RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 PINK1Q9BXM7 581 aa25.4■■□□□ 1.66
CPNE1-203ENST00000397442 TRBV11-1A0A0K0K1C0 115 aa25.39■■□□□ 1.66
CPNE1-203ENST00000397442 CDC14CA4D256 554 aa25.39■■□□□ 1.66
CPNE1-203ENST00000397442 TMEM200CA6NKL6 621 aa25.39■■□□□ 1.66
CPNE1-203ENST00000397442 UGT2B17O75795 530 aa25.39■■□□□ 1.66
CPNE1-203ENST00000397442 ZNF311Q5JNZ3 666 aa25.39■■□□□ 1.66
CPNE1-203ENST00000397442 OR8K3Q8NH51 312 aa25.39■■□□□ 1.66
CPNE1-203ENST00000397442 ELP5Q8TE02 316 aa25.39■■□□□ 1.66
CPNE1-203ENST00000397442 ZNF354BQ96LW1 612 aa25.39■■□□□ 1.66
CPNE1-203ENST00000397442 G6PC3Q9BUM1 346 aa25.39■■□□□ 1.66
CPNE1-203ENST00000397442 LIN28AQ9H9Z2 209 aaKnown RBP25.39■■□□□ 1.66
CPNE1-203ENST00000397442 NTN4Q9HB63 628 aa25.39■■□□□ 1.66
CPNE1-203ENST00000397442 PCSK5Q92824 1860 aa25.39■■□□□ 1.65
CPNE1-203ENST00000397442 NPIPB9F8W1W9 429 aa25.39■■□□□ 1.65
CPNE1-203ENST00000397442 CLOCKO15516 846 aa25.39■■□□□ 1.65
CPNE1-203ENST00000397442 PRSS23O95084 383 aa25.39■■□□□ 1.65
CPNE1-203ENST00000397442 CAPNS1P04632 268 aa25.39■■□□□ 1.65
CPNE1-203ENST00000397442 PRKAR1BP31321 381 aa25.39■■□□□ 1.65
CPNE1-203ENST00000397442 NR0B1P51843 470 aaKnown RBP25.39■■□□□ 1.65
CPNE1-203ENST00000397442 FLYWCH1Q4VC44 716 aa25.39■■□□□ 1.65
CPNE1-203ENST00000397442 LPCAT4Q643R3 524 aa25.39■■□□□ 1.65
CPNE1-203ENST00000397442 DHRS4L2Q6PKH6 230 aa25.39■■□□□ 1.65
CPNE1-203ENST00000397442 PEX5LQ8IYB4 626 aa25.39■■□□□ 1.65
CPNE1-203ENST00000397442 NUBPLQ8TB37 319 aa25.39■■□□□ 1.65
CPNE1-203ENST00000397442 PROX1Q92786 737 aa25.39■■□□□ 1.65
CPNE1-203ENST00000397442 CENPNQ96H22 339 aaPredicted RBP25.39■■□□□ 1.65
CPNE1-203ENST00000397442 NDUFAF4Q9P032 175 aa25.39■■□□□ 1.65
CPNE1-203ENST00000397442 PCDHGA6Q9Y5G7 932 aa25.39■■□□□ 1.65
CPNE1-203ENST00000397442 LGI1O95970 557 aa25.38■■□□□ 1.65
CPNE1-203ENST00000397442 LDLRP01130 860 aa25.38■■□□□ 1.65
CPNE1-203ENST00000397442 PEX2P28328 305 aa25.38■■□□□ 1.65
CPNE1-203ENST00000397442 OTX2P32243 289 aa25.38■■□□□ 1.65
CPNE1-203ENST00000397442 TRIP10Q15642 601 aa25.38■■□□□ 1.65
CPNE1-203ENST00000397442 DECR1Q16698 335 aa25.38■■□□□ 1.65
CPNE1-203ENST00000397442 NDUFAF7Q7L592 441 aa25.38■■□□□ 1.65
CPNE1-203ENST00000397442 OR4D11Q8NGI4 311 aa25.38■■□□□ 1.65
CPNE1-203ENST00000397442 TMBIM1Q969X1 311 aa25.38■■□□□ 1.65
CPNE1-203ENST00000397442 TP53INP1Q96A56 240 aa25.38■■□□□ 1.65
CPNE1-203ENST00000397442 THSD1Q9NS62 852 aa25.38■■□□□ 1.65
CPNE1-203ENST00000397442 ZNF443Q9Y2A4 671 aaPredicted RBP25.38■■□□□ 1.65
CPNE1-203ENST00000397442 IFT52Q9Y366 437 aa25.38■■□□□ 1.65
CPNE1-203ENST00000397442 PCDHGA10Q9Y5H3 936 aa25.38■■□□□ 1.65
CPNE1-203ENST00000397442 MRPS18BQ9Y676 258 aaKnown RBP25.38■■□□□ 1.65
CPNE1-203ENST00000397442 ACOX3O15254 700 aa25.37■■□□□ 1.65
CPNE1-203ENST00000397442 IL33O95760 270 aa25.37■■□□□ 1.65
CPNE1-203ENST00000397442 CST1P01037 141 aa25.37■■□□□ 1.65
CPNE1-203ENST00000397442 THBS1P07996 1170 aa25.37■■□□□ 1.65
CPNE1-203ENST00000397442 ATP6V1C1P21283 382 aa25.37■■□□□ 1.65
CPNE1-203ENST00000397442 IL10RAQ13651 578 aa25.37■■□□□ 1.65
CPNE1-203ENST00000397442 BTBD16Q32M84 506 aa25.37■■□□□ 1.65
CPNE1-203ENST00000397442 PLAG1Q6DJT9 500 aa25.37■■□□□ 1.65
CPNE1-203ENST00000397442 NACC2Q96BF6 587 aa25.37■■□□□ 1.65
CPNE1-203ENST00000397442 EFHD2Q96C19 240 aaPredicted RBP25.37■■□□□ 1.65
CPNE1-203ENST00000397442 HSPBAP1Q96EW2 488 aa25.37■■□□□ 1.65
CPNE1-203ENST00000397442 AMBRA1Q9C0C7 1298 aa25.37■■□□□ 1.65
CPNE1-203ENST00000397442 DNAJB9Q9UBS3 223 aa25.37■■□□□ 1.65
CPNE1-203ENST00000397442 CLDN24A6NM45 220 aa25.36■■□□□ 1.65
CPNE1-203ENST00000397442 SYT5O00445 386 aa25.36■■□□□ 1.65
CPNE1-203ENST00000397442 DEAF1O75398 565 aaPredicted RBP25.36■■□□□ 1.65
CPNE1-203ENST00000397442 DIRAS1O95057 198 aa25.36■■□□□ 1.65
CPNE1-203ENST00000397442 DBIP07108 87 aaKnown RBP25.36■■□□□ 1.65
CPNE1-203ENST00000397442 EEF1A1P68104 462 aaKnown RBP25.36■■□□□ 1.65
CPNE1-203ENST00000397442 KCNC4Q03721 635 aa25.36■■□□□ 1.65
CPNE1-203ENST00000397442 RTP5Q14D33 572 aa25.36■■□□□ 1.65
CPNE1-203ENST00000397442 OGFRL1Q5TC84 451 aaPredicted RBP25.36■■□□□ 1.65
CPNE1-203ENST00000397442 ZNF836Q6ZNA1 936 aa25.36■■□□□ 1.65
CPNE1-203ENST00000397442 C16orf47Q6ZP98 133 aaPredicted RBP25.36■■□□□ 1.65
CPNE1-203ENST00000397442 PACS2Q86VP3 889 aa25.36■■□□□ 1.65
CPNE1-203ENST00000397442 LACC1Q8IV20 430 aa25.36■■□□□ 1.65
CPNE1-203ENST00000397442 PRR22Q8IZ63 422 aa25.36■■□□□ 1.65
CPNE1-203ENST00000397442 CLIP4Q8N3C7 705 aa25.36■■□□□ 1.65
CPNE1-203ENST00000397442 IL17BQ9UHF5 180 aa25.36■■□□□ 1.65
CPNE1-203ENST00000397442 CELA2AP08217 269 aa25.36■■□□□ 1.65
CPNE1-203ENST00000397442 IL7RP16871 459 aa25.36■■□□□ 1.65
CPNE1-203ENST00000397442 EXT1Q16394 746 aa25.36■■□□□ 1.65
CPNE1-203ENST00000397442 CARM1Q86X55 608 aa25.36■■□□□ 1.65
CPNE1-203ENST00000397442 DIO2Q92813 273 aa25.36■■□□□ 1.65
CPNE1-203ENST00000397442 RLIMQ9NVW2 624 aa25.36■■□□□ 1.65
CPNE1-203ENST00000397442 NSG1A0A0A6YYJ2 146 aa25.35■■□□□ 1.65
CPNE1-203ENST00000397442 SEMA7AO75326 666 aa25.35■■□□□ 1.65
CPNE1-203ENST00000397442 NID1P14543 1247 aa25.35■■□□□ 1.65
CPNE1-203ENST00000397442 ABCD3P28288 659 aa25.35■■□□□ 1.65
CPNE1-203ENST00000397442 LARS2Q15031 903 aaKnown RBP25.35■■□□□ 1.65
CPNE1-203ENST00000397442 TGIF1Q15583 401 aa25.35■■□□□ 1.65
CPNE1-203ENST00000397442 ZNF141Q15928 474 aa25.35■■□□□ 1.65
CPNE1-203ENST00000397442 NRF1Q16656 503 aa25.35■■□□□ 1.65
CPNE1-203ENST00000397442 LRRC36Q1X8D7 754 aa25.35■■□□□ 1.65
CPNE1-203ENST00000397442 RBM45Q8IUH3 476 aaKnown RBP25.35■■□□□ 1.65
CPNE1-203ENST00000397442 SLC34A3Q8N130 599 aa25.35■■□□□ 1.65
CPNE1-203ENST00000397442 IL22RA1Q8N6P7 574 aa25.35■■□□□ 1.65
CPNE1-203ENST00000397442 OR4C3Q8NH37 302 aa25.35■■□□□ 1.65
CPNE1-203ENST00000397442 M1APQ8TC57 530 aa25.35■■□□□ 1.65
CPNE1-203ENST00000397442 THAP3Q8WTV1 239 aaPredicted RBP25.35■■□□□ 1.65
CPNE1-203ENST00000397442 ZNF300Q96RE9 604 aaPredicted RBP25.35■■□□□ 1.65
CPNE1-203ENST00000397442 MMP25Q9NPA2 562 aa25.35■■□□□ 1.65
CPNE1-203ENST00000397442 KCND3Q9UK17 655 aa25.35■■□□□ 1.65
CPNE1-203ENST00000397442 ZNF232Q9UNY5 417 aa25.35■■□□□ 1.65
CPNE1-203ENST00000397442 M0R3H8 397 aa25.34■■□□□ 1.65
CPNE1-203ENST00000397442 TSPAN2O60636 221 aa25.34■■□□□ 1.65
CPNE1-203ENST00000397442 ZNF354AO60765 605 aaPredicted RBP25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms