RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 PHC1P78364 1004 aa13.03□□□□□ -0.32
HDDC2-202ENST00000398153 C17orf67Q0P5P2 114 aa13.03□□□□□ -0.32
HDDC2-202ENST00000398153 SF3B4Q15427 424 aaKnown RBP eCLIP13.03□□□□□ -0.322e-7■■■■■ 35.3
HDDC2-202ENST00000398153 DUSP5Q16690 384 aa13.03□□□□□ -0.32
HDDC2-202ENST00000398153 WLSQ5T9L3 541 aa13.03□□□□□ -0.32
HDDC2-202ENST00000398153 DESI1Q6ICB0 168 aa13.03□□□□□ -0.32
HDDC2-202ENST00000398153 TMEM211Q6ICI0 200 aa13.03□□□□□ -0.32
HDDC2-202ENST00000398153 C6orf120Q7Z4R8 191 aa13.03□□□□□ -0.32
HDDC2-202ENST00000398153 WDR53Q7Z5U6 358 aaPredicted RBP13.03□□□□□ -0.32
HDDC2-202ENST00000398153 CLECL1Q8IZS7 167 aa13.03□□□□□ -0.32
HDDC2-202ENST00000398153 MIER2Q8N344 545 aa13.03□□□□□ -0.32
HDDC2-202ENST00000398153 WDSUB1Q8N9V3 476 aa13.03□□□□□ -0.32
HDDC2-202ENST00000398153 NUDT8Q8WV74 236 aa13.03□□□□□ -0.32
HDDC2-202ENST00000398153 PIK3R3Q92569 461 aa13.03□□□□□ -0.32
HDDC2-202ENST00000398153 JADE3Q92613 823 aa13.03□□□□□ -0.32
HDDC2-202ENST00000398153 C16orf58Q96GQ5 468 aa13.03□□□□□ -0.32
HDDC2-202ENST00000398153 TEX37Q96LM6 180 aa13.03□□□□□ -0.32
HDDC2-202ENST00000398153 OR52B2Q96RD2 323 aa13.03□□□□□ -0.32
HDDC2-202ENST00000398153 OR52E6Q96RD3 313 aa13.03□□□□□ -0.32
HDDC2-202ENST00000398153 HOXD1Q9GZZ0 328 aa13.03□□□□□ -0.32
HDDC2-202ENST00000398153 EXO5Q9H790 373 aa13.03□□□□□ -0.32
HDDC2-202ENST00000398153 GALNT9Q9HCQ5 603 aa13.03□□□□□ -0.32
HDDC2-202ENST00000398153 UBQLN4Q9NRR5 601 aa13.03□□□□□ -0.32
HDDC2-202ENST00000398153 TINAGQ9UJW2 476 aa13.03□□□□□ -0.32
HDDC2-202ENST00000398153 COL12A1Q99715 3063 aa13.03□□□□□ -0.32
HDDC2-202ENST00000398153 NUP214P35658 2090 aaPredicted RBP13.02□□□□□ -0.33
HDDC2-202ENST00000398153 GXYLT2A0PJZ3 443 aa13.02□□□□□ -0.33
HDDC2-202ENST00000398153 ALG1L2C9J202 215 aa13.02□□□□□ -0.33
HDDC2-202ENST00000398153 GNB5O14775 395 aa13.02□□□□□ -0.33
HDDC2-202ENST00000398153 TRAPPC6AO75865 159 aa13.02□□□□□ -0.33
HDDC2-202ENST00000398153 UTS2O95399 124 aa13.02□□□□□ -0.33
HDDC2-202ENST00000398153 GUSBP08236 651 aa13.02□□□□□ -0.33
HDDC2-202ENST00000398153 CELA3AP09093 270 aa13.02□□□□□ -0.33
HDDC2-202ENST00000398153 GABRA1P14867 456 aa13.02□□□□□ -0.33
HDDC2-202ENST00000398153 SRD5A2P31213 254 aa13.02□□□□□ -0.33
HDDC2-202ENST00000398153 MAGEA8P43361 318 aa13.02□□□□□ -0.33
HDDC2-202ENST00000398153 IDH3AP50213 366 aa13.02□□□□□ -0.33
HDDC2-202ENST00000398153 SMSP52788 366 aa13.02□□□□□ -0.33
HDDC2-202ENST00000398153 AQP5P55064 265 aa13.02□□□□□ -0.33
HDDC2-202ENST00000398153 STX1BP61266 288 aa13.02□□□□□ -0.33
HDDC2-202ENST00000398153 GANABQ14697 944 aaKnown RBP13.02□□□□□ -0.33
HDDC2-202ENST00000398153 GXYLT1Q4G148 440 aa13.02□□□□□ -0.33
HDDC2-202ENST00000398153 AP1ARQ63HQ0 302 aa13.02□□□□□ -0.33
HDDC2-202ENST00000398153 XKRXQ6PP77 449 aa13.02□□□□□ -0.33
HDDC2-202ENST00000398153 CD163Q86VB7 1156 aa13.02□□□□□ -0.33
HDDC2-202ENST00000398153 MISPQ8IVT2 679 aa13.02□□□□□ -0.33
HDDC2-202ENST00000398153 PM20D2Q8IYS1 436 aa13.02□□□□□ -0.33
HDDC2-202ENST00000398153 OIT3Q8WWZ8 545 aa13.02□□□□□ -0.33
HDDC2-202ENST00000398153 PANX1Q96RD7 426 aa13.02□□□□□ -0.33
HDDC2-202ENST00000398153 TBL1XR1Q9BZK7 514 aa13.02□□□□□ -0.33
HDDC2-202ENST00000398153 PTGES2Q9H7Z7 377 aa13.02□□□□□ -0.33
HDDC2-202ENST00000398153 RMND5AQ9H871 391 aa13.02□□□□□ -0.33
HDDC2-202ENST00000398153 EXD2Q9NVH0 621 aa13.02□□□□□ -0.33
HDDC2-202ENST00000398153 PPP4R1LQ9P1A2 415 aa13.02□□□□□ -0.33
HDDC2-202ENST00000398153 ACAD8Q9UKU7 415 aa13.02□□□□□ -0.33
HDDC2-202ENST00000398153 ZNF407Q9C0G0 2248 aa13.01□□□□□ -0.33
HDDC2-202ENST00000398153 IGLV3-32A0A0A0MS00 114 aa13.01□□□□□ -0.33
HDDC2-202ENST00000398153 RNF103-CHMP3A0A140T963 221 aa13.01□□□□□ -0.33
HDDC2-202ENST00000398153 A0A1W2PQD3 144 aa13.01□□□□□ -0.33
HDDC2-202ENST00000398153 FAM234BA2RU67 622 aa13.01□□□□□ -0.33
HDDC2-202ENST00000398153 NPIPA2E9PIF3 369 aa13.01□□□□□ -0.33
HDDC2-202ENST00000398153 NPIPA3F8WFD2 350 aa13.01□□□□□ -0.33
HDDC2-202ENST00000398153 LINC01387J3KSC0 135 aa13.01□□□□□ -0.33
HDDC2-202ENST00000398153 EDF1O60869 148 aaKnown RBP13.01□□□□□ -0.33
HDDC2-202ENST00000398153 ACTL6AO96019 429 aa13.01□□□□□ -0.33
HDDC2-202ENST00000398153 IGKV1D-16P01601 117 aa13.01□□□□□ -0.33
HDDC2-202ENST00000398153 HPGDP15428 266 aa13.01□□□□□ -0.33
HDDC2-202ENST00000398153 ENDOUP21128 410 aaKnown RBP13.01□□□□□ -0.33
HDDC2-202ENST00000398153 ATP6V1C1P21283 382 aa13.01□□□□□ -0.33
HDDC2-202ENST00000398153 MATN1P21941 496 aa13.01□□□□□ -0.33
HDDC2-202ENST00000398153 MSX1P28360 303 aa13.01□□□□□ -0.33
HDDC2-202ENST00000398153 IL12AP29459 219 aa13.01□□□□□ -0.33
HDDC2-202ENST00000398153 SOAT1P35610 550 aa13.01□□□□□ -0.33
HDDC2-202ENST00000398153 ANXA11P50995 505 aaKnown RBP13.01□□□□□ -0.33
HDDC2-202ENST00000398153 DSCR4P56555 118 aaPredicted RBP13.01□□□□□ -0.33
HDDC2-202ENST00000398153 NME5P56597 212 aa13.01□□□□□ -0.33
HDDC2-202ENST00000398153 TOMM20Q15388 145 aa13.01□□□□□ -0.33
HDDC2-202ENST00000398153 GLYR1Q49A26 553 aaPredicted RBP13.01□□□□□ -0.33
HDDC2-202ENST00000398153 SAXO2Q658L1 398 aa13.01□□□□□ -0.33
HDDC2-202ENST00000398153 VASNQ6EMK4 673 aa13.01□□□□□ -0.33
HDDC2-202ENST00000398153 ZNF808Q8N4W9 903 aaPredicted RBP13.01□□□□□ -0.33
HDDC2-202ENST00000398153 ZNF527Q8NB42 609 aa13.01□□□□□ -0.33
HDDC2-202ENST00000398153 CHDHQ8NE62 594 aaPredicted RBP13.01□□□□□ -0.33
HDDC2-202ENST00000398153 FAM83FQ8NEG4 500 aaPredicted RBP13.01□□□□□ -0.33
HDDC2-202ENST00000398153 CDS1Q92903 461 aa13.01□□□□□ -0.33
HDDC2-202ENST00000398153 NEURL3Q96EH8 262 aa13.01□□□□□ -0.33
HDDC2-202ENST00000398153 CHMP6Q96FZ7 201 aa13.01□□□□□ -0.33
HDDC2-202ENST00000398153 CCDC120Q96HB5 630 aa13.01□□□□□ -0.33
HDDC2-202ENST00000398153 PHF12Q96QT6 1004 aa13.01□□□□□ -0.33
HDDC2-202ENST00000398153 DMRTA2Q96SC8 542 aa13.01□□□□□ -0.33
HDDC2-202ENST00000398153 YIPF4Q9BSR8 244 aa13.01□□□□□ -0.33
HDDC2-202ENST00000398153 OR2B2Q9GZK3 357 aa13.01□□□□□ -0.33
HDDC2-202ENST00000398153 RABEP2Q9H5N1 569 aa13.01□□□□□ -0.33
HDDC2-202ENST00000398153 MRGBPQ9NV56 204 aa13.01□□□□□ -0.33
HDDC2-202ENST00000398153 LIPGQ9Y5X9 500 aa13.01□□□□□ -0.33
HDDC2-202ENST00000398153 NCKAP5O14513 1909 aa13.01□□□□□ -0.33
HDDC2-202ENST00000398153 DNAJC13O75165 2243 aa13.01□□□□□ -0.33
HDDC2-202ENST00000398153 DOPEY1Q5JWR5 2465 aa13.01□□□□□ -0.33
HDDC2-202ENST00000398153 AHRRA9YTQ3 701 aa13□□□□□ -0.33
HDDC2-202ENST00000398153 FAM47E-STBD1D6RA91 191 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms