RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 YIPF6Q96EC8 236 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 TOE1Q96GM8 510 aaKnown RBP5.37□□□□□ -1.55
RFFL-202ENST00000394597 SLC38A2Q96QD8 506 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 TIMM29Q9BSF4 260 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 CRB3Q9BUF7 120 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 KCNH6Q9H252 994 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 KCNK12Q9HB15 430 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 OR6C74A6NCV1 312 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 OR2AT4A6NND4 320 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 ZNF705EA8MWA4 302 aaPredicted RBP5.37□□□□□ -1.55
RFFL-202ENST00000394597 E9PI62 339 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 TLR4O00206 839 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 OIP5O43482 229 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 SLCO2B1O94956 709 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 SPDEFO95238 335 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 APBB3O95704 486 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 RD3LP0DJH9 198 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 ITGAMP11215 1152 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 CSNK2A2P19784 350 aaPredicted RBP5.37□□□□□ -1.55
RFFL-202ENST00000394597 NT5EP21589 574 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 ALAS2P22557 587 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 HTR2AP28223 471 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 TGM4P49221 684 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 ARRB1P49407 418 aaPredicted RBP5.37□□□□□ -1.55
RFFL-202ENST00000394597 MAP2K6P52564 334 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 ARHGDIBP52566 201 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 PER3P56645 1201 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 KIAA1024LP59773 190 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 BTN3A2P78410 334 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 BLOC1S1P78537 153 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 DPTQ07507 201 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 ZNF542PQ5EBM4 170 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 TMEM215Q68D42 235 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 LCTLQ6UWM7 567 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 USP51Q70EK9 711 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 KANSL1Q7Z3B3 1105 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 FUNDC1Q8IVP5 155 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 LINC00518Q8N0U6 118 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 KRTCAP2Q8N6L1 136 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 SAMD12Q8N8I0 201 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 C2CD4CQ8TF44 421 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 MRGPRX3Q96LB0 322 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 BRINP2Q9C0B6 783 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 FZD4Q9ULV1 537 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 PLEKHA6Q9Y2H5 1048 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 MGAMO43451 1857 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 IRGMA1A4Y4 181 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 TO15178 435 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 SLC43A1O75387 559 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 LALBAP00709 142 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 OPN1SWP03999 348 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 MTHFD2P13995 350 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 TYRP1P17643 537 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 NCBP2P52298 156 aaKnown RBP eCLIP5.37□□□□□ -1.55
RFFL-202ENST00000394597 RAB8AP61006 207 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 PITPNAQ00169 270 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 SNTB2Q13425 540 aaKnown RBP5.37□□□□□ -1.55
RFFL-202ENST00000394597 SMAD4Q13485 552 aaKnown RBP5.37□□□□□ -1.55
RFFL-202ENST00000394597 ASAH1Q13510 395 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 GANABQ14697 944 aaKnown RBP5.37□□□□□ -1.55
RFFL-202ENST00000394597 BAK1Q16611 211 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 IFI44LQ53G44 452 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 SLC35F1Q5T1Q4 408 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 LINGO2Q7L985 606 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 OR10Z1Q8NGY1 313 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 ZNF480Q8WV37 535 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 MAFIPQ8WZ33 124 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 PMM1Q92871 262 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 C10orf90Q96M02 699 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 FEVQ99581 238 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 SLC35A5Q9BS91 424 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 DPH7Q9BTV6 452 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 ZNF471Q9BX82 626 aaPredicted RBP5.37□□□□□ -1.55
RFFL-202ENST00000394597 ABCG4Q9H172 646 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 DUSP21Q9H596 190 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 UBE2ZQ9H832 354 aaPredicted RBP5.37□□□□□ -1.55
RFFL-202ENST00000394597 PELI2Q9HAT8 420 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 BRF2Q9HAW0 419 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 TRPV4Q9HBA0 871 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 TMEM184CQ9NVA4 438 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 SEC14L3Q9UDX4 400 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 APOBEC3BQ9UH17 382 aaKnown RBP5.37□□□□□ -1.55
RFFL-202ENST00000394597 PADI2Q9Y2J8 665 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 PCDHA9Q9Y5H5 950 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 KLK4Q9Y5K2 254 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 APC2O95996 2303 aa5.36□□□□□ -1.55
RFFL-202ENST00000394597 A0A075B6Q4 140 aa5.36□□□□□ -1.55
RFFL-202ENST00000394597 PCDH17O14917 1159 aa5.36□□□□□ -1.55
RFFL-202ENST00000394597 BET1O15155 118 aa5.36□□□□□ -1.55
RFFL-202ENST00000394597 SLC16A6O15403 523 aa5.36□□□□□ -1.55
RFFL-202ENST00000394597 SNAPC5O75971 98 aa5.36□□□□□ -1.55
RFFL-202ENST00000394597 TFP02787 698 aa5.36□□□□□ -1.55
RFFL-202ENST00000394597 HLA-DPB1P04440 258 aa5.36□□□□□ -1.55
RFFL-202ENST00000394597 CBR1P16152 277 aa5.36□□□□□ -1.55
RFFL-202ENST00000394597 FAUP35544 74 aaKnown RBP5.36□□□□□ -1.55
RFFL-202ENST00000394597 YPEL5P62699 121 aa5.36□□□□□ -1.55
RFFL-202ENST00000394597 NFATC4Q14934 902 aa5.36□□□□□ -1.55
RFFL-202ENST00000394597 LARS2Q15031 903 aaKnown RBP5.36□□□□□ -1.55
RFFL-202ENST00000394597 MLF2Q15773 248 aaPredicted RBP5.36□□□□□ -1.55
RFFL-202ENST00000394597 NLRP8Q86W28 1048 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms