RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 ARMC4Q5T2S8 1044 aa22.21■■□□□ 1.15
PABPN1-202ENST00000397276 TRIM48Q8IWZ4 208 aa22.21■■□□□ 1.15
PABPN1-202ENST00000397276 TMEM203Q969S6 136 aa22.21■■□□□ 1.15
PABPN1-202ENST00000397276 ZNF582Q96NG8 517 aaPredicted RBP22.21■■□□□ 1.15
PABPN1-202ENST00000397276 SAP130Q9H0E3 1048 aa22.21■■□□□ 1.15
PABPN1-202ENST00000397276 MRPS2Q9Y399 296 aaKnown RBP22.21■■□□□ 1.15
PABPN1-202ENST00000397276 MYL12BO14950 172 aa22.21■■□□□ 1.15
PABPN1-202ENST00000397276 LDB3O75112 727 aa22.21■■□□□ 1.15
PABPN1-202ENST00000397276 CHRNB1P11230 501 aa22.21■■□□□ 1.15
PABPN1-202ENST00000397276 RGS8P57771 180 aaPredicted RBP22.21■■□□□ 1.15
PABPN1-202ENST00000397276 RHAGQ02094 409 aa22.21■■□□□ 1.15
PABPN1-202ENST00000397276 ZNF79Q15937 498 aa22.21■■□□□ 1.15
PABPN1-202ENST00000397276 TIMM50Q3ZCQ8 353 aa22.21■■□□□ 1.15
PABPN1-202ENST00000397276 TRMT12Q53H54 448 aaKnown RBP22.21■■□□□ 1.15
PABPN1-202ENST00000397276 MEDAGQ5VYS4 303 aa22.21■■□□□ 1.15
PABPN1-202ENST00000397276 ZNF761Q86XN6 746 aaPredicted RBP22.21■■□□□ 1.15
PABPN1-202ENST00000397276 OR8D4Q8NGM9 314 aa22.21■■□□□ 1.15
PABPN1-202ENST00000397276 ASB15Q8WXK1 588 aa22.21■■□□□ 1.15
PABPN1-202ENST00000397276 POLDIP3Q9BY77 421 aaKnown RBP22.21■■□□□ 1.15
PABPN1-202ENST00000397276 PRRG3Q9BZD7 231 aa22.21■■□□□ 1.15
PABPN1-202ENST00000397276 SMURF1Q9HCE7 757 aa22.21■■□□□ 1.15
PABPN1-202ENST00000397276 MSRAQ9UJ68 235 aa22.21■■□□□ 1.15
PABPN1-202ENST00000397276 MEIOCA2RUB1 952 aa22.2■■□□□ 1.14
PABPN1-202ENST00000397276 CDK5Q00535 292 aa22.2■■□□□ 1.14
PABPN1-202ENST00000397276 TNFRSF17Q02223 184 aa22.2■■□□□ 1.14
PABPN1-202ENST00000397276 OCLNQ16625 522 aa22.2■■□□□ 1.14
PABPN1-202ENST00000397276 ENTPD8Q5MY95 495 aa22.2■■□□□ 1.14
PABPN1-202ENST00000397276 LYPD8Q6UX82 237 aa22.2■■□□□ 1.14
PABPN1-202ENST00000397276 USP30Q70CQ3 517 aa22.2■■□□□ 1.14
PABPN1-202ENST00000397276 NANOGP1Q8N7R0 232 aa22.2■■□□□ 1.14
PABPN1-202ENST00000397276 OR4K14Q8NGD5 310 aa22.2■■□□□ 1.14
PABPN1-202ENST00000397276 OR52I1Q8NGK6 324 aa22.2■■□□□ 1.14
PABPN1-202ENST00000397276 RPLP0P6Q8NHW5 317 aa22.2■■□□□ 1.14
PABPN1-202ENST00000397276 FLVCR1-AS1Q8TAF5 88 aa22.2■■□□□ 1.14
PABPN1-202ENST00000397276 MND1Q9BWT6 205 aa22.2■■□□□ 1.14
PABPN1-202ENST00000397276 KCMF1Q9P0J7 381 aa22.2■■□□□ 1.14
PABPN1-202ENST00000397276 NUFIP1Q9UHK0 495 aaKnown RBP22.2■■□□□ 1.14
PABPN1-202ENST00000397276 PIAS3Q9Y6X2 628 aa22.2■■□□□ 1.14
PABPN1-202ENST00000397276 CENPVL1A0A0U1RR11 272 aa22.2■■□□□ 1.14
PABPN1-202ENST00000397276 LRRTM2O43300 516 aa22.2■■□□□ 1.14
PABPN1-202ENST00000397276 ETV5P41161 510 aa22.2■■□□□ 1.14
PABPN1-202ENST00000397276 ETV1P50549 477 aa22.2■■□□□ 1.14
PABPN1-202ENST00000397276 TPMTP51580 245 aa22.2■■□□□ 1.14
PABPN1-202ENST00000397276 SMSP52788 366 aa22.2■■□□□ 1.14
PABPN1-202ENST00000397276 SRP54P61011 504 aaKnown RBP22.2■■□□□ 1.14
PABPN1-202ENST00000397276 CEBPEQ15744 281 aa22.2■■□□□ 1.14
PABPN1-202ENST00000397276 FIGLAQ6QHK4 219 aa22.2■■□□□ 1.14
PABPN1-202ENST00000397276 C19orf48Q6RUI8 117 aa22.2■■□□□ 1.14
PABPN1-202ENST00000397276 FAM26EQ8N5C1 309 aa22.2■■□□□ 1.14
PABPN1-202ENST00000397276 OR7G1Q8NGA0 311 aa22.2■■□□□ 1.14
PABPN1-202ENST00000397276 TEX47Q8TBZ9 253 aa22.2■■□□□ 1.14
PABPN1-202ENST00000397276 SLC22A18Q96BI1 424 aa22.2■■□□□ 1.14
PABPN1-202ENST00000397276 ASPNQ9BXN1 380 aa22.2■■□□□ 1.14
PABPN1-202ENST00000397276 SNTG1Q9NSN8 517 aa22.2■■□□□ 1.14
PABPN1-202ENST00000397276 V9GYH0 126 aa22.2■■□□□ 1.14
PABPN1-202ENST00000397276 TNFRSF10AO00220 468 aa22.19■■□□□ 1.14
PABPN1-202ENST00000397276 HNRNPA2B1P22626 353 aaKnown RBP22.19■■□□□ 1.14
PABPN1-202ENST00000397276 GPR4P46093 362 aa22.19■■□□□ 1.14
PABPN1-202ENST00000397276 GALK2Q01415 458 aa22.19■■□□□ 1.14
PABPN1-202ENST00000397276 SUZ12Q15022 739 aaKnown RBP22.19■■□□□ 1.14
PABPN1-202ENST00000397276 GPR68Q15743 365 aa22.19■■□□□ 1.14
PABPN1-202ENST00000397276 FCRL6Q6DN72 434 aa22.19■■□□□ 1.14
PABPN1-202ENST00000397276 MFSD12Q6NUT3 480 aa22.19■■□□□ 1.14
PABPN1-202ENST00000397276 RAB43Q86YS6 212 aa22.19■■□□□ 1.14
PABPN1-202ENST00000397276 ARSGQ96EG1 525 aa22.19■■□□□ 1.14
PABPN1-202ENST00000397276 MCOLN1Q9GZU1 580 aa22.19■■□□□ 1.14
PABPN1-202ENST00000397276 ADAP2Q9NPF8 381 aa22.19■■□□□ 1.14
PABPN1-202ENST00000397276 LIPT1Q9Y234 373 aa22.19■■□□□ 1.14
PABPN1-202ENST00000397276 CFL2Q9Y281 166 aa22.19■■□□□ 1.14
PABPN1-202ENST00000397276 CENPBD1B2RD01 187 aa22.19■■□□□ 1.14
PABPN1-202ENST00000397276 MXD1Q05195 221 aa22.19■■□□□ 1.14
PABPN1-202ENST00000397276 NDUFA9Q16795 377 aa22.19■■□□□ 1.14
PABPN1-202ENST00000397276 ALG11Q2TAA5 492 aa22.19■■□□□ 1.14
PABPN1-202ENST00000397276 CD300LDQ6UXZ3 194 aa22.19■■□□□ 1.14
PABPN1-202ENST00000397276 PLEKHM3Q6ZWE6 761 aa22.19■■□□□ 1.14
PABPN1-202ENST00000397276 DIO2Q92813 273 aa22.19■■□□□ 1.14
PABPN1-202ENST00000397276 TCEAL2Q9H3H9 227 aaPredicted RBP22.19■■□□□ 1.14
PABPN1-202ENST00000397276 CLDND1Q9NY35 253 aa22.19■■□□□ 1.14
PABPN1-202ENST00000397276 ACTR10Q9NZ32 417 aa22.19■■□□□ 1.14
PABPN1-202ENST00000397276 A0A1W2PQ09 198 aa22.18■■□□□ 1.14
PABPN1-202ENST00000397276 PSMA1P25786 263 aaKnown RBP22.18■■□□□ 1.14
PABPN1-202ENST00000397276 HOXD11P31277 338 aaPredicted RBP22.18■■□□□ 1.14
PABPN1-202ENST00000397276 TRAM2Q15035 370 aa22.18■■□□□ 1.14
PABPN1-202ENST00000397276 SMUG1Q53HV7 270 aa22.18■■□□□ 1.14
PABPN1-202ENST00000397276 OR2G6Q5TZ20 316 aa22.18■■□□□ 1.14
PABPN1-202ENST00000397276 OR5T3Q8NGG3 340 aa22.18■■□□□ 1.14
PABPN1-202ENST00000397276 MCHR1Q99705 422 aa22.18■■□□□ 1.14
PABPN1-202ENST00000397276 ARHGDIGQ99819 225 aa22.18■■□□□ 1.14
PABPN1-202ENST00000397276 STARD5Q9NSY2 213 aa22.18■■□□□ 1.14
PABPN1-202ENST00000397276 KLHL28Q9NXS3 571 aa22.18■■□□□ 1.14
PABPN1-202ENST00000397276 NPAP1Q9NZP6 1156 aa22.18■■□□□ 1.14
PABPN1-202ENST00000397276 GON4LQ3T8J9 2241 aa22.18■■□□□ 1.14
PABPN1-202ENST00000397276 ARHGEF17Q96PE2 2063 aaPredicted RBP22.18■■□□□ 1.14
PABPN1-202ENST00000397276 LRRC72A6NJI9 287 aa22.18■■□□□ 1.14
PABPN1-202ENST00000397276 CSF2P04141 144 aa22.18■■□□□ 1.14
PABPN1-202ENST00000397276 ARFIP1P53367 373 aa22.18■■□□□ 1.14
PABPN1-202ENST00000397276 ST3GAL3Q11203 375 aa22.18■■□□□ 1.14
PABPN1-202ENST00000397276 DUSP5Q16690 384 aa22.18■■□□□ 1.14
PABPN1-202ENST00000397276 SLC30A6Q6NXT4 461 aa22.18■■□□□ 1.14
PABPN1-202ENST00000397276 SLC27A4Q6P1M0 643 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms