RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 PEX5LQ8IYB4 626 aa14.34□□□□□ -0.11
CPSF7-202ENST00000394888 TDRD6O60522 2096 aaKnown RBP14.33□□□□□ -0.11
CPSF7-202ENST00000394888 TBC1D3DA0A087WVF3 549 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 TBC1D3IA0A087WXS9 549 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 TBC1D3EA0A087X179 549 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 TBC1D3KA0A087X1G2 549 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 TBC1D3FA6NER0 549 aaPredicted RBP14.33□□□□□ -0.12
CPSF7-202ENST00000394888 FAM170BA6NMN3 283 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 TBC1D3LB9A6J9 549 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 TBC1D3HP0C7X1 549 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 UBE2IP63279 158 aaKnown RBP14.33□□□□□ -0.12
CPSF7-202ENST00000394888 ADAM15Q13444 863 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 TBC1D3GQ6DHY5 549 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 TBC1D3CQ6IPX1 549 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 CASP12Q6UXS9 341 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 GDPGP1Q6ZNW5 385 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 TBC1D3Q8IZP1 549 aaPredicted RBP14.33□□□□□ -0.12
CPSF7-202ENST00000394888 SIRT6Q8N6T7 355 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 OR5T3Q8NGG3 340 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 OR52P1PQ8NH57 321 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 GNPDA2Q8TDQ7 276 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 GANCQ8TET4 914 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 FAM3CQ92520 227 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 RNFT2Q96EX2 444 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 SENP5Q96HI0 755 aaPredicted RBP14.33□□□□□ -0.12
CPSF7-202ENST00000394888 MS4A4EQ96PG1 132 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 RACGAP1Q9H0H5 632 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 SEC14L4Q9UDX3 406 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 IL20RAQ9UHF4 553 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 PEX16Q9Y5Y5 336 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 AP3D1O14617 1153 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 FGF17O60258 216 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 ALPPP05187 535 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 MAKP20794 623 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 PPP2R1BP30154 601 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 GPR4P46093 362 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 RAB40BQ12829 278 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 PRICKLE4Q2TBC4 344 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 SLC30A6Q6NXT4 461 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 ENPP7Q6UWV6 458 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 RNF44Q7L0R7 432 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 LRRC25Q8N386 305 aaPredicted RBP14.33□□□□□ -0.12
CPSF7-202ENST00000394888 LINC00471Q8N535 108 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 ANKK1Q8NFD2 765 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 TP53INP1Q96A56 240 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 MRPL38Q96DV4 380 aaKnown RBP14.33□□□□□ -0.12
CPSF7-202ENST00000394888 NEDD4LQ96PU5 975 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 TMEM106CQ9BVX2 250 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 POLR2J2Q9GZM3 115 aaKnown RBP14.33□□□□□ -0.12
CPSF7-202ENST00000394888 SIRT4Q9Y6E7 314 aaPredicted RBP14.33□□□□□ -0.12
CPSF7-202ENST00000394888 F5P12259 2224 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 HEATR5AQ86XA9 2040 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 SAGE2PA6NJ88 616 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 HRO43593 1189 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 S1PR1P21453 382 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 PRR5P85299 388 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 MBOAT2Q6ZWT7 520 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 RAB42Q8N4Z0 105 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 LCN9Q8WX39 176 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 SLC9A6Q92581 669 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 ORAI3Q9BRQ5 295 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 VPS13AQ96RL7 3174 aa14.33□□□□□ -0.12
CPSF7-202ENST00000394888 TRBV23OR9-2A0A075B6M9 112 aa14.32□□□□□ -0.12
CPSF7-202ENST00000394888 PEX12O00623 359 aa14.32□□□□□ -0.12
CPSF7-202ENST00000394888 BHLHE40O14503 412 aa14.32□□□□□ -0.12
CPSF7-202ENST00000394888 ATP1B1P05026 303 aa14.32□□□□□ -0.12
CPSF7-202ENST00000394888 HOXB2P14652 356 aa14.32□□□□□ -0.12
CPSF7-202ENST00000394888 AVPR1BP47901 424 aa14.32□□□□□ -0.12
CPSF7-202ENST00000394888 SMSP52788 366 aa14.32□□□□□ -0.12
CPSF7-202ENST00000394888 WNT4P56705 351 aa14.32□□□□□ -0.12
CPSF7-202ENST00000394888 DEFB134Q4QY38 66 aa14.32□□□□□ -0.12
CPSF7-202ENST00000394888 SLC27A4Q6P1M0 643 aa14.32□□□□□ -0.12
CPSF7-202ENST00000394888 ZNF438Q7Z4V0 828 aa14.32□□□□□ -0.12
CPSF7-202ENST00000394888 ACOT11Q8WXI4 607 aaPredicted RBP14.32□□□□□ -0.12
CPSF7-202ENST00000394888 ANKRD9Q96BM1 317 aaPredicted RBP14.32□□□□□ -0.12
CPSF7-202ENST00000394888 PHOX2BQ99453 314 aa14.32□□□□□ -0.12
CPSF7-202ENST00000394888 TM9SF2Q99805 663 aa14.32□□□□□ -0.12
CPSF7-202ENST00000394888 KATNB1Q9BVA0 655 aa14.32□□□□□ -0.12
CPSF7-202ENST00000394888 KLHL25Q9H0H3 589 aa14.32□□□□□ -0.12
CPSF7-202ENST00000394888 SIAEQ9HAT2 523 aa14.32□□□□□ -0.12
CPSF7-202ENST00000394888 CHCHD3Q9NX63 227 aaKnown RBP14.32□□□□□ -0.12
CPSF7-202ENST00000394888 A0A0B4J293 547 aa14.32□□□□□ -0.12
CPSF7-202ENST00000394888 ATP6V1G1O75348 118 aa14.32□□□□□ -0.12
CPSF7-202ENST00000394888 IGHV4-34P06331 123 aa14.32□□□□□ -0.12
CPSF7-202ENST00000394888 STXBP1P61764 594 aaKnown RBP14.32□□□□□ -0.12
CPSF7-202ENST00000394888 TRAM2Q15035 370 aa14.32□□□□□ -0.12
CPSF7-202ENST00000394888 PRRT3Q5FWE3 981 aa14.32□□□□□ -0.12
CPSF7-202ENST00000394888 USP30Q70CQ3 517 aa14.32□□□□□ -0.12
CPSF7-202ENST00000394888 OR4F15Q8NGB8 312 aa14.32□□□□□ -0.12
CPSF7-202ENST00000394888 GATAD2BQ8WXI9 593 aa14.32□□□□□ -0.12
CPSF7-202ENST00000394888 RNF31Q96EP0 1072 aa14.32□□□□□ -0.12
CPSF7-202ENST00000394888 SLC41A3Q96GZ6 507 aa14.32□□□□□ -0.12
CPSF7-202ENST00000394888 ISYNA1Q9NPH2 558 aa14.32□□□□□ -0.12
CPSF7-202ENST00000394888 PRDM9Q9NQV7 894 aa14.32□□□□□ -0.12
CPSF7-202ENST00000394888 ENTPD4Q9Y227 616 aa14.32□□□□□ -0.12
CPSF7-202ENST00000394888 HEBP2Q9Y5Z4 205 aa14.32□□□□□ -0.12
CPSF7-202ENST00000394888 NGFRP08138 427 aa14.31□□□□□ -0.12
CPSF7-202ENST00000394888 PVRP15151 417 aa14.31□□□□□ -0.12
CPSF7-202ENST00000394888 TGM3Q08188 693 aa14.31□□□□□ -0.12
CPSF7-202ENST00000394888 PLK5Q496M5 336 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms