RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 ACTR1BP42025 376 aa17.16■□□□□ 0.34
CHRFAM7A-202ENST00000397827 TNFRSF4P43489 277 aa17.16■□□□□ 0.34
CHRFAM7A-202ENST00000397827 TSFMP43897 325 aaKnown RBP17.16■□□□□ 0.34
CHRFAM7A-202ENST00000397827 LBX1P52954 281 aa17.16■□□□□ 0.34
CHRFAM7A-202ENST00000397827 ACTR1AP61163 376 aa17.16■□□□□ 0.34
CHRFAM7A-202ENST00000397827 SIM1P81133 766 aaPredicted RBP17.16■□□□□ 0.34
CHRFAM7A-202ENST00000397827 SHHQ15465 462 aa17.16■□□□□ 0.34
CHRFAM7A-202ENST00000397827 CEBPEQ15744 281 aa17.16■□□□□ 0.34
CHRFAM7A-202ENST00000397827 FAM214AQ32MH5 1076 aa17.16■□□□□ 0.34
CHRFAM7A-202ENST00000397827 FBXO42Q6P3S6 717 aa17.16■□□□□ 0.34
CHRFAM7A-202ENST00000397827 ASPGQ86U10 573 aa17.16■□□□□ 0.34
CHRFAM7A-202ENST00000397827 LINC00471Q8N535 108 aa17.16■□□□□ 0.34
CHRFAM7A-202ENST00000397827 DIO2Q92813 273 aa17.16■□□□□ 0.34
CHRFAM7A-202ENST00000397827 TTYH2Q9BSA4 534 aa17.16■□□□□ 0.34
CHRFAM7A-202ENST00000397827 ACTRT3Q9BYD9 372 aa17.16■□□□□ 0.34
CHRFAM7A-202ENST00000397827 SEC14L4Q9UDX3 406 aa17.16■□□□□ 0.34
CHRFAM7A-202ENST00000397827 KLF15Q9UIH9 416 aa17.16■□□□□ 0.34
CHRFAM7A-202ENST00000397827 STUB1Q9UNE7 303 aa17.16■□□□□ 0.34
CHRFAM7A-202ENST00000397827 DIMT1Q9UNQ2 313 aaKnown RBP17.16■□□□□ 0.34
CHRFAM7A-202ENST00000397827 P2RX6O15547 441 aa17.15■□□□□ 0.34
CHRFAM7A-202ENST00000397827 KLF8O95600 359 aaPredicted RBP17.15■□□□□ 0.34
CHRFAM7A-202ENST00000397827 CCNYL3P0C7X3 344 aa17.15■□□□□ 0.34
CHRFAM7A-202ENST00000397827 MSL3P1P0C860 447 aa17.15■□□□□ 0.34
CHRFAM7A-202ENST00000397827 NAGAP17050 411 aa17.15■□□□□ 0.34
CHRFAM7A-202ENST00000397827 TNFSF8P32971 234 aa17.15■□□□□ 0.34
CHRFAM7A-202ENST00000397827 PTGS2P35354 604 aa17.15■□□□□ 0.34
CHRFAM7A-202ENST00000397827 SDE2Q6IQ49 451 aa17.15■□□□□ 0.34
CHRFAM7A-202ENST00000397827 SLC27A4Q6P1M0 643 aa17.15■□□□□ 0.34
CHRFAM7A-202ENST00000397827 RRM2BQ7LG56 351 aa17.15■□□□□ 0.34
CHRFAM7A-202ENST00000397827 PSD4Q8NDX1 1056 aa17.15■□□□□ 0.34
CHRFAM7A-202ENST00000397827 OR52P1PQ8NH57 321 aa17.15■□□□□ 0.34
CHRFAM7A-202ENST00000397827 GRPEL2Q8TAA5 225 aa17.15■□□□□ 0.34
CHRFAM7A-202ENST00000397827 CDS1Q92903 461 aa17.15■□□□□ 0.34
CHRFAM7A-202ENST00000397827 GAL3ST3Q96A11 431 aa17.15■□□□□ 0.34
CHRFAM7A-202ENST00000397827 FAM131CQ96AQ9 280 aa17.15■□□□□ 0.34
CHRFAM7A-202ENST00000397827 SDHCQ99643 169 aaPredicted RBP17.15■□□□□ 0.34
CHRFAM7A-202ENST00000397827 ARHGDIGQ99819 225 aa17.15■□□□□ 0.34
CHRFAM7A-202ENST00000397827 IL20RAQ9UHF4 553 aa17.15■□□□□ 0.34
CHRFAM7A-202ENST00000397827 YARS2Q9Y2Z4 477 aaKnown RBP17.15■□□□□ 0.34
CHRFAM7A-202ENST00000397827 A0A1W2PQ72 361 aa17.15■□□□□ 0.34
CHRFAM7A-202ENST00000397827 C12orf71A8MTZ7 269 aa17.15■□□□□ 0.34
CHRFAM7A-202ENST00000397827 PLD2O14939 933 aa17.15■□□□□ 0.34
CHRFAM7A-202ENST00000397827 GSTM3P21266 225 aa17.15■□□□□ 0.34
CHRFAM7A-202ENST00000397827 OR3A3P47888 321 aa17.15■□□□□ 0.34
CHRFAM7A-202ENST00000397827 ID2Q02363 134 aa17.15■□□□□ 0.34
CHRFAM7A-202ENST00000397827 MLLT11Q13015 90 aaPredicted RBP17.15■□□□□ 0.34
CHRFAM7A-202ENST00000397827 PXDC1Q5TGL8 231 aa17.15■□□□□ 0.34
CHRFAM7A-202ENST00000397827 IDO2Q6ZQW0 420 aa17.15■□□□□ 0.34
CHRFAM7A-202ENST00000397827 TMEFF1Q8IYR6 380 aa17.15■□□□□ 0.34
CHRFAM7A-202ENST00000397827 PMEPA1Q969W9 287 aa17.15■□□□□ 0.34
CHRFAM7A-202ENST00000397827 SMURF1Q9HCE7 757 aa17.15■□□□□ 0.34
CHRFAM7A-202ENST00000397827 ZNF860A6NHJ4 632 aa17.14■□□□□ 0.33
CHRFAM7A-202ENST00000397827 LOC110117498-PIK3R3F6TDL0 507 aa17.14■□□□□ 0.33
CHRFAM7A-202ENST00000397827 SYT5O00445 386 aa17.14■□□□□ 0.33
CHRFAM7A-202ENST00000397827 CTSVO60911 334 aa17.14■□□□□ 0.33
CHRFAM7A-202ENST00000397827 EGFP01133 1207 aa17.14■□□□□ 0.33
CHRFAM7A-202ENST00000397827 ACADMP11310 421 aa17.14■□□□□ 0.33
CHRFAM7A-202ENST00000397827 CPN2P22792 545 aa17.14■□□□□ 0.33
CHRFAM7A-202ENST00000397827 ARFIP1P53367 373 aa17.14■□□□□ 0.33
CHRFAM7A-202ENST00000397827 RGS8P57771 180 aaPredicted RBP17.14■□□□□ 0.33
CHRFAM7A-202ENST00000397827 RPS15AP62244 130 aaKnown RBP17.14■□□□□ 0.33
CHRFAM7A-202ENST00000397827 TFF2Q03403 129 aa17.14■□□□□ 0.33
CHRFAM7A-202ENST00000397827 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.14■□□□□ 0.33
CHRFAM7A-202ENST00000397827 RGS1Q08116 209 aa17.14■□□□□ 0.33
CHRFAM7A-202ENST00000397827 TRAM2Q15035 370 aa17.14■□□□□ 0.33
CHRFAM7A-202ENST00000397827 TRIM69Q86WT6 500 aa17.14■□□□□ 0.33
CHRFAM7A-202ENST00000397827 IL17RDQ8NFM7 739 aa17.14■□□□□ 0.33
CHRFAM7A-202ENST00000397827 OR10G6Q8NH81 332 aa17.14■□□□□ 0.33
CHRFAM7A-202ENST00000397827 RNFT2Q96EX2 444 aa17.14■□□□□ 0.33
CHRFAM7A-202ENST00000397827 GABRG3Q99928 467 aa17.14■□□□□ 0.33
CHRFAM7A-202ENST00000397827 SLC30A2Q9BRI3 323 aa17.14■□□□□ 0.33
CHRFAM7A-202ENST00000397827 NARFLQ9H6Q4 476 aa17.14■□□□□ 0.33
CHRFAM7A-202ENST00000397827 LYARQ9NX58 379 aaKnown RBP17.14■□□□□ 0.33
CHRFAM7A-202ENST00000397827 LIPT1Q9Y234 373 aa17.14■□□□□ 0.33
CHRFAM7A-202ENST00000397827 SPIN1Q9Y657 262 aaPredicted RBP17.14■□□□□ 0.33
CHRFAM7A-202ENST00000397827 TICRRQ7Z2Z1 1910 aa17.14■□□□□ 0.33
CHRFAM7A-202ENST00000397827 RASGRP1O95267 797 aa17.14■□□□□ 0.33
CHRFAM7A-202ENST00000397827 THY1P04216 161 aa17.14■□□□□ 0.33
CHRFAM7A-202ENST00000397827 HTR2BP41595 481 aa17.14■□□□□ 0.33
CHRFAM7A-202ENST00000397827 GPR4P46093 362 aa17.14■□□□□ 0.33
CHRFAM7A-202ENST00000397827 GAS1P54826 345 aa17.14■□□□□ 0.33
CHRFAM7A-202ENST00000397827 ST3GAL3Q11203 375 aa17.14■□□□□ 0.33
CHRFAM7A-202ENST00000397827 SLC25A30Q5SVS4 291 aa17.14■□□□□ 0.33
CHRFAM7A-202ENST00000397827 PRAMEF8Q5VWM4 474 aa17.14■□□□□ 0.33
CHRFAM7A-202ENST00000397827 PRAMEF7Q5VXH5 474 aa17.14■□□□□ 0.33
CHRFAM7A-202ENST00000397827 SLC30A6Q6NXT4 461 aa17.14■□□□□ 0.33
CHRFAM7A-202ENST00000397827 FAM109AQ8N4B1 249 aa17.14■□□□□ 0.33
CHRFAM7A-202ENST00000397827 OR9Q1Q8NGQ5 310 aa17.14■□□□□ 0.33
CHRFAM7A-202ENST00000397827 TMEM163Q8TC26 289 aa17.14■□□□□ 0.33
CHRFAM7A-202ENST00000397827 GNPDA2Q8TDQ7 276 aa17.14■□□□□ 0.33
CHRFAM7A-202ENST00000397827 CHAC2Q8WUX2 184 aa17.14■□□□□ 0.33
CHRFAM7A-202ENST00000397827 GATAD2BQ8WXI9 593 aa17.14■□□□□ 0.33
CHRFAM7A-202ENST00000397827 SIPA1Q96FS4 1042 aa17.14■□□□□ 0.33
CHRFAM7A-202ENST00000397827 ATP13A2Q9NQ11 1180 aa17.14■□□□□ 0.33
CHRFAM7A-202ENST00000397827 TOR4AQ9NXH8 423 aa17.14■□□□□ 0.33
CHRFAM7A-202ENST00000397827 CENPVL1A0A0U1RR11 272 aa17.13■□□□□ 0.33
CHRFAM7A-202ENST00000397827 HYKKA2RU49 373 aa17.13■□□□□ 0.33
CHRFAM7A-202ENST00000397827 SSX4O60224 188 aa17.13■□□□□ 0.33
CHRFAM7A-202ENST00000397827 UBXN7O94888 489 aa17.13■□□□□ 0.33
CHRFAM7A-202ENST00000397827 SLC35G6P0C7Q6 338 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms