RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 SLC1A4P43007 532 aa4.06□□□□□ -1.76
HMGB1P10-201ENST00000395823 RPS6P62753 249 aaKnown RBP4.06□□□□□ -1.76
HMGB1P10-201ENST00000395823 EIF2B1Q14232 305 aaKnown RBP4.06□□□□□ -1.76
HMGB1P10-201ENST00000395823 CAVIN4Q5BKX8 364 aa4.06□□□□□ -1.76
HMGB1P10-201ENST00000395823 APOOLQ6UXV4 268 aa4.06□□□□□ -1.76
HMGB1P10-201ENST00000395823 LANCL3Q6ZV70 420 aa4.06□□□□□ -1.76
HMGB1P10-201ENST00000395823 ANKRD37Q7Z713 158 aa4.06□□□□□ -1.76
HMGB1P10-201ENST00000395823 ZNF248Q8NDW4 579 aa4.06□□□□□ -1.76
HMGB1P10-201ENST00000395823 M1APQ8TC57 530 aa4.06□□□□□ -1.76
HMGB1P10-201ENST00000395823 HCAR2Q8TDS4 363 aa4.06□□□□□ -1.76
HMGB1P10-201ENST00000395823 LRRC15Q8TF66 581 aa4.06□□□□□ -1.76
HMGB1P10-201ENST00000395823 RLN3Q8WXF3 142 aa4.06□□□□□ -1.76
HMGB1P10-201ENST00000395823 FAM3CQ92520 227 aa4.06□□□□□ -1.76
HMGB1P10-201ENST00000395823 C18orf25Q96B23 403 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P10-201ENST00000395823 COMMD4Q9H0A8 199 aa4.06□□□□□ -1.76
HMGB1P10-201ENST00000395823 RNF41Q9H4P4 317 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P10-201ENST00000395823 ELOVL3Q9HB03 270 aa4.06□□□□□ -1.76
HMGB1P10-201ENST00000395823 RAB18Q9NP72 206 aa4.06□□□□□ -1.76
HMGB1P10-201ENST00000395823 COX16Q9P0S2 106 aa4.06□□□□□ -1.76
HMGB1P10-201ENST00000395823 CIDEBQ9UHD4 219 aa4.06□□□□□ -1.76
HMGB1P10-201ENST00000395823 MGAT4AQ9UM21 535 aa4.06□□□□□ -1.76
HMGB1P10-201ENST00000395823 PTCH1Q13635 1447 aa4.05□□□□□ -1.76
HMGB1P10-201ENST00000395823 C15orf38-AP3S2A0A0A6YYH1 394 aa4.05□□□□□ -1.76
HMGB1P10-201ENST00000395823 IGHV3-16A0A0C4DH30 117 aa4.05□□□□□ -1.76
HMGB1P10-201ENST00000395823 GSAPA4D1B5 854 aa4.05□□□□□ -1.76
HMGB1P10-201ENST00000395823 RPL37AP8A6NKH3 93 aa4.05□□□□□ -1.76
HMGB1P10-201ENST00000395823 FAM74A7A6NL05 159 aa4.05□□□□□ -1.76
HMGB1P10-201ENST00000395823 DCXO43602 365 aa4.05□□□□□ -1.76
HMGB1P10-201ENST00000395823 SURF6O75683 361 aaKnown RBP4.05□□□□□ -1.76
HMGB1P10-201ENST00000395823 TPSB2P20231 275 aa4.05□□□□□ -1.76
HMGB1P10-201ENST00000395823 CD9P21926 228 aa4.05□□□□□ -1.76
HMGB1P10-201ENST00000395823 RPL4P36578 427 aaKnown RBP4.05□□□□□ -1.76
HMGB1P10-201ENST00000395823 MAGEA5P43359 124 aa4.05□□□□□ -1.76
HMGB1P10-201ENST00000395823 SLC7A2P52569 658 aa4.05□□□□□ -1.76
HMGB1P10-201ENST00000395823 ATP12AP54707 1039 aa4.05□□□□□ -1.76
HMGB1P10-201ENST00000395823 MFAP2P55001 183 aa4.05□□□□□ -1.76
HMGB1P10-201ENST00000395823 CD300CQ08708 224 aa4.05□□□□□ -1.76
HMGB1P10-201ENST00000395823 RIPK1Q13546 671 aa4.05□□□□□ -1.76
HMGB1P10-201ENST00000395823 TPSAB1Q15661 275 aa4.05□□□□□ -1.76
HMGB1P10-201ENST00000395823 TPD52L1Q16890 204 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P10-201ENST00000395823 FAM74A3Q4VXF1 159 aa4.05□□□□□ -1.76
HMGB1P10-201ENST00000395823 CCDC122Q5T0U0 273 aa4.05□□□□□ -1.76
HMGB1P10-201ENST00000395823 REG3GQ6UW15 175 aa4.05□□□□□ -1.76
HMGB1P10-201ENST00000395823 KIAA1328Q86T90 577 aa4.05□□□□□ -1.76
HMGB1P10-201ENST00000395823 RNF130Q86XS8 419 aa4.05□□□□□ -1.76
HMGB1P10-201ENST00000395823 DRAXINQ8NBI3 349 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P10-201ENST00000395823 FNDC8Q8TC99 324 aa4.05□□□□□ -1.76
HMGB1P10-201ENST00000395823 WBP1Q96G27 269 aa4.05□□□□□ -1.76
HMGB1P10-201ENST00000395823 ELMO2Q96JJ3 720 aa4.05□□□□□ -1.76
HMGB1P10-201ENST00000395823 POM121L2Q96KW2 1035 aa4.05□□□□□ -1.76
HMGB1P10-201ENST00000395823 OPRPNQ99935 248 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P10-201ENST00000395823 SYT11Q9BT88 431 aa4.05□□□□□ -1.76
HMGB1P10-201ENST00000395823 MEPEQ9NQ76 525 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P10-201ENST00000395823 WWOXQ9NZC7 414 aa4.05□□□□□ -1.76
HMGB1P10-201ENST00000395823 RCOR3Q9P2K3 495 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P10-201ENST00000395823 ANAPC7Q9UJX3 599 aa4.05□□□□□ -1.76
HMGB1P10-201ENST00000395823 CPQQ9Y646 472 aa4.05□□□□□ -1.76
HMGB1P10-201ENST00000395823 DDX49Q9Y6V7 483 aaKnown RBP4.05□□□□□ -1.76
HMGB1P10-201ENST00000395823 ZSCAN5BA6NJL1 495 aa4.04□□□□□ -1.76
HMGB1P10-201ENST00000395823 STX7O15400 261 aaKnown RBP4.04□□□□□ -1.76
HMGB1P10-201ENST00000395823 PPIHO43447 177 aaKnown RBP4.04□□□□□ -1.76
HMGB1P10-201ENST00000395823 TYROBPO43914 113 aa4.04□□□□□ -1.76
HMGB1P10-201ENST00000395823 SNNO75324 88 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P10-201ENST00000395823 RHOBTB1O94844 696 aa4.04□□□□□ -1.76
HMGB1P10-201ENST00000395823 TBXA2RP21731 343 aa4.04□□□□□ -1.76
HMGB1P10-201ENST00000395823 PCMT1P22061 227 aa4.04□□□□□ -1.76
HMGB1P10-201ENST00000395823 PSMA2P25787 234 aa4.04□□□□□ -1.76
HMGB1P10-201ENST00000395823 LMO2P25791 158 aa4.04□□□□□ -1.76
HMGB1P10-201ENST00000395823 BDKRB1P46663 353 aa4.04□□□□□ -1.76
HMGB1P10-201ENST00000395823 PLA2G16P53816 162 aa4.04□□□□□ -1.76
HMGB1P10-201ENST00000395823 OSTNP61366 133 aa4.04□□□□□ -1.76
HMGB1P10-201ENST00000395823 IL9RQ01113 521 aa4.04□□□□□ -1.76
HMGB1P10-201ENST00000395823 EWSR1Q01844 656 aaKnown RBP eCLIP4.04□□□□□ -1.76
HMGB1P10-201ENST00000395823 RAB35Q15286 201 aa4.04□□□□□ -1.76
HMGB1P10-201ENST00000395823 ZIC1Q15915 447 aa4.04□□□□□ -1.76
HMGB1P10-201ENST00000395823 TATDN3Q17R31 274 aa4.04□□□□□ -1.76
HMGB1P10-201ENST00000395823 C17orf58Q2M2W7 97 aa4.04□□□□□ -1.76
HMGB1P10-201ENST00000395823 GGTA1PQ4G0N0 100 aa4.04□□□□□ -1.76
HMGB1P10-201ENST00000395823 LRRC23Q53EV4 343 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P10-201ENST00000395823 CYBRD1Q53TN4 286 aa4.04□□□□□ -1.76
HMGB1P10-201ENST00000395823 C2CD6Q53TS8 623 aa4.04□□□□□ -1.76
HMGB1P10-201ENST00000395823 SLX4IPQ5VYV7 408 aa4.04□□□□□ -1.76
HMGB1P10-201ENST00000395823 ZNF613Q6PF04 617 aa4.04□□□□□ -1.76
HMGB1P10-201ENST00000395823 HSD11B1LQ7Z5J1 315 aa4.04□□□□□ -1.76
HMGB1P10-201ENST00000395823 ANKFN1Q8N957 763 aa4.04□□□□□ -1.76
HMGB1P10-201ENST00000395823 EIF1ADQ8N9N8 165 aaKnown RBP4.04□□□□□ -1.76
HMGB1P10-201ENST00000395823 EMG1Q92979 244 aaKnown RBP4.04□□□□□ -1.76
HMGB1P10-201ENST00000395823 TUBGCP3Q96CW5 907 aa4.04□□□□□ -1.76
HMGB1P10-201ENST00000395823 SLC45A3Q96JT2 553 aa4.04□□□□□ -1.76
HMGB1P10-201ENST00000395823 ZNF597Q96LX8 424 aa4.04□□□□□ -1.76
HMGB1P10-201ENST00000395823 CCDC94Q9BW85 323 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P10-201ENST00000395823 STMN4Q9H169 189 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P10-201ENST00000395823 VCX2Q9H322 139 aa4.04□□□□□ -1.76
HMGB1P10-201ENST00000395823 ELL3Q9HB65 397 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P10-201ENST00000395823 POLD4Q9HCU8 107 aa4.04□□□□□ -1.76
HMGB1P10-201ENST00000395823 ZDHHC18Q9NUE0 388 aa4.04□□□□□ -1.76
HMGB1P10-201ENST00000395823 CTSZQ9UBR2 303 aa4.04□□□□□ -1.76
HMGB1P10-201ENST00000395823 RNF14Q9UBS8 474 aa4.04□□□□□ -1.76
HMGB1P10-201ENST00000395823 CYTH4Q9UIA0 394 aa4.04□□□□□ -1.76
HMGB1P10-201ENST00000395823 EIF3LQ9Y262 564 aaKnown RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms