RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 COL26A1Q96A83 441 aa13.42□□□□□ -0.26
CLIP2-203ENST00000395060 BBS4Q96RK4 519 aa13.42□□□□□ -0.26
CLIP2-203ENST00000395060 PIGUQ9H490 435 aa13.42□□□□□ -0.26
CLIP2-203ENST00000395060 OSGEPL1Q9H4B0 414 aa13.42□□□□□ -0.26
CLIP2-203ENST00000395060 METTL17Q9H7H0 456 aaPredicted RBP13.42□□□□□ -0.26
CLIP2-203ENST00000395060 SZT2Q5T011 3432 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 SNTNA6NMZ2 147 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 HOXA2O43364 376 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 TBX6O95947 436 aaPredicted RBP13.41□□□□□ -0.26
CLIP2-203ENST00000395060 CTSLP07711 333 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 PTHLHP12272 177 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 TIMP2P16035 220 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 HCCSP53701 268 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 MINDY4Q4G0A6 757 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 HENMT1Q5T8I9 393 aaKnown RBP13.41□□□□□ -0.26
CLIP2-203ENST00000395060 CEACAM19Q7Z692 300 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 KIAA0907Q7Z7F0 614 aaPredicted RBP13.41□□□□□ -0.26
CLIP2-203ENST00000395060 CYB561A3Q8NBI2 242 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 UXS1Q8NBZ7 420 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 PXYLP1Q8TE99 480 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 TMEM255BQ8WV15 326 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 OR5P2Q8WZ92 322 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 SOSTQ9BQB4 213 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 MED18Q9BUE0 208 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 C1QTNF7Q9BXJ2 289 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 GLIPR2Q9H4G4 154 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 RETREG1Q9H6L5 497 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 A4GALTQ9NPC4 353 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 HINT3Q9NQE9 182 aaKnown RBP13.41□□□□□ -0.26
CLIP2-203ENST00000395060 NDOR1Q9UHB4 597 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 EXOSC1Q9Y3B2 195 aaKnown RBP13.41□□□□□ -0.26
CLIP2-203ENST00000395060 A0A1W2PRQ8 180 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 SLC9B1P1A6NJY1 282 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 H3BUI4 141 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 J3QLW9 94 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 LGALS8O00214 317 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 POP7O75817 140 aaKnown RBP13.41□□□□□ -0.26
CLIP2-203ENST00000395060 HPXP02790 462 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 TCRBP04435 133 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 SRPRAP08240 638 aaKnown RBP13.41□□□□□ -0.26
CLIP2-203ENST00000395060 CLUP10909 449 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 ACADMP11310 421 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 HOXB3P14651 431 aaPredicted RBP13.41□□□□□ -0.26
CLIP2-203ENST00000395060 ZNF19P17023 458 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 POLR2CP19387 275 aaPredicted RBP13.41□□□□□ -0.26
CLIP2-203ENST00000395060 PAICSP22234 425 aaKnown RBP13.41□□□□□ -0.26
CLIP2-203ENST00000395060 BTCP35070 178 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 RPL3P39023 403 aaKnown RBP13.41□□□□□ -0.26
CLIP2-203ENST00000395060 SMIM11AP58511 58 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 OC90Q02509 493 aaPredicted RBP13.41□□□□□ -0.26
CLIP2-203ENST00000395060 DSG2Q14126 1118 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 ELOAQ14241 798 aaKnown RBP13.41□□□□□ -0.26
CLIP2-203ENST00000395060 ST3GAL2Q16842 350 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 PLA1AQ53H76 456 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 ZNF311Q5JNZ3 666 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 EOGTQ5NDL2 527 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 FAM83HQ6ZRV2 1179 aaPredicted RBP13.41□□□□□ -0.26
CLIP2-203ENST00000395060 TRILQ7L0X0 811 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 LIX1LQ8IVB5 337 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 SERPINA12Q8IW75 414 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 ZBTB44Q8NCP5 570 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 WDR89Q96FK6 387 aaPredicted RBP13.41□□□□□ -0.26
CLIP2-203ENST00000395060 ZC3HAV1LQ96H79 300 aaKnown RBP13.41□□□□□ -0.26
CLIP2-203ENST00000395060 HCAR1Q9BXC0 346 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 XKR8Q9H6D3 395 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 ADAM30Q9UKF2 790 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 ELF5Q9UKW6 265 aaPredicted RBP13.41□□□□□ -0.26
CLIP2-203ENST00000395060 PLXNB3Q9ULL4 1909 aa13.41□□□□□ -0.26
CLIP2-203ENST00000395060 SCN2AQ99250 2005 aa13.4□□□□□ -0.26
CLIP2-203ENST00000395060 ALPK2Q86TB3 2170 aa13.4□□□□□ -0.26
CLIP2-203ENST00000395060 ATP6V1G2-DDX39BF2Z307 99 aa13.4□□□□□ -0.26
CLIP2-203ENST00000395060 LEFTY2O00292 366 aa13.4□□□□□ -0.26
CLIP2-203ENST00000395060 ANKRD34CP0C6C1 535 aa13.4□□□□□ -0.26
CLIP2-203ENST00000395060 SSR2P43308 183 aa13.4□□□□□ -0.26
CLIP2-203ENST00000395060 PITPNBP48739 271 aa13.4□□□□□ -0.26
CLIP2-203ENST00000395060 FAAH2Q6GMR7 532 aa13.4□□□□□ -0.26
CLIP2-203ENST00000395060 FAM92BQ6ZTR7 304 aa13.4□□□□□ -0.26
CLIP2-203ENST00000395060 OR51L1Q8NGJ5 315 aa13.4□□□□□ -0.26
CLIP2-203ENST00000395060 AUNIPQ9H7T9 357 aa13.4□□□□□ -0.26
CLIP2-203ENST00000395060 FOLH1BQ9HBA9 442 aa13.4□□□□□ -0.26
CLIP2-203ENST00000395060 HCFC1R1Q9NWW0 138 aa13.4□□□□□ -0.26
CLIP2-203ENST00000395060 INSL5Q9Y5Q6 135 aa13.4□□□□□ -0.26
CLIP2-203ENST00000395060 SCN3AQ9NY46 2000 aa13.4□□□□□ -0.26
CLIP2-203ENST00000395060 FOXE1O00358 373 aaPredicted RBP13.4□□□□□ -0.26
CLIP2-203ENST00000395060 PGRMC2O15173 223 aa13.4□□□□□ -0.26
CLIP2-203ENST00000395060 SHOXO15266 292 aa13.4□□□□□ -0.26
CLIP2-203ENST00000395060 HLA-DQB1P01920 261 aa13.4□□□□□ -0.26
CLIP2-203ENST00000395060 FGF9P31371 208 aaPredicted RBP13.4□□□□□ -0.26
CLIP2-203ENST00000395060 RFX3P48380 749 aa13.4□□□□□ -0.26
CLIP2-203ENST00000395060 SELENOPP49908 381 aa13.4□□□□□ -0.26
CLIP2-203ENST00000395060 AANATQ16613 207 aa13.4□□□□□ -0.26
CLIP2-203ENST00000395060 KHDRBS2Q5VWX1 349 aaKnown RBP13.4□□□□□ -0.26
CLIP2-203ENST00000395060 TMEM215Q68D42 235 aa13.4□□□□□ -0.26
CLIP2-203ENST00000395060 ZNF322Q6U7Q0 402 aaPredicted RBP13.4□□□□□ -0.26
CLIP2-203ENST00000395060 DGLUCYQ7Z3D6 616 aa13.4□□□□□ -0.26
CLIP2-203ENST00000395060 IQCF2Q8IXL9 164 aa13.4□□□□□ -0.26
CLIP2-203ENST00000395060 CRIPAKQ8N1N5 446 aa13.4□□□□□ -0.26
CLIP2-203ENST00000395060 VN1R2Q8NFZ6 395 aa13.4□□□□□ -0.26
CLIP2-203ENST00000395060 OVCA2Q8WZ82 227 aa13.4□□□□□ -0.26
CLIP2-203ENST00000395060 TMEM175Q9BSA9 504 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms