RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 SPARTQ8N0X7 666 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 CT45A3Q8NHU0 189 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 RHBDD1Q8TEB9 315 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 LRR1Q96L50 414 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 CASD1Q96PB1 797 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 CCDC106Q9BWC9 280 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 DNAJB4Q9UDY4 337 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 GJE1A6NN92 205 aa11.71□□□□□ -0.53
SMU1-201ENST00000397149 GABRDO14764 452 aa11.71□□□□□ -0.53
SMU1-201ENST00000397149 ADAMTS4O75173 837 aa11.71□□□□□ -0.53
SMU1-201ENST00000397149 MED6O75586 246 aa11.71□□□□□ -0.53
SMU1-201ENST00000397149 CDC34P49427 236 aaPredicted RBP11.71□□□□□ -0.53
SMU1-201ENST00000397149 EXOSC2Q13868 293 aaKnown RBP11.71□□□□□ -0.53
SMU1-201ENST00000397149 PHYHD1Q5SRE7 291 aa11.71□□□□□ -0.53
SMU1-201ENST00000397149 KBTBD6Q86V97 674 aa11.71□□□□□ -0.53
SMU1-201ENST00000397149 KDM8Q8N371 416 aa11.71□□□□□ -0.53
SMU1-201ENST00000397149 TSGA13Q96PP4 275 aa11.71□□□□□ -0.53
SMU1-201ENST00000397149 YIPF1Q9Y548 306 aa11.71□□□□□ -0.53
SMU1-201ENST00000397149 PSAT1Q9Y617 370 aa11.71□□□□□ -0.53
SMU1-201ENST00000397149 PIGBOS1A0A0B4J2F0 54 aa11.71□□□□□ -0.53
SMU1-201ENST00000397149 A6NIN4 97 aa11.71□□□□□ -0.53
SMU1-201ENST00000397149 S100A7P31151 101 aa11.71□□□□□ -0.53
SMU1-201ENST00000397149 ARL2P36404 184 aa11.71□□□□□ -0.53
SMU1-201ENST00000397149 ARSFP54793 590 aa11.71□□□□□ -0.53
SMU1-201ENST00000397149 PIN1Q13526 163 aaPredicted RBP11.71□□□□□ -0.53
SMU1-201ENST00000397149 ADGRF1Q5T601 910 aa11.71□□□□□ -0.53
SMU1-201ENST00000397149 BEST4Q8NFU0 473 aa11.71□□□□□ -0.53
SMU1-201ENST00000397149 DECR2Q9NUI1 292 aa11.71□□□□□ -0.53
SMU1-201ENST00000397149 DTLQ9NZJ0 730 aa11.71□□□□□ -0.53
SMU1-201ENST00000397149 APOBEC3BQ9UH17 382 aaKnown RBP11.71□□□□□ -0.53
SMU1-201ENST00000397149 ARL2-SNX15V9GYD0 113 aa11.71□□□□□ -0.53
SMU1-201ENST00000397149 PRSS51A0A1B0GVH4 220 aa11.71□□□□□ -0.53
SMU1-201ENST00000397149 BTNL10A8MVZ5 291 aa11.71□□□□□ -0.53
SMU1-201ENST00000397149 B4GALT4O60513 344 aa11.71□□□□□ -0.53
SMU1-201ENST00000397149 SHC2P98077 582 aa11.71□□□□□ -0.53
SMU1-201ENST00000397149 OR7A5Q15622 319 aa11.71□□□□□ -0.53
SMU1-201ENST00000397149 ECM1Q16610 540 aa11.71□□□□□ -0.53
SMU1-201ENST00000397149 COQ5Q5HYK3 327 aa11.71□□□□□ -0.53
SMU1-201ENST00000397149 SLC22A25Q6T423 547 aa11.71□□□□□ -0.53
SMU1-201ENST00000397149 FUCA2Q9BTY2 467 aa11.71□□□□□ -0.53
SMU1-201ENST00000397149 KCNMB3Q9NPA1 279 aa11.71□□□□□ -0.53
SMU1-201ENST00000397149 ZIM2Q9NZV7 527 aa11.71□□□□□ -0.53
SMU1-201ENST00000397149 PREX2Q70Z35 1606 aa11.71□□□□□ -0.53
SMU1-201ENST00000397149 GABARAPH6UMI1 98 aa11.71□□□□□ -0.54
SMU1-201ENST00000397149 GABARAPO95166 117 aa11.71□□□□□ -0.54
SMU1-201ENST00000397149 RAB3DO95716 219 aa11.71□□□□□ -0.54
SMU1-201ENST00000397149 C4BPAP04003 597 aaKnown RBP11.71□□□□□ -0.54
SMU1-201ENST00000397149 RAB5CP51148 216 aa11.71□□□□□ -0.54
SMU1-201ENST00000397149 DACT2Q5SW24 774 aa11.71□□□□□ -0.54
SMU1-201ENST00000397149 AADACL3Q5VUY0 350 aa11.71□□□□□ -0.54
SMU1-201ENST00000397149 SYPL2Q5VXT5 272 aa11.71□□□□□ -0.54
SMU1-201ENST00000397149 CLEC1AQ8NC01 280 aa11.71□□□□□ -0.54
SMU1-201ENST00000397149 MICU1Q9BPX6 476 aa11.71□□□□□ -0.54
SMU1-201ENST00000397149 MEPEQ9NQ76 525 aaPredicted RBP11.71□□□□□ -0.54
SMU1-201ENST00000397149 PLSCR3Q9NRY6 295 aa11.71□□□□□ -0.54
SMU1-201ENST00000397149 LIN7CQ9NUP9 197 aaKnown RBP11.71□□□□□ -0.54
SMU1-201ENST00000397149 FAM120CQ9NX05 1096 aaKnown RBP11.71□□□□□ -0.54
SMU1-201ENST00000397149 ZNF816-ZNF321PA0A0X1KG74 233 aa11.71□□□□□ -0.54
SMU1-201ENST00000397149 ITGB8P26012 769 aa11.71□□□□□ -0.54
SMU1-201ENST00000397149 ATG9BQ674R7 924 aa11.71□□□□□ -0.54
SMU1-201ENST00000397149 ZNF321PQ8N8H1 164 aa11.71□□□□□ -0.54
SMU1-201ENST00000397149 UBAC2Q8NBM4 344 aa11.71□□□□□ -0.54
SMU1-201ENST00000397149 DPH2Q9BQC3 489 aaPredicted RBP11.71□□□□□ -0.54
SMU1-201ENST00000397149 RFPL2O75678 378 aa11.7□□□□□ -0.54
SMU1-201ENST00000397149 OXSR1O95747 527 aaPredicted RBP11.7□□□□□ -0.54
SMU1-201ENST00000397149 ADH1BP00325 375 aa11.7□□□□□ -0.54
SMU1-201ENST00000397149 HTR7P34969 479 aa11.7□□□□□ -0.54
SMU1-201ENST00000397149 GNB2P62879 340 aa11.7□□□□□ -0.54
SMU1-201ENST00000397149 RFTN1Q14699 578 aaPredicted RBP11.7□□□□□ -0.54
SMU1-201ENST00000397149 OR5M10Q6IEU7 315 aa11.7□□□□□ -0.54
SMU1-201ENST00000397149 MAMDC4Q6UXC1 1216 aa11.7□□□□□ -0.54
SMU1-201ENST00000397149 LARP4Q71RC2 724 aaKnown RBP eCLIP11.7□□□□□ -0.54
SMU1-201ENST00000397149 ZDHHC7Q9NXF8 308 aa11.7□□□□□ -0.54
SMU1-201ENST00000397149 KLHL21Q9UJP4 597 aa11.7□□□□□ -0.54
SMU1-201ENST00000397149 TIMM8AO60220 97 aaPredicted RBP11.7□□□□□ -0.54
SMU1-201ENST00000397149 BIDP55957 195 aa11.7□□□□□ -0.54
SMU1-201ENST00000397149 ZNF92Q03936 586 aa11.7□□□□□ -0.54
SMU1-201ENST00000397149 PEA15Q15121 130 aa11.7□□□□□ -0.54
SMU1-201ENST00000397149 TP53I3Q53FA7 332 aa11.7□□□□□ -0.54
SMU1-201ENST00000397149 CATSPEREQ5SY80 951 aa11.7□□□□□ -0.54
SMU1-201ENST00000397149 MEDAGQ5VYS4 303 aa11.7□□□□□ -0.54
SMU1-201ENST00000397149 LRRC25Q8N386 305 aaPredicted RBP11.7□□□□□ -0.54
SMU1-201ENST00000397149 IRF7Q92985 503 aa11.7□□□□□ -0.54
SMU1-201ENST00000397149 FOXRED1Q96CU9 486 aaPredicted RBP11.7□□□□□ -0.54
SMU1-201ENST00000397149 F2RL3Q96RI0 385 aa11.7□□□□□ -0.54
SMU1-201ENST00000397149 FAM198AQ9UFP1 575 aa11.7□□□□□ -0.54
SMU1-201ENST00000397149 CAPNS1P04632 268 aa11.7□□□□□ -0.54
SMU1-201ENST00000397149 SCGB1C2P0DMR2 95 aa11.7□□□□□ -0.54
SMU1-201ENST00000397149 ETV3P41162 512 aa11.7□□□□□ -0.54
SMU1-201ENST00000397149 SOX9P48436 509 aa11.7□□□□□ -0.54
SMU1-201ENST00000397149 FLI1Q01543 452 aaPredicted RBP11.7□□□□□ -0.54
SMU1-201ENST00000397149 KIAA0930Q6ICG6 404 aaPredicted RBP11.7□□□□□ -0.54
SMU1-201ENST00000397149 DRICH1Q6PGQ1 229 aaPredicted RBP11.7□□□□□ -0.54
SMU1-201ENST00000397149 ESPNLQ6ZVH7 1005 aa11.7□□□□□ -0.54
SMU1-201ENST00000397149 PRICKLE2Q7Z3G6 844 aa11.7□□□□□ -0.54
SMU1-201ENST00000397149 EGFL6Q8IUX8 553 aa11.7□□□□□ -0.54
SMU1-201ENST00000397149 SULF2Q8IWU5 870 aa11.7□□□□□ -0.54
SMU1-201ENST00000397149 OR4Q3Q8NH05 313 aa11.7□□□□□ -0.54
SMU1-201ENST00000397149 GIMAP1Q8WWP7 306 aa11.7□□□□□ -0.54
SMU1-201ENST00000397149 CPEB1Q9BZB8 566 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms