RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 MASP2O00187 686 aa12.18□□□□□ -0.46
USP44-202ENST00000393091 AIM2O14862 343 aa12.18□□□□□ -0.46
USP44-202ENST00000393091 ATXN7O15265 892 aaPredicted RBP12.18□□□□□ -0.46
USP44-202ENST00000393091 CHRM4P08173 479 aa12.18□□□□□ -0.46
USP44-202ENST00000393091 CCL11P51671 97 aa12.18□□□□□ -0.46
USP44-202ENST00000393091 CRISP3P54108 245 aa12.18□□□□□ -0.46
USP44-202ENST00000393091 SUMO3P55854 103 aaPredicted RBP12.18□□□□□ -0.46
USP44-202ENST00000393091 SF3A3Q12874 501 aaKnown RBP eCLIP12.18□□□□□ -0.46
USP44-202ENST00000393091 GRAMD1BQ3KR37 738 aa12.18□□□□□ -0.46
USP44-202ENST00000393091 GLYR1Q49A26 553 aaPredicted RBP12.18□□□□□ -0.46
USP44-202ENST00000393091 CLEC4FQ8N1N0 589 aa12.18□□□□□ -0.46
USP44-202ENST00000393091 RBMXL3Q8N7X1 1067 aaKnown RBP12.18□□□□□ -0.46
USP44-202ENST00000393091 FBXO27Q8NI29 283 aa12.18□□□□□ -0.46
USP44-202ENST00000393091 GPR151Q8TDV0 419 aa12.18□□□□□ -0.46
USP44-202ENST00000393091 AURKBQ96GD4 344 aaPredicted RBP12.18□□□□□ -0.46
USP44-202ENST00000393091 FREM2Q5SZK8 3169 aa12.18□□□□□ -0.46
USP44-202ENST00000393091 C7orf72A4D263 438 aa12.17□□□□□ -0.46
USP44-202ENST00000393091 HOXB6P17509 224 aaKnown RBP12.17□□□□□ -0.46
USP44-202ENST00000393091 PRKAR1BP31321 381 aa12.17□□□□□ -0.46
USP44-202ENST00000393091 TRAP1Q12931 704 aaKnown RBP12.17□□□□□ -0.46
USP44-202ENST00000393091 BNIP2Q12982 314 aa12.17□□□□□ -0.46
USP44-202ENST00000393091 OR4N2Q8NGD1 307 aa12.17□□□□□ -0.46
USP44-202ENST00000393091 OR5D16Q8NGK9 328 aa12.17□□□□□ -0.46
USP44-202ENST00000393091 DTNBP1Q96EV8 351 aa12.17□□□□□ -0.46
USP44-202ENST00000393091 RUBCNLQ9H714 662 aa12.17□□□□□ -0.46
USP44-202ENST00000393091 TIMMDC1Q9NPL8 285 aa12.17□□□□□ -0.46
USP44-202ENST00000393091 SACM1LQ9NTJ5 587 aa12.17□□□□□ -0.46
USP44-202ENST00000393091 UGT2B11O75310 529 aa12.17□□□□□ -0.46
USP44-202ENST00000393091 SP1P08047 785 aa12.17□□□□□ -0.46
USP44-202ENST00000393091 MSX1P28360 303 aa12.17□□□□□ -0.46
USP44-202ENST00000393091 CAPRIN1Q14444 709 aaKnown RBP12.17□□□□□ -0.46
USP44-202ENST00000393091 MTX3Q5HYI7 312 aa12.17□□□□□ -0.46
USP44-202ENST00000393091 ZNF468Q5VIY5 522 aaPredicted RBP12.17□□□□□ -0.46
USP44-202ENST00000393091 PATL1Q86TB9 770 aaKnown RBP12.17□□□□□ -0.46
USP44-202ENST00000393091 MICU2Q8IYU8 434 aa12.17□□□□□ -0.46
USP44-202ENST00000393091 ZADH2Q8N4Q0 377 aa12.17□□□□□ -0.46
USP44-202ENST00000393091 SIRT6Q8N6T7 355 aa12.17□□□□□ -0.46
USP44-202ENST00000393091 EXD3Q8N9H8 876 aa12.17□□□□□ -0.46
USP44-202ENST00000393091 PIK3R3Q92569 461 aa12.17□□□□□ -0.46
USP44-202ENST00000393091 PNPLA2Q96AD5 504 aa12.17□□□□□ -0.46
USP44-202ENST00000393091 DTNAQ9Y4J8 743 aa12.17□□□□□ -0.46
USP44-202ENST00000393091 KMT2BQ9UMN6 2715 aaPredicted RBP12.17□□□□□ -0.46
USP44-202ENST00000393091 TRAV17A0A0B4J275 112 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 B2RBV5 119 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 WWP2O00308 870 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 SYT5O00445 386 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 PDE9AO76083 593 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 SORBS2O94875 1100 aaKnown RBP12.16□□□□□ -0.46
USP44-202ENST00000393091 UTS2O95399 124 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 DBIP07108 87 aaKnown RBP12.16□□□□□ -0.46
USP44-202ENST00000393091 GGT1P19440 569 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 CASP3P42574 277 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 MTPNP58546 118 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 EEF1A1P68104 462 aaKnown RBP12.16□□□□□ -0.46
USP44-202ENST00000393091 CDK6Q00534 326 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 COL28A1Q2UY09 1125 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 RABL3Q5HYI8 236 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 INTS11Q5TA45 600 aaKnown RBP12.16□□□□□ -0.46
USP44-202ENST00000393091 AMER2Q8N7J2 671 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 ZNF527Q8NB42 609 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 C9orf43Q8TAL5 461 aaPredicted RBP12.16□□□□□ -0.46
USP44-202ENST00000393091 POLR2J2Q9GZM3 115 aaKnown RBP12.16□□□□□ -0.46
USP44-202ENST00000393091 POLR2J3Q9H1A7 115 aaKnown RBP12.16□□□□□ -0.46
USP44-202ENST00000393091 KCNE5Q9UJ90 142 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 KLF13Q9Y2Y9 288 aaPredicted RBP12.16□□□□□ -0.46
USP44-202ENST00000393091 TMEM229AB2RXF0 380 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 EBAG9O00559 213 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 EIF4E2O60573 245 aaKnown RBP12.16□□□□□ -0.46
USP44-202ENST00000393091 UGT2B17O75795 530 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 PDGFAP04085 211 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 EVI2BP34910 448 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 CRATP43155 626 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 PRKAG1P54619 331 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 SLC25A53Q5H9E4 307 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 ANKFN1Q8N957 763 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 ZFP62Q8NB50 900 aaPredicted RBP12.16□□□□□ -0.46
USP44-202ENST00000393091 RASSF5Q8WWW0 418 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 SLC9A6Q92581 669 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 TMEM19Q96HH6 336 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 TREX2Q9BQ50 279 aaPredicted RBP12.16□□□□□ -0.46
USP44-202ENST00000393091 ALG2Q9H553 416 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 HPF1Q9NWY4 346 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 ANGPT4Q9Y264 503 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 SLC35A3Q9Y2D2 325 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 FRYQ5TBA9 3013 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 SNPHO15079 494 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 FZD7O75084 574 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 H6PDO95479 791 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 OXSR1O95747 527 aaPredicted RBP12.16□□□□□ -0.46
USP44-202ENST00000393091 GSK3BP49841 420 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 CRYBA2P53672 197 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 LIPEQ05469 1076 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 FOXO1Q12778 655 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 SCARB2Q14108 478 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 OR1C1Q15619 314 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 TMEM44Q2T9K0 475 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 SLC22A10Q63ZE4 541 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 SLC25A25Q6KCM7 469 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 ABHD17AQ96GS6 310 aa12.16□□□□□ -0.46
USP44-202ENST00000393091 GAL3ST4Q96RP7 486 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms