00000398529 TESMINQ9Y4I5 508 aa13□□□□□ -0.33
RAB1A-201ENST00000398529 A0A0A6YYD5 115 aa12.99□□□□□ -0.33
RAB1A-201ENST00000398529 A0A1W2PR48 441 aa12.99□□□□□ -0.33
RAB1A-201ENST00000398529 MSTNO14793 375 aa12.99□□□□□ -0.33
RAB1A-201ENST00000398529 EEDO75530 441 aaKnown RBP12.99□□□□□ -0.33
RAB1A-201ENST00000398529 PPM1BO75688 479 aa12.99□□□□□ -0.33
RAB1A-201ENST00000398529 CRHP06850 196 aa12.99□□□□□ -0.33
RAB1A-201ENST00000398529 ABCB1P08183 1280 aaPredicted RBP12.99□□□□□ -0.33
RAB1A-201ENST00000398529 NT5EP21589 574 aa12.99□□□□□ -0.33
RAB1A-201ENST00000398529 MC3RP41968 323 aa12.99□□□□□ -0.33
RAB1A-201ENST00000398529 KCNJ5P48544 419 aa12.99□□□□□ -0.33
RAB1A-201ENST00000398529 GYS2P54840 703 aa12.99□□□□□ -0.33
RAB1A-201ENST00000398529 ACSM2AQ08AH3 577 aa12.99□□□□□ -0.33
RAB1A-201ENST00000398529 SPIN4Q56A73 249 aa12.99□□□□□ -0.33
RAB1A-201ENST00000398529 ACSM2BQ68CK6 577 aa12.99□□□□□ -0.33
RAB1A-201ENST00000398529 OR4K14Q8NGD5 310 aa12.99□□□□□ -0.33
RAB1A-201ENST00000398529 METTL2AQ96IZ6 378 aaKnown RBP12.99□□□□□ -0.33
RAB1A-201ENST00000398529 PPP1R36Q96LQ0 422 aa12.99□□□□□ -0.33
RAB1A-201ENST00000398529 UCN2Q96RP3 112 aa12.99□□□□□ -0.33
RAB1A-201ENST00000398529 OSBPL11Q9BXB4 747 aa12.99□□□□□ -0.33
RAB1A-201ENST00000398529 NUF2Q9BZD4 464 aa12.99□□□□□ -0.33
RAB1A-201ENST00000398529 MEAF6Q9HAF1 191 aa12.99□□□□□ -0.33
RAB1A-201ENST00000398529 LRTM1Q9HBL6 345 aa12.99□□□□□ -0.33
RAB1A-201ENST00000398529 SERHLQ9NQF3 203 aa12.99□□□□□ -0.33
RAB1A-201ENST00000398529 C1orf109Q9NX04 203 aa12.99□□□□□ -0.33
RAB1A-201ENST00000398529 SIRT5Q9NXA8 310 aa12.99□□□□□ -0.33
RAB1A-201ENST00000398529 KLHL28Q9NXS3 571 aa12.99□□□□□ -0.33
RAB1A-201ENST00000398529 BCAP29Q9UHQ4 241 aa12.99□□□□□ -0.33
RAB1A-201ENST00000398529 MAPRE3Q9UPY8 281 aa12.99□□□□□ -0.33
RAB1A-201ENST00000398529 EXO1Q9UQ84 846 aaKnown RBP12.99□□□□□ -0.33
RAB1A-201ENST00000398529 ASB4Q9Y574 426 aa12.99□□□□□ -0.33
RAB1A-201ENST00000398529 USH1CQ9Y6N9 552 aa12.99□□□□□ -0.33
RAB1A-201ENST00000398529 A0A1W2PPR1 153 aa12.98□□□□□ -0.33
RAB1A-201ENST00000398529 TRIM64A6NGJ6 449 aa12.98□□□□□ -0.33
RAB1A-201ENST00000398529 TRIM64BA6NI03 449 aa12.98□□□□□ -0.33
RAB1A-201ENST00000398529 TRPC5OSA6NMA1 111 aa12.98□□□□□ -0.33
RAB1A-201ENST00000398529 SDHDO14521 159 aa12.98□□□□□ -0.33
RAB1A-201ENST00000398529 ZNF195O14628 629 aa12.98□□□□□ -0.33
RAB1A-201ENST00000398529 SNPHO15079 494 aa12.98□□□□□ -0.33
RAB1A-201ENST00000398529 LSM1O15116 133 aaKnown RBP12.98□□□□□ -0.33
RAB1A-201ENST00000398529 POLR3GO15318 223 aaPredicted RBP12.98□□□□□ -0.33
RAB1A-201ENST00000398529 TMPRSS11DO60235 418 aa12.98□□□□□ -0.33
RAB1A-201ENST00000398529 SEC22BO75396 215 aa12.98□□□□□ -0.33
RAB1A-201ENST00000398529 AIFM1O95831 613 aa12.98□□□□□ -0.33
RAB1A-201ENST00000398529 GBAP04062 536 aa12.98□□□□□ -0.33
RAB1A-201ENST00000398529 KLK1P06870 262 aa12.98□□□□□ -0.33
RAB1A-201ENST00000398529 XKP51811 444 aa12.98□□□□□ -0.33
RAB1A-201ENST00000398529 RAE1P78406 368 aaKnown RBP12.98□□□□□ -0.33
RAB1A-201ENST00000398529 FUT7Q11130 342 aa12.98□□□□□ -0.33
RAB1A-201ENST00000398529 KIAA0040Q15053 153 aa12.98□□□□□ -0.33
RAB1A-201ENST00000398529 GALNTL6Q49A17 601 aa12.98□□□□□ -0.33
RAB1A-201ENST00000398529 CCNYL2Q5T2Q4 361 aa12.98□□□□□ -0.33
RAB1A-201ENST00000398529 MRM1Q6IN84 353 aaKnown RBP12.98□□□□□ -0.33
RAB1A-201ENST00000398529 MAVSQ7Z434 540 aa12.98□□□□□ -0.33
RAB1A-201ENST00000398529 CNEP1R1Q8N9A8 125 aa12.98□□□□□ -0.33
RAB1A-201ENST00000398529 ADIPOR1Q96A54 375 aa12.98□□□□□ -0.33
RAB1A-201ENST00000398529 TUBGCP3Q96CW5 907 aa12.98□□□□□ -0.33
RAB1A-201ENST00000398529 TMCO6Q96DC7 493 aa12.98□□□□□ -0.33
RAB1A-201ENST00000398529 C11orf24Q96F05 449 aaPredicted RBP12.98□□□□□ -0.33
RAB1A-201ENST00000398529 PPP3R2Q96LZ3 170 aa12.98□□□□□ -0.33
RAB1A-201ENST00000398529 WFIKKN1Q96NZ8 548 aa12.98□□□□□ -0.33
RAB1A-201ENST00000398529 TAS2R10Q9NYW0 307 aa12.98□□□□□ -0.33
RAB1A-201ENST00000398529 GIMAP2Q9UG22 337 aa12.98□□□□□ -0.33
RAB1A-201ENST00000398529 MCM8Q9UJA3 840 aa12.98□□□□□ -0.33
RAB1A-201ENST00000398529 DLGAP4Q9Y2H0 992 aa12.98□□□□□ -0.33
RAB1A-201ENST00000398529 MED12Q93074 2177 aa12.98□□□□□ -0.33
RAB1A-201ENST00000398529 WASHC1A8K0Z3 465 aa12.97□□□□□ -0.33
RAB1A-201ENST00000398529 ACOX3O15254 700 aa12.97□□□□□ -0.33
RAB1A-201ENST00000398529 PCDH7O60245 1069 aa12.97□□□□□ -0.33
RAB1A-201ENST00000398529 ICOSLGO75144 302 aa12.97□□□□□ -0.33
RAB1A-201ENST00000398529 PEX11AO75192 247 aa12.97□□□□□ -0.33
RAB1A-201ENST00000398529 GUCY1B2O75343 617 aa12.97□□□□□ -0.33
RAB1A-201ENST00000398529 CLPSP04118 112 aa12.97□□□□□ -0.33
RAB1A-201ENST00000398529 VIMP08670 466 aaKnown RBP12.97□□□□□ -0.33
RAB1A-201ENST00000398529 PORP16435 677 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms