RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 SLC16A11Q8NCK7 471 aa8.01□□□□□ -1.13
ATG4A-205ENST00000394892 OR7A2PQ8NGA2 310 aa8.01□□□□□ -1.13
ATG4A-205ENST00000394892 OR4C3Q8NH37 302 aa8.01□□□□□ -1.13
ATG4A-205ENST00000394892 OR14L1PQ8NHC6 308 aa8.01□□□□□ -1.13
ATG4A-205ENST00000394892 FBXO30Q8TB52 745 aa8.01□□□□□ -1.13
ATG4A-205ENST00000394892 FAM110BQ8TC76 370 aa8.01□□□□□ -1.13
ATG4A-205ENST00000394892 AGR3Q8TD06 166 aa8.01□□□□□ -1.13
ATG4A-205ENST00000394892 DUSP19Q8WTR2 217 aa8.01□□□□□ -1.13
ATG4A-205ENST00000394892 CAVIN3Q969G5 261 aa8.01□□□□□ -1.13
ATG4A-205ENST00000394892 OTUB1Q96FW1 271 aaPredicted RBP8.01□□□□□ -1.13
ATG4A-205ENST00000394892 PKNOX2Q96KN3 472 aa8.01□□□□□ -1.13
ATG4A-205ENST00000394892 TRMOQ9BU70 441 aa8.01□□□□□ -1.13
ATG4A-205ENST00000394892 POLDIP3Q9BY77 421 aaKnown RBP8.01□□□□□ -1.13
ATG4A-205ENST00000394892 STMN4Q9H169 189 aaPredicted RBP8.01□□□□□ -1.13
ATG4A-205ENST00000394892 REEP4Q9H6H4 257 aa8.01□□□□□ -1.13
ATG4A-205ENST00000394892 CALHM2Q9HA72 323 aa8.01□□□□□ -1.13
ATG4A-205ENST00000394892 EQTNQ9NQ60 294 aa8.01□□□□□ -1.13
ATG4A-205ENST00000394892 MIEF1Q9NQG6 463 aa8.01□□□□□ -1.13
ATG4A-205ENST00000394892 DDX18Q9NVP1 670 aaKnown RBP8.01□□□□□ -1.13
ATG4A-205ENST00000394892 ZNF629Q9UEG4 869 aaPredicted RBP8.01□□□□□ -1.13
ATG4A-205ENST00000394892 CBLCQ9ULV8 474 aa8.01□□□□□ -1.13
ATG4A-205ENST00000394892 MRPS18CQ9Y3D5 142 aaKnown RBP8.01□□□□□ -1.13
ATG4A-205ENST00000394892 KCNE3Q9Y6H6 103 aa8.01□□□□□ -1.13
ATG4A-205ENST00000394892 MTORP42345 2549 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 NF1P21359 2839 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 HRNRQ86YZ3 2850 aaPredicted RBP8□□□□□ -1.13
ATG4A-205ENST00000394892 IGLV3-32A0A0A0MS00 114 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 TNFSF12-TNFSF13A0A0A6YY99 330 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 FAM47E-STBD1D6RA91 191 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 PDPK1O15530 556 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 OIP5O43482 229 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 RGS14O43566 566 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 PEX11AO75192 247 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 COQ9O75208 318 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 TNFSF13O75888 250 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 SLU7O95391 586 aaKnown RBP8□□□□□ -1.13
ATG4A-205ENST00000394892 UTS2O95399 124 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 C1QCP02747 245 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 BPGMP07738 259 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 IFI6P09912 130 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 HOXB4P17483 251 aaPredicted RBP8□□□□□ -1.13
ATG4A-205ENST00000394892 DNASE1P24855 282 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 CTSSP25774 331 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 IL12BP29460 328 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 NTSP30990 170 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 UQCRC1P31930 480 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 ASCL1P50553 236 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 CLDN20P56880 219 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 MRPS22P82650 360 aaKnown RBP8□□□□□ -1.13
ATG4A-205ENST00000394892 ZNF844Q08AG5 666 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 STX5Q13190 355 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 PTGR1Q14914 329 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 DUSP5Q16690 384 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 GALNTL6Q49A17 601 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 C6orf136Q5SQH8 315 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 MFSD12Q6NUT3 480 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 LSRQ86X29 649 aaPredicted RBP8□□□□□ -1.13
ATG4A-205ENST00000394892 RIMKLAQ8IXN7 391 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 PM20D2Q8IYS1 436 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 GCNT2Q8N0V5 402 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 CNPY4Q8N129 248 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 RIBC1Q8N443 379 aaPredicted RBP8□□□□□ -1.13
ATG4A-205ENST00000394892 MREGQ8N565 214 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 GOT1L1Q8NHS2 421 aaPredicted RBP8□□□□□ -1.13
ATG4A-205ENST00000394892 LINC01560Q8TB33 94 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 FIG4Q92562 907 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 RNASE6Q93091 150 aaKnown RBP8□□□□□ -1.13
ATG4A-205ENST00000394892 LRRC46Q96FV0 321 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 RMND5BQ96G75 393 aaPredicted RBP8□□□□□ -1.13
ATG4A-205ENST00000394892 YIPF4Q9BSR8 244 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 C1orf50Q9BV19 199 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 PARD6BQ9BYG5 372 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 ROPN1BQ9BZX4 212 aaPredicted RBP8□□□□□ -1.13
ATG4A-205ENST00000394892 CXXC4Q9H2H0 198 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 ROPN1Q9HAT0 212 aaPredicted RBP8□□□□□ -1.13
ATG4A-205ENST00000394892 CCM2LQ9NUG4 571 aaPredicted RBP8□□□□□ -1.13
ATG4A-205ENST00000394892 FAM120CQ9NX05 1096 aaKnown RBP8□□□□□ -1.13
ATG4A-205ENST00000394892 ATP6V1HQ9UI12 483 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 ZNF337Q9Y3M9 751 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 OR10H1Q9Y4A9 318 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 ITPR3Q14573 2671 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 HCFC1P51610 2035 aa8□□□□□ -1.13
ATG4A-205ENST00000394892 PHF3Q92576 2039 aaKnown RBP8□□□□□ -1.13
ATG4A-205ENST00000394892 INTS1Q8N201 2190 aaKnown RBP8□□□□□ -1.13
ATG4A-205ENST00000394892 ANKHD1Q8IWZ3 2542 aaKnown RBP7.99□□□□□ -1.13
ATG4A-205ENST00000394892 OR2M5A3KFT3 312 aa7.99□□□□□ -1.13
ATG4A-205ENST00000394892 SCAMP2O15127 329 aaKnown RBP7.99□□□□□ -1.13
ATG4A-205ENST00000394892 ZNF500O60304 480 aaPredicted RBP7.99□□□□□ -1.13
ATG4A-205ENST00000394892 SLITRK5O94991 958 aa7.99□□□□□ -1.13
ATG4A-205ENST00000394892 KCNK2O95069 426 aa7.99□□□□□ -1.13
ATG4A-205ENST00000394892 RCBTB2O95199 551 aa7.99□□□□□ -1.13
ATG4A-205ENST00000394892 IL18BPO95998 194 aa7.99□□□□□ -1.13
ATG4A-205ENST00000394892 IL2RAP01589 272 aa7.99□□□□□ -1.13
ATG4A-205ENST00000394892 DHRS4L1P0CG22 281 aa7.99□□□□□ -1.13
ATG4A-205ENST00000394892 PRPS2P11908 318 aa7.99□□□□□ -1.13
ATG4A-205ENST00000394892 NEFHP12036 1026 aa7.99□□□□□ -1.13
ATG4A-205ENST00000394892 CHMP24386 653 aa7.99□□□□□ -1.13
ATG4A-205ENST00000394892 PSMA4P25789 261 aaKnown RBP7.99□□□□□ -1.13
ATG4A-205ENST00000394892 RFX3P48380 749 aa7.99□□□□□ -1.13
ATG4A-205ENST00000394892 RNF144AP50876 292 aaPredicted RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms