RNA–Protein interactions for RNA: ENST00000390879.1

SNORA48.1-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 135 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.1-201ENST00000390879 COQ2Q96H96 371 aa1.61□□□□□ -2.15
SNORA48.1-201ENST00000390879 PIWIL1Q96J94 861 aaKnown RBP1.61□□□□□ -2.15
SNORA48.1-201ENST00000390879 CFAP53Q96M91 514 aa1.61□□□□□ -2.15
SNORA48.1-201ENST00000390879 C12orf66Q96MD2 445 aa1.61□□□□□ -2.15
SNORA48.1-201ENST00000390879 PRICKLE1Q96MT3 831 aaPredicted RBP1.61□□□□□ -2.15
SNORA48.1-201ENST00000390879 TGM7Q96PF1 710 aa1.61□□□□□ -2.15
SNORA48.1-201ENST00000390879 RBM14Q96PK6 669 aaKnown RBP1.61□□□□□ -2.15
SNORA48.1-201ENST00000390879 SLC38A2Q96QD8 506 aa1.61□□□□□ -2.15
SNORA48.1-201ENST00000390879 CHRDL1Q9BU40 450 aa1.61□□□□□ -2.15
SNORA48.1-201ENST00000390879 RBM4Q9BWF3 364 aaKnown RBP1.61□□□□□ -2.15
SNORA48.1-201ENST00000390879 CLEC7AQ9BXN2 247 aa1.61□□□□□ -2.15
SNORA48.1-201ENST00000390879 COMMD4Q9H0A8 199 aa1.61□□□□□ -2.15
SNORA48.1-201ENST00000390879 TMPRSS5Q9H3S3 457 aa1.61□□□□□ -2.15
SNORA48.1-201ENST00000390879 IKZF5Q9H5V7 419 aa1.61□□□□□ -2.15
SNORA48.1-201ENST00000390879 MTHFD2LQ9H903 347 aaPredicted RBP1.61□□□□□ -2.15
SNORA48.1-201ENST00000390879 RPRD1BQ9NQG5 326 aaKnown RBP1.61□□□□□ -2.15
SNORA48.1-201ENST00000390879 ZDHHC18Q9NUE0 388 aa1.61□□□□□ -2.15
SNORA48.1-201ENST00000390879 SMOXQ9NWM0 555 aa1.61□□□□□ -2.15
SNORA48.1-201ENST00000390879 SPATA7Q9P0W8 599 aa1.61□□□□□ -2.15
SNORA48.1-201ENST00000390879 PCSK1NQ9UHG2 260 aa1.61□□□□□ -2.15
SNORA48.1-201ENST00000390879 ADAM28Q9UKQ2 775 aa1.61□□□□□ -2.15
SNORA48.1-201ENST00000390879 MRPS28Q9Y2Q9 187 aaKnown RBP1.61□□□□□ -2.15
SNORA48.1-201ENST00000390879 EXOSC1Q9Y3B2 195 aaKnown RBP1.61□□□□□ -2.15
SNORA48.1-201ENST00000390879 MRPS18CQ9Y3D5 142 aaKnown RBP1.61□□□□□ -2.15
SNORA48.1-201ENST00000390879 ALG6Q9Y672 507 aa1.61□□□□□ -2.15
SNORA48.1-201ENST00000390879 SYNJ2O15056 1496 aa1.61□□□□□ -2.15
SNORA48.1-201ENST00000390879 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 ARHGEF17Q96PE2 2063 aaPredicted RBP1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 IGHV3-20A0A0C4DH32 117 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 TRBV5-4A0A0C4DH59 114 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 A0A0U1RQS6 177 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 TEX48A0A1B0GUV7 120 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 IQCMA0A1B0GVH7 501 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 FAM240BA0A1B0GVZ2 78 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 FAM172BPA6NC97 362 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 ACOD1A6NK06 481 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 HHLA1C9JL84 531 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 BLOC1S5-TXNDC5H3BN57 136 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 K7EQD1 137 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 WRBO00258 174 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 FCN1O00602 326 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 OR7A17O14581 309 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 LSM1O15116 133 aaKnown RBP1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 NBR2O15453 112 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 LRRTM2O43300 516 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 DFNA5O60443 496 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 DUS4LO95620 317 aaKnown RBP1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 JCHAINP01591 159 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 OPN1LWP04000 364 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 CAPN1P07384 714 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 SP1P08047 785 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 HSMCR30P0CW71 290 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 SNHG28P0DPA3 235 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 POU2F1P14859 743 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 MYOGP15173 224 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 FOSL2P15408 326 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 ZNF10P21506 573 aaPredicted RBP1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 ATP5A1P25705 553 aaKnown RBP1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 RPL4P36578 427 aaKnown RBP1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 FDFT1P37268 417 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 CAPGP40121 348 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 SLC1A4P43007 532 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 SYKP43405 635 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 GNPDA1P46926 289 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 CCT3P49368 545 aaKnown RBP1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 THBS3P49746 956 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 PGFP49763 221 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 STK19P49842 368 aaPredicted RBP1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 NDST2P52849 883 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 CRYBA2P53672 197 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 AP3M2P53677 418 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 SH3BGRP55822 239 aaPredicted RBP1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 PHEXP78562 749 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 IL9RQ01113 521 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 OTUD4Q01804 1114 aaKnown RBP1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 BDH1Q02338 343 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 ZNF85Q03923 595 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 ZNF33BQ06732 778 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 ZNF177Q13360 481 aaPredicted RBP1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 PEX6Q13608 980 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 CUL1Q13616 776 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 IDI1Q13907 227 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 FASTKQ14296 549 aaKnown RBP1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 GANABQ14697 944 aaKnown RBP1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 PPP1R7Q15435 360 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 CD226Q15762 336 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 PCK2Q16822 640 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 HLA-BQ31612 363 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 ZNF672Q499Z4 452 aaPredicted RBP1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 TP53I3Q53FA7 332 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 CAVIN4Q5BKX8 364 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 FAM76BQ5HYJ3 339 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 ACER2Q5QJU3 275 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 MUC21Q5SSG8 566 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 CARD17Q5XLA6 110 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 CLEC2AQ6UVW9 174 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 LCLAT1Q6UWP7 414 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 KIF6Q6ZMV9 814 aa1.6□□□□□ -2.15
SNORA48.1-201ENST00000390879 C19orf35Q6ZS72 473 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms