RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 LARP4Q71RC2 724 aaKnown RBP eCLIP14.02□□□□□ -0.17
CCDC50-201ENST00000392455 SLC46A3Q7Z3Q1 461 aa14.02□□□□□ -0.17
CCDC50-201ENST00000392455 OR5AK2Q8NH90 309 aa14.02□□□□□ -0.17
CCDC50-201ENST00000392455 ANKRD30BLA7E2S9 258 aa14.02□□□□□ -0.17
CCDC50-201ENST00000392455 IMPA2O14732 288 aa14.02□□□□□ -0.17
CCDC50-201ENST00000392455 MSTNO14793 375 aa14.02□□□□□ -0.17
CCDC50-201ENST00000392455 FAM163BP0C2L3 166 aa14.02□□□□□ -0.17
CCDC50-201ENST00000392455 SLX4IPQ5VYV7 408 aa14.02□□□□□ -0.17
CCDC50-201ENST00000392455 ZNF585AQ6P3V2 769 aa14.02□□□□□ -0.17
CCDC50-201ENST00000392455 ZNF783Q6ZMS7 281 aa14.02□□□□□ -0.17
CCDC50-201ENST00000392455 MCHR1Q99705 422 aa14.02□□□□□ -0.17
CCDC50-201ENST00000392455 NMNAT2Q9BZQ4 307 aa14.02□□□□□ -0.17
CCDC50-201ENST00000392455 MVB12BQ9H7P6 319 aa14.02□□□□□ -0.17
CCDC50-201ENST00000392455 CHRNA9Q9UGM1 479 aa14.02□□□□□ -0.17
CCDC50-201ENST00000392455 B4DXG7 233 aa14.02□□□□□ -0.17
CCDC50-201ENST00000392455 GAPDHSO14556 408 aaPredicted RBP14.02□□□□□ -0.17
CCDC50-201ENST00000392455 GPR39O43194 453 aa14.02□□□□□ -0.17
CCDC50-201ENST00000392455 KCNK5O95279 499 aa14.02□□□□□ -0.17
CCDC50-201ENST00000392455 ADH7P40394 386 aa14.02□□□□□ -0.17
CCDC50-201ENST00000392455 EFNA3P52797 238 aa14.02□□□□□ -0.17
CCDC50-201ENST00000392455 CATR1Q13166 79 aa14.02□□□□□ -0.17
CCDC50-201ENST00000392455 RNF111Q6ZNA4 994 aa14.02□□□□□ -0.17
CCDC50-201ENST00000392455 CELF5Q8N6W0 485 aaKnown RBP14.02□□□□□ -0.17
CCDC50-201ENST00000392455 OR10T2Q8NGX3 314 aa14.02□□□□□ -0.17
CCDC50-201ENST00000392455 ARSGQ96EG1 525 aa14.02□□□□□ -0.17
CCDC50-201ENST00000392455 TRIB1Q96RU8 372 aa14.02□□□□□ -0.17
CCDC50-201ENST00000392455 LIN7CQ9NUP9 197 aaKnown RBP14.02□□□□□ -0.17
CCDC50-201ENST00000392455 PEAK1Q9H792 1746 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 GLTPD2A6NH11 291 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 NUDT19A8MXV4 375 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 RNF225M0QZC1 329 aaPredicted RBP14.01□□□□□ -0.17
CCDC50-201ENST00000392455 ZNF207O43670 478 aaKnown RBP14.01□□□□□ -0.17
CCDC50-201ENST00000392455 DLX5P56178 289 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 RAP2BP61225 183 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 SEC22CQ9BRL7 303 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 DEFB126Q9BYW3 111 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 TP63Q9H3D4 680 aaPredicted RBP14.01□□□□□ -0.17
CCDC50-201ENST00000392455 GPR83Q9NYM4 423 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 TMX2-CTNND1H3BSU7 103 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 MTX2O75431 263 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 HLA-EP13747 358 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 DRD2P14416 443 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 BMI1P35226 326 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 GSK3AP49840 483 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 IL13RA1P78552 427 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 CRMP1Q14194 572 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 GRB7Q14451 532 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 SF3A2Q15428 464 aaKnown RBP14.01□□□□□ -0.17
CCDC50-201ENST00000392455 UBE2UQ5VVX9 321 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 CEPT1Q9Y6K0 416 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 MYO7AQ13402 2215 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 CD97P48960 835 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 CLCNKAP51800 687 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 MFGE8Q08431 387 aaPredicted RBP14.01□□□□□ -0.17
CCDC50-201ENST00000392455 MBLAC2Q68D91 279 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 LRFN4Q6PJG9 635 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 TSSK4Q6SA08 328 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 SGTBQ96EQ0 304 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 EMC8O43402 210 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 SGCEO43556 437 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 DFFBO76075 338 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 RAB3AP20336 220 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 MEP1BQ16820 701 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 OR6Q1Q8NGQ2 317 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 DDX1Q92499 740 aaKnown RBP14.01□□□□□ -0.17
CCDC50-201ENST00000392455 C11orf49Q9H6J7 331 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 C1orf123Q9NWV4 160 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 MROH6A6NGR9 719 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 HAS3O00219 553 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 MAGEB4O15481 346 aaPredicted RBP14.01□□□□□ -0.17
CCDC50-201ENST00000392455 DUX1O43812 170 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 RETP07949 1114 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 ARSFP54793 590 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 RNF130Q86XS8 419 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 VWA5B2Q8N398 1253 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 SAP130Q9H0E3 1048 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 ACTR10Q9NZ32 417 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 RASD1Q9Y272 281 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 SYT7O43581 403 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 F2RP25116 425 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 ZNF33BQ06732 778 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 AAK1Q2M2I8 961 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 MRPL21Q7Z2W9 205 aaKnown RBP14.01□□□□□ -0.17
CCDC50-201ENST00000392455 ELP4Q96EB1 424 aa14.01□□□□□ -0.17
CCDC50-201ENST00000392455 UPK3BL1B0FP48 263 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 UPK3BL2E5RIL1 263 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 NRP1O14786 923 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 FMO6PO60774 539 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 CYP27C1Q4G0S4 372 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 ACSM3Q53FZ2 586 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 HEPHL1Q6MZM0 1159 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 LRRC25Q8N386 305 aaPredicted RBP14□□□□□ -0.17
CCDC50-201ENST00000392455 CLEC4DQ8WXI8 215 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 ANKRD9Q96BM1 317 aaPredicted RBP14□□□□□ -0.17
CCDC50-201ENST00000392455 APOBEC3GQ9HC16 384 aaKnown RBP14□□□□□ -0.17
CCDC50-201ENST00000392455 PRTFDC1Q9NRG1 225 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 CD300AQ9UGN4 299 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 PLAGL1Q9UM63 463 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 SPO11Q9Y5K1 396 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 DTYMKP23919 212 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms