RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 E9PBE3 544 aa6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 KLF11O14901 512 aa6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 SUSD5O60279 629 aa6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 FADS1O60427 444 aa6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 SCN2BO60939 215 aa6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 KCNH1O95259 989 aa6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 UTS2O95399 124 aa6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 IFI6P09912 130 aa6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 ALOX5P09917 674 aa6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 GP1BBP13224 206 aa6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 DDX5P17844 614 aaKnown RBP6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 CDKN2CP42773 168 aa6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 KIR3DL1P43629 444 aa6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 NUP107P57740 925 aa6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 PRR5P85299 388 aa6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 PMPCAQ10713 525 aa6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 LSM12Q3MHD2 195 aaKnown RBP6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 CYP27C1Q4G0S4 372 aa6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 EXOSC6Q5RKV6 272 aaKnown RBP6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 RTL6Q6ICC9 239 aa6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 OGFOD2Q6N063 350 aa6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 TMEM81Q6P7N7 255 aa6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 PLXDC2Q6UX71 529 aa6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 DNAJC14Q6Y2X3 702 aaPredicted RBP6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 CAMKMTQ7Z624 323 aa6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 LSRQ86X29 649 aaPredicted RBP6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 PLCZ1Q86YW0 608 aa6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 CCDC71Q8IV32 467 aaPredicted RBP6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 KIRREL3Q8IZU9 778 aa6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 COX18Q8N8Q8 333 aa6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 OR9I1Q8NGQ6 314 aa6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 OR14L1PQ8NHC6 308 aa6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 CEP70Q8NHQ1 597 aa6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 PSMA8Q8TAA3 256 aa6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 MAELQ96JY0 434 aaKnown RBP6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 KLHDC3Q9BQ90 382 aa6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 INPP5KQ9BT40 448 aa6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 UGT2B28Q9BY64 529 aa6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 TP63Q9H3D4 680 aaPredicted RBP6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 DSN1Q9H410 356 aa6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 ACKR4Q9NPB9 350 aa6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 INTS9Q9NV88 658 aaKnown RBP6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 MED11Q9P086 117 aa6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 PPP4R1LQ9P1A2 415 aa6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 DKKL1Q9UK85 242 aa6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 GPR45Q9Y5Y3 372 aa6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 USH1CQ9Y6N9 552 aa6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 ESPL1Q14674 2120 aa6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 PTPN13Q12923 2485 aa6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 NCKAP5O14513 1909 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 EXPH5Q8NEV8 1989 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 UQCRHLA0A096LP55 91 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 OR14I1A6ND48 311 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 FAM90A27PA6NNH2 459 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 PRSS44E7EML9 344 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 E9PLN8 166 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 C19orf84I3L1E1 186 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 RNASET2O00584 256 aaKnown RBP6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 BCKDKO14874 412 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 HCN1O60741 890 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 OXSR1O95747 527 aaPredicted RBP6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 ANGPTL1O95841 491 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 GSNP06396 782 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 GLI4P10075 376 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 CD1EP15812 388 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 BMP7P18075 431 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 ELAVL4P26378 380 aaKnown RBP6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 ACVR2AP27037 513 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 S100A3P33764 101 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 ADH7P40394 386 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 ZFP36L2P47974 494 aaKnown RBP6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 PRIM2P49643 509 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 STARP49675 285 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 IDH3AP50213 366 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 POU6F2P78424 691 aaPredicted RBP6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 CRYZQ08257 329 aaKnown RBP6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 SNTA1Q13424 505 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 NDUFAF6Q330K2 333 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 VPS26BQ4G0F5 336 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 DCST2Q5T1A1 773 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 WLSQ5T9L3 541 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 CDC73Q6P1J9 531 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 TNFAIP8L2Q6P589 184 aaPredicted RBP6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 EPGNQ6UW88 154 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 RPTNQ6XPR3 784 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 C6orf120Q7Z4R8 191 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 SPATA19Q7Z5L4 167 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 HMGN2P46Q86SG4 172 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 ULK2Q8IYT8 1036 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 ZNF808Q8N4W9 903 aaPredicted RBP6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 OR2M3Q8NG83 312 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 OR4K17Q8NGC6 315 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 OR8J2Q8NGG1 315 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 OR56A1Q8NGH5 318 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 OR4C3Q8NH37 302 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 FAM110BQ8TC76 370 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 PNPT1Q8TCS8 783 aaKnown RBP6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 SFXN5Q8TD22 340 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 ACTRT2Q8TDY3 377 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 ADAMTS15Q8TE58 950 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms