RNA–Protein interactions for RNA: ENST00000390485.1

TRAJ53-201, Transcript of T cell receptor alpha joining 53, humanhuman

APPRIS P1 BASIC

Gene TRAJ53, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ53-201ENST00000390485 ATG2BQ96BY7 2078 aa-1.32□□□□□ -2.62
TRAJ53-201ENST00000390485 POLEQ07864 2286 aa-1.32□□□□□ -2.62
TRAJ53-201ENST00000390485 HSPG2P98160 4391 aa-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 A0A1B0GVX0 72 aa-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 ARHGEF35A5YM69 484 aa-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 G3V4G9 280 aa-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 K7ERI5 159 aa-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 ADAMDEC1O15204 470 aa-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 SNAPINO95295 136 aa-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 OR2C1O95371 312 aa-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 CALCAP01258 141 aa-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 IGLV2-23P01705 113 aa-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 SETSIPP0DME0 302 aa-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 VDAC1P21796 283 aa-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 ACKR3P25106 362 aa-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 PTBP1P26599 531 aaKnown RBP eCLIP-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 AQP1P29972 269 aa-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 MTIF2P46199 727 aaKnown RBP-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 METAP1P53582 386 aa-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 ESRRGP62508 458 aa-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 POLR2LP62875 67 aaKnown RBP-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 VAMP2P63027 116 aa-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 UBXN2AP68543 259 aa-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 HSPB3Q12988 150 aa-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 TPBGQ13641 420 aa-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 CAMK4Q16566 473 aa-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 ACKR1Q16570 336 aa-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 TMEM183BQ1AE95 376 aa-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 PYDC2Q56P42 97 aa-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 CASP12Q6UXS9 341 aa-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 NTM-AS1Q6ZSK4 140 aa-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 LCA5Q86VQ0 697 aa-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 TMEM183AQ8IXX5 376 aa-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 TEX11Q8IYF3 940 aa-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 LGI3Q8N145 548 aa-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 VPS33AQ96AX1 596 aa-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 SPACA9Q96E40 222 aaPredicted RBP-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 TIMD4Q96H15 378 aa-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 PGAM5Q96HS1 289 aa-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 VPS39Q96JC1 886 aa-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 ABHD1Q96SE0 405 aa-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 SORT1Q99523 831 aa-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 FEVQ99581 238 aa-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 MRPL32Q9BYC8 188 aaKnown RBP-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 RIC8AQ9NPQ8 531 aa-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 DEC1Q9P2X7 70 aa-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 TRPC4Q9UBN4 977 aa-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 SWAP70Q9UH65 585 aa-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 CHORDC1Q9UHD1 332 aaPredicted RBP-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 EXOC7Q9UPT5 735 aa-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 NCKAP1Q9Y2A7 1128 aa-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 PDZD2O15018 2839 aa-1.33□□□□□ -2.62
TRAJ53-201ENST00000390485 H7C0S8 307 aa-1.34□□□□□ -2.62
TRAJ53-201ENST00000390485 SGK1O00141 431 aa-1.34□□□□□ -2.62
TRAJ53-201ENST00000390485 PAPSS1O43252 624 aaPredicted RBP-1.34□□□□□ -2.62
TRAJ53-201ENST00000390485 CD5LO43866 347 aa-1.34□□□□□ -2.62
TRAJ53-201ENST00000390485 ZNF780AO75290 641 aaPredicted RBP-1.34□□□□□ -2.62
TRAJ53-201ENST00000390485 TNFSF13O75888 250 aa-1.34□□□□□ -2.62
TRAJ53-201ENST00000390485 SLC4A1P02730 911 aa-1.34□□□□□ -2.62
TRAJ53-201ENST00000390485 INAFM2P0DMQ5 153 aa-1.34□□□□□ -2.62
TRAJ53-201ENST00000390485 ZNF35P13682 527 aa-1.34□□□□□ -2.62
TRAJ53-201ENST00000390485 DPP4P27487 766 aa-1.34□□□□□ -2.62
TRAJ53-201ENST00000390485 UBE2AP49459 152 aa-1.34□□□□□ -2.62
TRAJ53-201ENST00000390485 CDH13P55290 713 aa-1.34□□□□□ -2.62
TRAJ53-201ENST00000390485 LIM2P55344 173 aa-1.34□□□□□ -2.62
TRAJ53-201ENST00000390485 ARFRP1Q13795 201 aa-1.34□□□□□ -2.62
TRAJ53-201ENST00000390485 CEACAM7Q14002 265 aa-1.34□□□□□ -2.62
TRAJ53-201ENST00000390485 FAM53BQ14153 422 aa-1.34□□□□□ -2.62
TRAJ53-201ENST00000390485 SLC5A12Q1EHB4 618 aa-1.34□□□□□ -2.62
TRAJ53-201ENST00000390485 TMEM211Q6ICI0 200 aa-1.34□□□□□ -2.62
TRAJ53-201ENST00000390485 DNM1P46Q6ZS02 220 aa-1.34□□□□□ -2.62
TRAJ53-201ENST00000390485 RFLNAQ6ZTI6 216 aa-1.34□□□□□ -2.62
TRAJ53-201ENST00000390485 SKA3Q8IX90 412 aa-1.34□□□□□ -2.62
TRAJ53-201ENST00000390485 OR8H1Q8NGG4 311 aa-1.34□□□□□ -2.62
TRAJ53-201ENST00000390485 FBXO25Q8TCJ0 367 aa-1.34□□□□□ -2.62
TRAJ53-201ENST00000390485 GPR119Q8TDV5 335 aa-1.34□□□□□ -2.62
TRAJ53-201ENST00000390485 SECISBP2LQ93073 1101 aaKnown RBP-1.34□□□□□ -2.62
TRAJ53-201ENST00000390485 P2RX5Q93086 422 aa-1.34□□□□□ -2.62
TRAJ53-201ENST00000390485 MRPL24Q96A35 216 aaKnown RBP-1.34□□□□□ -2.62
TRAJ53-201ENST00000390485 NEURL3Q96EH8 262 aa-1.34□□□□□ -2.62
TRAJ53-201ENST00000390485 CAPNS2Q96L46 248 aa-1.34□□□□□ -2.62
TRAJ53-201ENST00000390485 ERGIC2Q96RQ1 377 aa-1.34□□□□□ -2.62
TRAJ53-201ENST00000390485 CPNE1Q99829 537 aa-1.34□□□□□ -2.62
TRAJ53-201ENST00000390485 FTOQ9C0B1 505 aaKnown RBP eCLIP-1.34□□□□□ -2.62
TRAJ53-201ENST00000390485 OR11A1Q9GZK7 315 aa-1.34□□□□□ -2.62
TRAJ53-201ENST00000390485 SLC25A22Q9H936 323 aa-1.34□□□□□ -2.62
TRAJ53-201ENST00000390485 VPS54Q9P1Q0 977 aa-1.34□□□□□ -2.62
TRAJ53-201ENST00000390485 IL20RAQ9UHF4 553 aa-1.34□□□□□ -2.62
TRAJ53-201ENST00000390485 TCEAL9Q9UHQ7 104 aa-1.34□□□□□ -2.62
TRAJ53-201ENST00000390485 BTNL2Q9UIR0 455 aa-1.34□□□□□ -2.62
TRAJ53-201ENST00000390485 CPSF3Q9UKF6 684 aaKnown RBP-1.34□□□□□ -2.62
TRAJ53-201ENST00000390485 R4GN34 69 aa-1.34□□□□□ -2.62
TRAJ53-201ENST00000390485 GPATCH8Q9UKJ3 1502 aaKnown RBP-1.35□□□□□ -2.62
TRAJ53-201ENST00000390485 AHDC1Q5TGY3 1603 aaPredicted RBP-1.35□□□□□ -2.63
TRAJ53-201ENST00000390485 IGKV1D-42A0A075B6H8 117 aa-1.35□□□□□ -2.63
TRAJ53-201ENST00000390485 TRGV4A0A0C4DH28 118 aa-1.35□□□□□ -2.63
TRAJ53-201ENST00000390485 TMEM223A0PJW6 202 aa-1.35□□□□□ -2.63
TRAJ53-201ENST00000390485 C19orf81C9J6K1 198 aa-1.35□□□□□ -2.63
TRAJ53-201ENST00000390485 NPIPA3F8WFD2 350 aa-1.35□□□□□ -2.63
TRAJ53-201ENST00000390485 K7EMT4 169 aa-1.35□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms