RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 CNEP1R1Q8N9A8 125 aa15.76■□□□□ 0.11
SNRPA1-202ENST00000394082 MNS1Q8NEH6 495 aa15.76■□□□□ 0.11
SNRPA1-202ENST00000394082 ARSGQ96EG1 525 aa15.76■□□□□ 0.11
SNRPA1-202ENST00000394082 C1GALT1C1Q96EU7 318 aa15.76■□□□□ 0.11
SNRPA1-202ENST00000394082 ZNF845Q96IR2 970 aaPredicted RBP15.76■□□□□ 0.11
SNRPA1-202ENST00000394082 MARK4Q96L34 752 aa15.76■□□□□ 0.11
SNRPA1-202ENST00000394082 LMF2Q9BU23 707 aaKnown RBP15.76■□□□□ 0.11
SNRPA1-202ENST00000394082 MED18Q9BUE0 208 aa15.76■□□□□ 0.11
SNRPA1-202ENST00000394082 MYNNQ9NPC7 610 aa15.76■□□□□ 0.11
SNRPA1-202ENST00000394082 ZNF337Q9Y3M9 751 aa15.76■□□□□ 0.11
SNRPA1-202ENST00000394082 OR2M5A3KFT3 312 aa15.75■□□□□ 0.11
SNRPA1-202ENST00000394082 SCO2O43819 266 aa15.75■□□□□ 0.11
SNRPA1-202ENST00000394082 SMPD2O60906 423 aa15.75■□□□□ 0.11
SNRPA1-202ENST00000394082 POU2F1P14859 743 aa15.75■□□□□ 0.11
SNRPA1-202ENST00000394082 NCBP2P52298 156 aaKnown RBP eCLIP15.75■□□□□ 0.111e-6■□□□□ 10.4
SNRPA1-202ENST00000394082 SUCLG1P53597 346 aaKnown RBP15.75■□□□□ 0.11
SNRPA1-202ENST00000394082 RPS3AP61247 264 aaKnown RBP15.75■□□□□ 0.11
SNRPA1-202ENST00000394082 PRR5P85299 388 aa15.75■□□□□ 0.11
SNRPA1-202ENST00000394082 C17orf67Q0P5P2 114 aa15.75■□□□□ 0.11
SNRPA1-202ENST00000394082 C2orf80Q0P641 193 aa15.75■□□□□ 0.11
SNRPA1-202ENST00000394082 ZNHIT3Q15649 155 aaPredicted RBP15.75■□□□□ 0.11
SNRPA1-202ENST00000394082 ACKR1Q16570 336 aa15.75■□□□□ 0.11
SNRPA1-202ENST00000394082 TMEM44Q2T9K0 475 aa15.75■□□□□ 0.11
SNRPA1-202ENST00000394082 FAM219BQ5XKK7 198 aa15.75■□□□□ 0.11
SNRPA1-202ENST00000394082 CLEC9AQ6UXN8 241 aa15.75■□□□□ 0.11
SNRPA1-202ENST00000394082 C20orf204Q6ZNR8 217 aa15.75■□□□□ 0.11
SNRPA1-202ENST00000394082 TRMT10CQ7L0Y3 403 aaKnown RBP15.75■□□□□ 0.11
SNRPA1-202ENST00000394082 P3H2Q8IVL5 708 aa15.75■□□□□ 0.11
SNRPA1-202ENST00000394082 UBQLNLQ8IYU4 475 aa15.75■□□□□ 0.11
SNRPA1-202ENST00000394082 NOA1Q8NC60 698 aaKnown RBP15.75■□□□□ 0.11
SNRPA1-202ENST00000394082 FIG4Q92562 907 aa15.75■□□□□ 0.11
SNRPA1-202ENST00000394082 HOXB13Q92826 284 aaPredicted RBP15.75■□□□□ 0.11
SNRPA1-202ENST00000394082 GFM2Q969S9 779 aaKnown RBP15.75■□□□□ 0.11
SNRPA1-202ENST00000394082 ELP4Q96EB1 424 aa15.75■□□□□ 0.11
SNRPA1-202ENST00000394082 ZNF764Q96H86 408 aaPredicted RBP15.75■□□□□ 0.11
SNRPA1-202ENST00000394082 COX4I2Q96KJ9 171 aa15.75■□□□□ 0.11
SNRPA1-202ENST00000394082 FAM111AQ96PZ2 611 aa15.75■□□□□ 0.11
SNRPA1-202ENST00000394082 SMR3AQ99954 134 aa15.75■□□□□ 0.11
SNRPA1-202ENST00000394082 EBPLQ9BY08 206 aa15.75■□□□□ 0.11
SNRPA1-202ENST00000394082 GSTO2Q9H4Y5 243 aa15.75■□□□□ 0.11
SNRPA1-202ENST00000394082 C3orf14Q9HBI5 128 aa15.75■□□□□ 0.11
SNRPA1-202ENST00000394082 MIEF1Q9NQG6 463 aa15.75■□□□□ 0.11
SNRPA1-202ENST00000394082 DDX18Q9NVP1 670 aaKnown RBP15.75■□□□□ 0.11
SNRPA1-202ENST00000394082 C6orf203Q9P0P8 240 aaPredicted RBP15.75■□□□□ 0.11
SNRPA1-202ENST00000394082 STOML1Q9UBI4 398 aa15.75■□□□□ 0.11
SNRPA1-202ENST00000394082 DCDC2Q9UHG0 476 aa15.75■□□□□ 0.11
SNRPA1-202ENST00000394082 TIMM22Q9Y584 194 aa15.75■□□□□ 0.11
SNRPA1-202ENST00000394082 NPIPB8E9PQR5 432 aa15.74■□□□□ 0.11
SNRPA1-202ENST00000394082 JUNP05412 331 aaKnown RBP15.74■□□□□ 0.11
SNRPA1-202ENST00000394082 NTSP30990 170 aa15.74■□□□□ 0.11
SNRPA1-202ENST00000394082 CCKARP32238 428 aa15.74■□□□□ 0.11
SNRPA1-202ENST00000394082 SPDYAQ5MJ70 313 aa15.74■□□□□ 0.11
SNRPA1-202ENST00000394082 Q5PR19 223 aa15.74■□□□□ 0.11
SNRPA1-202ENST00000394082 TMEM107Q6UX40 140 aa15.74■□□□□ 0.11
SNRPA1-202ENST00000394082 FAM214BQ7L5A3 538 aa15.74■□□□□ 0.11
SNRPA1-202ENST00000394082 DUSP19Q8WTR2 217 aa15.74■□□□□ 0.11
SNRPA1-202ENST00000394082 AMDHD1Q96NU7 426 aa15.74■□□□□ 0.11
SNRPA1-202ENST00000394082 PINK1Q9BXM7 581 aa15.74■□□□□ 0.11
SNRPA1-202ENST00000394082 RTN4RQ9BZR6 473 aa15.74■□□□□ 0.11
SNRPA1-202ENST00000394082 GLIPR2Q9H4G4 154 aa15.74■□□□□ 0.11
SNRPA1-202ENST00000394082 PAQR5Q9NXK6 330 aaPredicted RBP15.74■□□□□ 0.11
SNRPA1-202ENST00000394082 KLHL28Q9NXS3 571 aa15.74■□□□□ 0.11
SNRPA1-202ENST00000394082 MED11Q9P086 117 aa15.74■□□□□ 0.11
SNRPA1-202ENST00000394082 DNHD1Q96M86 4753 aa15.73■□□□□ 0.11
SNRPA1-202ENST00000394082 ARID1AO14497 2285 aa15.73■□□□□ 0.11
SNRPA1-202ENST00000394082 C17orf51A8MQB3 221 aa15.73■□□□□ 0.11
SNRPA1-202ENST00000394082 TMCC2O75069 709 aa15.73■□□□□ 0.11
SNRPA1-202ENST00000394082 RSL1D1O76021 490 aaKnown RBP15.73■□□□□ 0.11
SNRPA1-202ENST00000394082 NGFRP08138 427 aa15.73■□□□□ 0.11
SNRPA1-202ENST00000394082 PPP3CBP16298 524 aa15.73■□□□□ 0.11
SNRPA1-202ENST00000394082 ZNF17P17021 662 aa15.73■□□□□ 0.11
SNRPA1-202ENST00000394082 IL11P20809 199 aa15.73■□□□□ 0.11
SNRPA1-202ENST00000394082 BTKQ06187 659 aa15.73■□□□□ 0.11
SNRPA1-202ENST00000394082 PON3Q15166 354 aa15.73■□□□□ 0.11
SNRPA1-202ENST00000394082 PRSS53Q2L4Q9 553 aa15.73■□□□□ 0.11
SNRPA1-202ENST00000394082 SH2D4BQ5SQS7 431 aa15.73■□□□□ 0.11
SNRPA1-202ENST00000394082 FNDC9Q8TBE3 224 aa15.73■□□□□ 0.11
SNRPA1-202ENST00000394082 KCNA7Q96RP8 456 aa15.73■□□□□ 0.11
SNRPA1-202ENST00000394082 BDH2Q9BUT1 245 aa15.73■□□□□ 0.11
SNRPA1-202ENST00000394082 OPN3Q9H1Y3 402 aaPredicted RBP15.73■□□□□ 0.11
SNRPA1-202ENST00000394082 ZNF395Q9H8N7 513 aaPredicted RBP15.73■□□□□ 0.11
SNRPA1-202ENST00000394082 MID1IP1Q9NPA3 183 aa15.73■□□□□ 0.11
SNRPA1-202ENST00000394082 PLSCR4Q9NRQ2 329 aa15.73■□□□□ 0.11
SNRPA1-202ENST00000394082 A0A087WZY1 265 aa15.72■□□□□ 0.11
SNRPA1-202ENST00000394082 C7orf72A4D263 438 aa15.72■□□□□ 0.11
SNRPA1-202ENST00000394082 H0YC42 278 aa15.72■□□□□ 0.11
SNRPA1-202ENST00000394082 UBFD1O14562 309 aaKnown RBP15.72■□□□□ 0.11
SNRPA1-202ENST00000394082 RIPK2O43353 540 aa15.72■□□□□ 0.11
SNRPA1-202ENST00000394082 KCNH1O95259 989 aa15.72■□□□□ 0.11
SNRPA1-202ENST00000394082 PAX1P15863 534 aa15.72■□□□□ 0.11
SNRPA1-202ENST00000394082 TBXA2RP21731 343 aa15.72■□□□□ 0.11
SNRPA1-202ENST00000394082 TCEA1P23193 301 aaKnown RBP15.72■□□□□ 0.11
SNRPA1-202ENST00000394082 PRPH2P23942 346 aa15.72■□□□□ 0.11
SNRPA1-202ENST00000394082 LOXP28300 417 aaPredicted RBP15.72■□□□□ 0.11
SNRPA1-202ENST00000394082 MAP3K8P41279 467 aa15.72■□□□□ 0.11
SNRPA1-202ENST00000394082 FOXA1P55317 472 aa15.72■□□□□ 0.11
SNRPA1-202ENST00000394082 TPD52P55327 224 aaPredicted RBP15.72■□□□□ 0.11
SNRPA1-202ENST00000394082 CLDN20P56880 219 aa15.72■□□□□ 0.11
SNRPA1-202ENST00000394082 IMPG1Q17R60 797 aa15.72■□□□□ 0.11
SNRPA1-202ENST00000394082 NOXRED1Q6NXP6 359 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms