RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 APOBEC3BQ9UH17 382 aaKnown RBP4.64□□□□□ -1.67
SMAD4-202ENST00000398417 DIMT1Q9UNQ2 313 aaKnown RBP4.64□□□□□ -1.67
SMAD4-202ENST00000398417 SIPA1L1O43166 1804 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 ISPDA4D126 451 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 PLOD3O60568 738 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 TIMP1P01033 207 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 FCER2P06734 321 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 THEGLP0DJG4 465 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 PSKH1P11801 424 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 DRD2P14416 443 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 CELP19835 753 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 MC3RP41968 323 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 RBM34P42696 430 aaKnown RBP4.64□□□□□ -1.67
SMAD4-202ENST00000398417 SNRPD2P62316 118 aaKnown RBP4.64□□□□□ -1.67
SMAD4-202ENST00000398417 RNF44Q7L0R7 432 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 LAS2Q8IYD9 372 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 ZNF671Q8TAW3 534 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 TMEM163Q8TC26 289 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 SLC35A4Q96G79 324 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 RAD9AQ99638 391 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 CCDC3Q9BQI4 270 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 WFDC6Q9BQY6 131 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 TRAF4Q9BUZ4 470 aaPredicted RBP4.64□□□□□ -1.67
SMAD4-202ENST00000398417 PCBD2Q9H0N5 130 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 GPATCH2Q9NW75 528 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 PAQR5Q9NXK6 330 aaPredicted RBP4.64□□□□□ -1.67
SMAD4-202ENST00000398417 TMEM5Q9Y2B1 443 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 ZAR1LA6NP61 321 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 H3BSH0 61 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 HMGN4O00479 90 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 SOCS6O14544 535 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 MID1O15344 667 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 GHRHP01286 108 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 SDHBP21912 280 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 SOX18P35713 384 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 GIPRP48546 466 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 CSNK1G2P78368 415 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 IRF4Q15306 451 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 RPE65Q16518 533 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 HNRNPA1L2Q32P51 320 aaKnown RBP4.64□□□□□ -1.67
SMAD4-202ENST00000398417 ATAD3CQ5T2N8 411 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 LYRM7Q5U5X0 104 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 MTFR2Q6P444 385 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 PLBD1Q6P4A8 553 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 FAM111BQ6SJ93 734 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 LAX1Q8IWV1 398 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 CCDC36Q8IYA8 594 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 PEX5LQ8IYB4 626 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 TBC1D20Q96BZ9 403 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 ZNF582Q96NG8 517 aaPredicted RBP4.64□□□□□ -1.67
SMAD4-202ENST00000398417 GAS2L1Q99501 681 aaPredicted RBP4.64□□□□□ -1.67
SMAD4-202ENST00000398417 GLIPR2Q9H4G4 154 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 CPNE5Q9HCH3 593 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 A4GALTQ9NPC4 353 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 PLCXD1Q9NUJ7 323 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 NLKQ9UBE8 527 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 NAALAD2Q9Y3Q0 740 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 PCDHGB1Q9Y5G3 927 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 SERTM1A2A2V5 107 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 B3GALT2O43825 422 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 CPNE3O75131 537 aaKnown RBP4.64□□□□□ -1.67
SMAD4-202ENST00000398417 HLA-DPB1P04440 258 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 HNRNPA1P09651 372 aaKnown RBP eCLIP4.64□□□□□ -1.67
SMAD4-202ENST00000398417 PVRP15151 417 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 TCEA1P23193 301 aaKnown RBP4.64□□□□□ -1.67
SMAD4-202ENST00000398417 BSGP35613 385 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 CST6Q15828 149 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 BAK1Q16611 211 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 TP53I3Q53FA7 332 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 FAM78AQ5JUQ0 283 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.64□□□□□ -1.67
SMAD4-202ENST00000398417 ASPGQ86U10 573 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 CPOQ8IVL8 374 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 NATD1Q8N6N6 113 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 KCT2Q8NC54 265 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 ASB15Q8WXK1 588 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 SMARCD2Q92925 531 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 APOOQ9BUR5 198 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 SLIRPQ9GZT3 109 aaKnown RBP4.64□□□□□ -1.67
SMAD4-202ENST00000398417 TRPV5Q9NQA5 729 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 FBXL12Q9NXK8 326 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 IRGMA1A4Y4 181 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 INMT-MINDY4F8WBC2 141 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 KRT33AO76009 404 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 CISD3P0C7P0 127 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 LAMP2P13473 410 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 DCDC1P59894 354 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 CSTF1Q05048 431 aaKnown RBP4.64□□□□□ -1.67
SMAD4-202ENST00000398417 HYAL2Q12891 473 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 SSX1Q16384 188 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 C12orf73Q69YU5 71 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 CDC73Q6P1J9 531 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 FCRL1Q96LA6 429 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 POLDIP3Q9BY77 421 aaKnown RBP4.64□□□□□ -1.67
SMAD4-202ENST00000398417 ENAMQ9NRM1 1142 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 SPHK1Q9NYA1 384 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 MAFFQ9ULX9 164 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 TSPAN11A1L157 253 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 AIFM1O95831 613 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 GUCA1AP43080 201 aaPredicted RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms