RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 TAS2R9Q9NYW1 312 aa7.89□□□□□ -1.15
CAPN3-208ENST00000397204 TRPS1Q9UHF7 1281 aa7.89□□□□□ -1.15
CAPN3-208ENST00000397204 DKKL1Q9UK85 242 aa7.89□□□□□ -1.15
CAPN3-208ENST00000397204 UTS2RQ9UKP6 389 aa7.89□□□□□ -1.15
CAPN3-208ENST00000397204 ZNF337Q9Y3M9 751 aa7.89□□□□□ -1.15
CAPN3-208ENST00000397204 ANK3Q12955 4377 aaKnown RBP7.89□□□□□ -1.15
CAPN3-208ENST00000397204 INAFM1C9JVW0 142 aa7.88□□□□□ -1.15
CAPN3-208ENST00000397204 FADS1O60427 444 aa7.88□□□□□ -1.15
CAPN3-208ENST00000397204 PLOD3O60568 738 aa7.88□□□□□ -1.15
CAPN3-208ENST00000397204 PDYNP01213 254 aa7.88□□□□□ -1.15
CAPN3-208ENST00000397204 RPLP1P05386 114 aaKnown RBP7.88□□□□□ -1.15
CAPN3-208ENST00000397204 HSD3B1P14060 373 aa7.88□□□□□ -1.15
CAPN3-208ENST00000397204 HSD3B2P26439 372 aa7.88□□□□□ -1.15
CAPN3-208ENST00000397204 LOXP28300 417 aaPredicted RBP7.88□□□□□ -1.15
CAPN3-208ENST00000397204 IL12BP29460 328 aa7.88□□□□□ -1.15
CAPN3-208ENST00000397204 MPIP34949 423 aa7.88□□□□□ -1.15
CAPN3-208ENST00000397204 ALDH9A1P49189 494 aa7.88□□□□□ -1.15
CAPN3-208ENST00000397204 SERPINB8P50452 374 aa7.88□□□□□ -1.15
CAPN3-208ENST00000397204 SUCLG1P53597 346 aaKnown RBP7.88□□□□□ -1.15
CAPN3-208ENST00000397204 CLDN15P56746 228 aa7.88□□□□□ -1.15
CAPN3-208ENST00000397204 RPS3AP61247 264 aaKnown RBP7.88□□□□□ -1.15
CAPN3-208ENST00000397204 MRPS35P82673 323 aaKnown RBP7.88□□□□□ -1.15
CAPN3-208ENST00000397204 GANABQ14697 944 aaKnown RBP7.88□□□□□ -1.15
CAPN3-208ENST00000397204 LTB4RQ15722 352 aa7.88□□□□□ -1.15
CAPN3-208ENST00000397204 ERCC6LQ2NKX8 1250 aa7.88□□□□□ -1.15
CAPN3-208ENST00000397204 CYP27C1Q4G0S4 372 aa7.88□□□□□ -1.15
CAPN3-208ENST00000397204 ZNF628Q5EBL2 1059 aa7.88□□□□□ -1.15
CAPN3-208ENST00000397204 FAM214BQ7L5A3 538 aa7.88□□□□□ -1.15
CAPN3-208ENST00000397204 CXXC5Q7LFL8 322 aaKnown RBP7.88□□□□□ -1.15
CAPN3-208ENST00000397204 SLC44A2Q8IWA5 706 aaPredicted RBP7.88□□□□□ -1.15
CAPN3-208ENST00000397204 UBQLNLQ8IYU4 475 aa7.88□□□□□ -1.15
CAPN3-208ENST00000397204 PLD6Q8N2A8 252 aaKnown RBP7.88□□□□□ -1.15
CAPN3-208ENST00000397204 C1orf52Q8N6N3 182 aaKnown RBP7.88□□□□□ -1.15
CAPN3-208ENST00000397204 FADS6Q8N9I5 356 aa7.88□□□□□ -1.15
CAPN3-208ENST00000397204 ZNF610Q8N9Z0 462 aa7.88□□□□□ -1.15
CAPN3-208ENST00000397204 IGFBPL1Q8WX77 278 aa7.88□□□□□ -1.15
CAPN3-208ENST00000397204 MRRFQ96E11 262 aaKnown RBP7.88□□□□□ -1.15
CAPN3-208ENST00000397204 SHCBP1LQ9BZQ2 653 aa7.88□□□□□ -1.15
CAPN3-208ENST00000397204 RAB17Q9H0T7 212 aa7.88□□□□□ -1.15
CAPN3-208ENST00000397204 STMN4Q9H169 189 aaPredicted RBP7.88□□□□□ -1.15
CAPN3-208ENST00000397204 VPS11Q9H270 941 aa7.88□□□□□ -1.15
CAPN3-208ENST00000397204 KCNF1Q9H3M0 494 aa7.88□□□□□ -1.15
CAPN3-208ENST00000397204 DSN1Q9H410 356 aa7.88□□□□□ -1.15
CAPN3-208ENST00000397204 PTGES2Q9H7Z7 377 aa7.88□□□□□ -1.15
CAPN3-208ENST00000397204 RNF122Q9H9V4 155 aa7.88□□□□□ -1.15
CAPN3-208ENST00000397204 FANCFQ9NPI8 374 aa7.88□□□□□ -1.15
CAPN3-208ENST00000397204 PFDN4Q9NQP4 134 aa7.88□□□□□ -1.15
CAPN3-208ENST00000397204 PLSCR4Q9NRQ2 329 aa7.88□□□□□ -1.15
CAPN3-208ENST00000397204 FARSBQ9NSD9 589 aaKnown RBP7.88□□□□□ -1.15
CAPN3-208ENST00000397204 ZNF701Q9NV72 531 aaPredicted RBP7.88□□□□□ -1.15
CAPN3-208ENST00000397204 STOML1Q9UBI4 398 aa7.88□□□□□ -1.15
CAPN3-208ENST00000397204 HEY2Q9UBP5 337 aa7.88□□□□□ -1.15
CAPN3-208ENST00000397204 MCM8Q9UJA3 840 aa7.88□□□□□ -1.15
CAPN3-208ENST00000397204 NFU1Q9UMS0 254 aa7.88□□□□□ -1.15
CAPN3-208ENST00000397204 DSCAMO60469 2012 aa7.88□□□□□ -1.15
CAPN3-208ENST00000397204 OR2M5A3KFT3 312 aa7.87□□□□□ -1.15
CAPN3-208ENST00000397204 PPP6CO00743 305 aa7.87□□□□□ -1.15
CAPN3-208ENST00000397204 KLF4O43474 513 aa7.87□□□□□ -1.15
CAPN3-208ENST00000397204 CRLF1O75462 422 aa7.87□□□□□ -1.15
CAPN3-208ENST00000397204 ESRRBO95718 433 aa7.87□□□□□ -1.15
CAPN3-208ENST00000397204 HK1P19367 917 aa7.87□□□□□ -1.15
CAPN3-208ENST00000397204 IL11P20809 199 aa7.87□□□□□ -1.15
CAPN3-208ENST00000397204 PHBP35232 272 aa7.87□□□□□ -1.15
CAPN3-208ENST00000397204 SERPINB4P48594 390 aa7.87□□□□□ -1.15
CAPN3-208ENST00000397204 PTH2RP49190 550 aa7.87□□□□□ -1.15
CAPN3-208ENST00000397204 CLK3P49761 638 aaKnown RBP7.87□□□□□ -1.15
CAPN3-208ENST00000397204 CORO7P57737 925 aa7.87□□□□□ -1.15
CAPN3-208ENST00000397204 SIRPAP78324 504 aa7.87□□□□□ -1.15
CAPN3-208ENST00000397204 HEPACAMQ14CZ8 416 aa7.87□□□□□ -1.15
CAPN3-208ENST00000397204 GUSBP1Q15486 140 aa7.87□□□□□ -1.15
CAPN3-208ENST00000397204 UAP1Q16222 522 aaPredicted RBP7.87□□□□□ -1.15
CAPN3-208ENST00000397204 TSNAXIP1Q2TAA8 658 aa7.87□□□□□ -1.15
CAPN3-208ENST00000397204 BEX5Q5H9J7 111 aa7.87□□□□□ -1.15
CAPN3-208ENST00000397204 RAET1LQ5VY80 246 aa7.87□□□□□ -1.15
CAPN3-208ENST00000397204 ANKRD34AQ69YU3 496 aa7.87□□□□□ -1.15
CAPN3-208ENST00000397204 FAM180BQ6P0A1 224 aa7.87□□□□□ -1.15
CAPN3-208ENST00000397204 ZDHHC24Q6UX98 284 aa7.87□□□□□ -1.15
CAPN3-208ENST00000397204 C22orf34Q6ZV56 151 aa7.87□□□□□ -1.15
CAPN3-208ENST00000397204 ZNF550Q7Z398 422 aa7.87□□□□□ -1.15
CAPN3-208ENST00000397204 ZNF611Q8N823 705 aa7.87□□□□□ -1.15
CAPN3-208ENST00000397204 OR2M3Q8NG83 312 aa7.87□□□□□ -1.15
CAPN3-208ENST00000397204 UHMK1Q8TAS1 419 aaKnown RBP7.87□□□□□ -1.15
CAPN3-208ENST00000397204 DUSP19Q8WTR2 217 aa7.87□□□□□ -1.15
CAPN3-208ENST00000397204 TMEM171Q8WVE6 324 aa7.87□□□□□ -1.15
CAPN3-208ENST00000397204 KAT2AQ92830 837 aa7.87□□□□□ -1.15
CAPN3-208ENST00000397204 MTBPQ96DY7 904 aa7.87□□□□□ -1.15
CAPN3-208ENST00000397204 MRPL57Q9BQC6 102 aaKnown RBP7.87□□□□□ -1.15
CAPN3-208ENST00000397204 PIGQQ9BRB3 760 aa7.87□□□□□ -1.15
CAPN3-208ENST00000397204 C1QTNF3Q9BXJ4 246 aa7.87□□□□□ -1.15
CAPN3-208ENST00000397204 PINK1Q9BXM7 581 aa7.87□□□□□ -1.15
CAPN3-208ENST00000397204 KLHL4Q9C0H6 718 aa7.87□□□□□ -1.15
CAPN3-208ENST00000397204 CXorf56Q9H5V9 222 aa7.87□□□□□ -1.15
CAPN3-208ENST00000397204 FOLH1BQ9HBA9 442 aa7.87□□□□□ -1.15
CAPN3-208ENST00000397204 SLC35C2Q9NQQ7 365 aa7.87□□□□□ -1.15
CAPN3-208ENST00000397204 GIMAP4Q9NUV9 329 aa7.87□□□□□ -1.15
CAPN3-208ENST00000397204 PPP4R1LQ9P1A2 415 aa7.87□□□□□ -1.15
CAPN3-208ENST00000397204 PROCRQ9UNN8 238 aa7.87□□□□□ -1.15
CAPN3-208ENST00000397204 ABCG2Q9UNQ0 655 aa7.87□□□□□ -1.15
CAPN3-208ENST00000397204 OR10H1Q9Y4A9 318 aa7.87□□□□□ -1.15
CAPN3-208ENST00000397204 AP4B1Q9Y6B7 739 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms