RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 GMPPBQ9Y5P6 360 aa13.91□□□□□ -0.18
MKS1-202ENST00000393119 CCNB2O95067 398 aa13.9□□□□□ -0.18
MKS1-202ENST00000393119 EEF1B2P24534 225 aaKnown RBP13.9□□□□□ -0.18
MKS1-202ENST00000393119 POU1F1P28069 291 aa13.9□□□□□ -0.18
MKS1-202ENST00000393119 GPR3P46089 330 aa13.9□□□□□ -0.18
MKS1-202ENST00000393119 PLAURQ03405 335 aa13.9□□□□□ -0.18
MKS1-202ENST00000393119 CDK5R2Q13319 367 aa13.9□□□□□ -0.18
MKS1-202ENST00000393119 TCTE1Q5JU00 501 aa13.9□□□□□ -0.18
MKS1-202ENST00000393119 C6orf141Q5SZD1 244 aa13.9□□□□□ -0.18
MKS1-202ENST00000393119 DESI1Q6ICB0 168 aa13.9□□□□□ -0.18
MKS1-202ENST00000393119 PODNL1Q6PEZ8 512 aa13.9□□□□□ -0.18
MKS1-202ENST00000393119 NPSR1Q6W5P4 371 aa13.9□□□□□ -0.18
MKS1-202ENST00000393119 ZNF836Q6ZNA1 936 aa13.9□□□□□ -0.18
MKS1-202ENST00000393119 C11orf74Q86VG3 221 aa13.9□□□□□ -0.18
MKS1-202ENST00000393119 SAMD14Q8IZD0 417 aaPredicted RBP13.9□□□□□ -0.18
MKS1-202ENST00000393119 POP5Q969H6 163 aaKnown RBP13.9□□□□□ -0.18
MKS1-202ENST00000393119 NRBF2Q96F24 287 aa13.9□□□□□ -0.18
MKS1-202ENST00000393119 IER2Q9BTL4 223 aa13.9□□□□□ -0.18
MKS1-202ENST00000393119 PIGUQ9H490 435 aa13.9□□□□□ -0.18
MKS1-202ENST00000393119 APMAPQ9HDC9 416 aa13.9□□□□□ -0.18
MKS1-202ENST00000393119 SEMA4GQ9NTN9 838 aa13.9□□□□□ -0.18
MKS1-202ENST00000393119 PCDHGA6Q9Y5G7 932 aa13.9□□□□□ -0.18
MKS1-202ENST00000393119 MN1Q10571 1320 aaPredicted RBP13.9□□□□□ -0.18
MKS1-202ENST00000393119 ASNA1O43681 348 aa13.9□□□□□ -0.18
MKS1-202ENST00000393119 HTR1AP08908 422 aa13.9□□□□□ -0.18
MKS1-202ENST00000393119 ALOX5P09917 674 aa13.9□□□□□ -0.18
MKS1-202ENST00000393119 HMGA2P52926 109 aa13.9□□□□□ -0.18
MKS1-202ENST00000393119 GPLD1P80108 840 aa13.9□□□□□ -0.18
MKS1-202ENST00000393119 NR0B2Q15466 257 aa13.9□□□□□ -0.18
MKS1-202ENST00000393119 ARHGAP11BQ3KRB8 267 aa13.9□□□□□ -0.18
MKS1-202ENST00000393119 COLEC12Q5KU26 742 aa13.9□□□□□ -0.18
MKS1-202ENST00000393119 GPR107Q5VW38 600 aa13.9□□□□□ -0.18
MKS1-202ENST00000393119 OR6C4Q8NGE1 309 aa13.9□□□□□ -0.18
MKS1-202ENST00000393119 OR13F1Q8NGS4 319 aa13.9□□□□□ -0.18
MKS1-202ENST00000393119 DPYSL5Q9BPU6 564 aa13.9□□□□□ -0.18
MKS1-202ENST00000393119 CTSFQ9UBX1 484 aa13.9□□□□□ -0.18
MKS1-202ENST00000393119 NDRG4Q9ULP0 352 aaKnown RBP13.9□□□□□ -0.18
MKS1-202ENST00000393119 ASPMQ8IZT6 3477 aa13.9□□□□□ -0.18
MKS1-202ENST00000393119 OR10H3O60404 316 aa13.89□□□□□ -0.19
MKS1-202ENST00000393119 MAN1A2O60476 641 aa13.89□□□□□ -0.19
MKS1-202ENST00000393119 DPM1O60762 260 aa13.89□□□□□ -0.19
MKS1-202ENST00000393119 H1F0P07305 194 aaKnown RBP13.89□□□□□ -0.19
MKS1-202ENST00000393119 ITGAMP11215 1152 aa13.89□□□□□ -0.19
MKS1-202ENST00000393119 JUNBP17275 347 aaPredicted RBP13.89□□□□□ -0.19
MKS1-202ENST00000393119 TNNI3P19429 210 aa13.89□□□□□ -0.19
MKS1-202ENST00000393119 CBLP22681 906 aa13.89□□□□□ -0.19
MKS1-202ENST00000393119 CRHBPP24387 322 aa13.89□□□□□ -0.19
MKS1-202ENST00000393119 MAP3K8P41279 467 aa13.89□□□□□ -0.19
MKS1-202ENST00000393119 NR1D2Q14995 579 aa13.89□□□□□ -0.19
MKS1-202ENST00000393119 SLC15A4Q8N697 577 aa13.89□□□□□ -0.19
MKS1-202ENST00000393119 ZNF614Q8N883 585 aa13.89□□□□□ -0.19
MKS1-202ENST00000393119 SCAIQ8N9R8 606 aa13.89□□□□□ -0.19
MKS1-202ENST00000393119 RDH12Q96NR8 316 aa13.89□□□□□ -0.19
MKS1-202ENST00000393119 DGAT2Q96PD7 388 aa13.89□□□□□ -0.19
MKS1-202ENST00000393119 CD180Q99467 661 aa13.89□□□□□ -0.19
MKS1-202ENST00000393119 CTRCQ99895 268 aa13.89□□□□□ -0.19
MKS1-202ENST00000393119 AKIRIN1Q9H9L7 192 aaPredicted RBP13.89□□□□□ -0.19
MKS1-202ENST00000393119 FOLH1BQ9HBA9 442 aa13.89□□□□□ -0.19
MKS1-202ENST00000393119 ZNF443Q9Y2A4 671 aaPredicted RBP13.89□□□□□ -0.19
MKS1-202ENST00000393119 ASCC3Q8N3C0 2202 aaKnown RBP13.89□□□□□ -0.19
MKS1-202ENST00000393119 TNRC6BQ9UPQ9 1833 aaKnown RBP13.89□□□□□ -0.19
MKS1-202ENST00000393119 A0A087WV62 115 aa13.89□□□□□ -0.19
MKS1-202ENST00000393119 IGHV5-10-1A0A0J9YXX1 117 aa13.89□□□□□ -0.19
MKS1-202ENST00000393119 ADAM11O75078 769 aa13.89□□□□□ -0.19
MKS1-202ENST00000393119 UGT2B17O75795 530 aa13.89□□□□□ -0.19
MKS1-202ENST00000393119 GSTT2P0CG29 244 aa13.89□□□□□ -0.19
MKS1-202ENST00000393119 GSTT2BP0CG30 244 aa13.89□□□□□ -0.19
MKS1-202ENST00000393119 IDH2P48735 452 aaKnown RBP13.89□□□□□ -0.19
MKS1-202ENST00000393119 MLLT10P55197 1068 aa13.89□□□□□ -0.19
MKS1-202ENST00000393119 DBPQ10586 325 aaPredicted RBP13.89□□□□□ -0.19
MKS1-202ENST00000393119 OXA1LQ15070 435 aa13.89□□□□□ -0.19
MKS1-202ENST00000393119 NEDD8Q15843 81 aa13.89□□□□□ -0.19
MKS1-202ENST00000393119 EXOSC6Q5RKV6 272 aaKnown RBP13.89□□□□□ -0.19
MKS1-202ENST00000393119 WDR74Q6RFH5 385 aaPredicted RBP13.89□□□□□ -0.19
MKS1-202ENST00000393119 B3GNT8Q7Z7M8 397 aa13.89□□□□□ -0.19
MKS1-202ENST00000393119 NKAIN4Q8IVV8 208 aa13.89□□□□□ -0.19
MKS1-202ENST00000393119 ZNF595Q8IYB9 648 aa13.89□□□□□ -0.19
MKS1-202ENST00000393119 ZNF675Q8TD23 568 aa13.89□□□□□ -0.19
MKS1-202ENST00000393119 APH1BQ8WW43 257 aa13.89□□□□□ -0.19
MKS1-202ENST00000393119 OR6C1Q96RD1 312 aa13.89□□□□□ -0.19
MKS1-202ENST00000393119 YTHDF1Q9BYJ9 559 aaKnown RBP13.89□□□□□ -0.19
MKS1-202ENST00000393119 SLC22A11Q9NSA0 550 aa13.89□□□□□ -0.19
MKS1-202ENST00000393119 LIPT1Q9Y234 373 aa13.89□□□□□ -0.19
MKS1-202ENST00000393119 HCN4Q9Y3Q4 1203 aa13.89□□□□□ -0.19
MKS1-202ENST00000393119 IGHV3-20A0A0C4DH32 117 aa13.88□□□□□ -0.19
MKS1-202ENST00000393119 DUXAA6NLW8 204 aa13.88□□□□□ -0.19
MKS1-202ENST00000393119 J3QRK9 145 aa13.88□□□□□ -0.19
MKS1-202ENST00000393119 KCNK2O95069 426 aa13.88□□□□□ -0.19
MKS1-202ENST00000393119 CLPSP04118 112 aa13.88□□□□□ -0.19
MKS1-202ENST00000393119 HOXB6P17509 224 aaKnown RBP13.88□□□□□ -0.19
MKS1-202ENST00000393119 ANXA11P50995 505 aaKnown RBP13.88□□□□□ -0.19
MKS1-202ENST00000393119 MAPK10P53779 464 aa13.88□□□□□ -0.19
MKS1-202ENST00000393119 TMBIM6P55061 237 aa13.88□□□□□ -0.19
MKS1-202ENST00000393119 MAP4K2Q12851 820 aa13.88□□□□□ -0.19
MKS1-202ENST00000393119 NDUFAF6Q330K2 333 aa13.88□□□□□ -0.19
MKS1-202ENST00000393119 INAVAQ3KP66 663 aa13.88□□□□□ -0.19
MKS1-202ENST00000393119 GARNL3Q5VVW2 1013 aa13.88□□□□□ -0.19
MKS1-202ENST00000393119 TMEM71Q6P5X7 295 aa13.88□□□□□ -0.19
MKS1-202ENST00000393119 ENTHD1Q8IYW4 607 aa13.88□□□□□ -0.19
MKS1-202ENST00000393119 CACTIN-AS1Q8N1I8 211 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms