RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 ERVK-19Q9WJR5 959 aa13.77□□□□□ -0.21
VPS9D1-201ENST00000389386 PLXNA3P51805 1871 aa13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 C5orf42Q9H799 3197 aa13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 SULT1B1O43704 296 aa13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 GALR3O60755 368 aaPredicted RBP13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 EFCAB14O75071 495 aa13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 FZD7O75084 574 aa13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 GLAP06280 429 aa13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 GALP22466 123 aa13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 S100A11P31949 105 aa13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 ACSM1Q08AH1 577 aa13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 LRRC74AQ0VAA2 488 aa13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 PLD1Q13393 1074 aa13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 SNTB2Q13425 540 aaKnown RBP13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 MACC1Q6ZN28 852 aa13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 TMPRSS9Q7Z410 1059 aa13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 NAXDQ8IW45 347 aa13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 ADGRG2Q8IZP9 1017 aa13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 FBXO15Q8NCQ5 510 aaPredicted RBP13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 SLC7A13Q8TCU3 470 aa13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 C7orf50Q9BRJ6 194 aaKnown RBP13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 NKX6-2Q9C056 277 aaPredicted RBP13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 PITHD1Q9GZP4 211 aaPredicted RBP13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 DNTTIP1Q9H147 329 aa13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 C20orf85Q9H1P6 137 aa13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 ASB8Q9H765 288 aa13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 CFAP97Q9P2B7 532 aa13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 MGAT4DA6NG13 374 aa13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 AGAP14A8MT82 685 aa13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 SUSD5O60279 629 aa13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 WNT1P04628 370 aa13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 GABRA1P14867 456 aa13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 TRIM23P36406 574 aa13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 KCNJ5P48544 419 aa13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 RAB13P51153 203 aa13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 NFATC2Q13469 925 aa13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 HFEQ30201 348 aa13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 HECTD3Q5T447 861 aa13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 SLC36A4Q6YBV0 504 aa13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 SLITRK4Q8IW52 837 aa13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 GPR32P1Q8NGA4 272 aa13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 MAGEH1Q9H213 219 aa13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 ZNF768Q9H5H4 540 aaKnown RBP13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 MVB12BQ9H7P6 319 aa13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 DNAJC11Q9NVH1 559 aa13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 CHD7Q9P2D1 2997 aa13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 FLVCR2Q9UPI3 526 aa13.76□□□□□ -0.21
VPS9D1-201ENST00000389386 CHD5Q8TDI0 1954 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 KIAA1671Q9BY89 1806 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 GSAPA4D1B5 854 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 F5H5T6 163 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 RP2O75695 350 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 ETHE1O95571 254 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 HPP00738 406 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 KLKB1P03952 638 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 URODP06132 367 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 ACRP10323 421 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 MMP15P51511 669 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 SIM1P81133 766 aaPredicted RBP13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 SHC2P98077 582 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 HTR4Q13639 388 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 SLC22A10Q63ZE4 541 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 CD300LDQ6UXZ3 194 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 UBE2R2Q712K3 238 aaPredicted RBP13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 RBM45Q8IUH3 476 aaKnown RBP13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 OR5M9Q8NGP3 310 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 OR5AK3PQ8NH89 298 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 AUTS2Q8WXX7 1259 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 ZNF649Q9BS31 505 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 VN1R3Q9BXE9 311 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 SEMA4CQ9C0C4 833 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 BHLHE41Q9C0J9 482 aaPredicted RBP13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 ABCG4Q9H172 646 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 MGAT4CQ9UBM8 478 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 PRKAG2Q9UGJ0 569 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 GPR52Q9Y2T5 361 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 TRAV20A0A0B4J274 112 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 TRABD2BA6NFA1 517 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 CHURC1-FNTBB4DL54 471 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 SH3BGRLO75368 114 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 GIPP09681 153 aaPredicted RBP13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 E2F1Q01094 437 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 KLF9Q13886 244 aaPredicted RBP13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 KIAA1211LQ6NV74 962 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 SLC30A6Q6NXT4 461 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 LINGO4Q6UY18 593 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 TMUB2Q71RG4 321 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 TECPR1Q7Z6L1 1165 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 NPAS4Q8IUM7 802 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 SPICQ8N5J4 248 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 OR11G2Q8NGC1 345 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 YIPF4Q9BSR8 244 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 WDR26Q9H7D7 661 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 BIN3Q9NQY0 253 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 CA10Q9NS85 328 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 BABAM2Q9NXR7 383 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 PTGFRNQ9P2B2 879 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 GULP1Q9UBP9 304 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 PLCL2Q9UPR0 1127 aa13.75□□□□□ -0.21
VPS9D1-201ENST00000389386 NME6O75414 186 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms