RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 NKX6-1P78426 367 aaPredicted RBP23.84■■□□□ 1.41
NPHP3-202ENST00000383282 SHEQ5VZ18 495 aa23.84■■□□□ 1.41
NPHP3-202ENST00000383282 FAM71E1Q6IPT2 247 aa23.84■■□□□ 1.41
NPHP3-202ENST00000383282 VWA1Q6PCB0 445 aa23.84■■□□□ 1.41
NPHP3-202ENST00000383282 FAM76AQ8TAV0 307 aa23.84■■□□□ 1.41
NPHP3-202ENST00000383282 AENQ8WTP8 325 aaKnown RBP23.84■■□□□ 1.41
NPHP3-202ENST00000383282 PGM2Q96G03 612 aa23.84■■□□□ 1.41
NPHP3-202ENST00000383282 SLC39A3Q9BRY0 314 aa23.84■■□□□ 1.41
NPHP3-202ENST00000383282 PINK1Q9BXM7 581 aa23.84■■□□□ 1.41
NPHP3-202ENST00000383282 GLIPR2Q9H4G4 154 aa23.84■■□□□ 1.41
NPHP3-202ENST00000383282 C3orf14Q9HBI5 128 aa23.84■■□□□ 1.41
NPHP3-202ENST00000383282 FAM120CQ9NX05 1096 aaKnown RBP23.84■■□□□ 1.41
NPHP3-202ENST00000383282 RAB21Q9UL25 225 aa23.84■■□□□ 1.41
NPHP3-202ENST00000383282 POLR3HQ9Y535 204 aaPredicted RBP23.84■■□□□ 1.41
NPHP3-202ENST00000383282 A0A1W2PPR1 153 aa23.83■■□□□ 1.41
NPHP3-202ENST00000383282 UPK1AO00322 258 aa23.83■■□□□ 1.41
NPHP3-202ENST00000383282 MYL2P10916 166 aa23.83■■□□□ 1.41
NPHP3-202ENST00000383282 RFX3P48380 749 aa23.83■■□□□ 1.41
NPHP3-202ENST00000383282 FOXA1P55317 472 aa23.83■■□□□ 1.41
NPHP3-202ENST00000383282 FGFBP1Q14512 234 aa23.83■■□□□ 1.41
NPHP3-202ENST00000383282 OR2L13Q8N349 312 aa23.83■■□□□ 1.41
NPHP3-202ENST00000383282 FIG4Q92562 907 aa23.83■■□□□ 1.41
NPHP3-202ENST00000383282 ZNF845Q96IR2 970 aaPredicted RBP23.83■■□□□ 1.41
NPHP3-202ENST00000383282 C18orf12Q96KH6 178 aa23.83■■□□□ 1.41
NPHP3-202ENST00000383282 MED18Q9BUE0 208 aa23.83■■□□□ 1.41
NPHP3-202ENST00000383282 ZNF337Q9Y3M9 751 aa23.83■■□□□ 1.41
NPHP3-202ENST00000383282 MED12LQ86YW9 2145 aa23.83■■□□□ 1.4
NPHP3-202ENST00000383282 H3BML4 177 aa23.82■■□□□ 1.4
NPHP3-202ENST00000383282 ARHGEF9O43307 516 aa23.82■■□□□ 1.4
NPHP3-202ENST00000383282 CTIFO43310 598 aaKnown RBP23.82■■□□□ 1.4
NPHP3-202ENST00000383282 RSL1D1O76021 490 aaKnown RBP23.82■■□□□ 1.4
NPHP3-202ENST00000383282 IL33O95760 270 aa23.82■■□□□ 1.4
NPHP3-202ENST00000383282 POU2F1P14859 743 aa23.82■■□□□ 1.4
NPHP3-202ENST00000383282 ADSLP30566 484 aaPredicted RBP23.82■■□□□ 1.4
NPHP3-202ENST00000383282 KCNJ5P48544 419 aa23.82■■□□□ 1.4
NPHP3-202ENST00000383282 RPS3AP61247 264 aaKnown RBP23.82■■□□□ 1.4
NPHP3-202ENST00000383282 SIRPAP78324 504 aa23.82■■□□□ 1.4
NPHP3-202ENST00000383282 IKBIPQ70UQ0 350 aa23.82■■□□□ 1.4
NPHP3-202ENST00000383282 DUSP19Q8WTR2 217 aa23.82■■□□□ 1.4
NPHP3-202ENST00000383282 CAVIN3Q969G5 261 aa23.82■■□□□ 1.4
NPHP3-202ENST00000383282 KLHL28Q9NXS3 571 aa23.82■■□□□ 1.4
NPHP3-202ENST00000383282 ELOVL5Q9NYP7 299 aa23.82■■□□□ 1.4
NPHP3-202ENST00000383282 FLRT3Q9NZU0 649 aa23.82■■□□□ 1.4
NPHP3-202ENST00000383282 C6orf203Q9P0P8 240 aaPredicted RBP23.82■■□□□ 1.4
NPHP3-202ENST00000383282 TBK1Q9UHD2 729 aa23.82■■□□□ 1.4
NPHP3-202ENST00000383282 ZNF175Q9Y473 711 aa23.82■■□□□ 1.4
NPHP3-202ENST00000383282 OR2M5A3KFT3 312 aa23.81■■□□□ 1.4
NPHP3-202ENST00000383282 TTC36A6NLP5 189 aa23.81■■□□□ 1.4
NPHP3-202ENST00000383282 UBFD1O14562 309 aaKnown RBP23.81■■□□□ 1.4
NPHP3-202ENST00000383282 GLRA3O75311 464 aa23.81■■□□□ 1.4
NPHP3-202ENST00000383282 PSMG1O95456 288 aa23.81■■□□□ 1.4
NPHP3-202ENST00000383282 KIR2DL2P43627 348 aaPredicted RBP23.81■■□□□ 1.4
NPHP3-202ENST00000383282 PRSS53Q2L4Q9 553 aa23.81■■□□□ 1.4
NPHP3-202ENST00000383282 GLYR1Q49A26 553 aaPredicted RBP23.81■■□□□ 1.4
NPHP3-202ENST00000383282 ZYG11AQ6WRX3 759 aa23.81■■□□□ 1.4
NPHP3-202ENST00000383282 TRIM46Q7Z4K8 759 aa23.81■■□□□ 1.4
NPHP3-202ENST00000383282 BTLAQ7Z6A9 289 aa23.81■■□□□ 1.4
NPHP3-202ENST00000383282 PUM2Q8TB72 1066 aaKnown RBP eCLIP23.81■■□□□ 1.4
NPHP3-202ENST00000383282 GFM2Q969S9 779 aaKnown RBP23.81■■□□□ 1.4
NPHP3-202ENST00000383282 ELP4Q96EB1 424 aa23.81■■□□□ 1.4
NPHP3-202ENST00000383282 C1GALT1C1Q96EU7 318 aa23.81■■□□□ 1.4
NPHP3-202ENST00000383282 AMDHD1Q96NU7 426 aa23.81■■□□□ 1.4
NPHP3-202ENST00000383282 WFIKKN1Q96NZ8 548 aa23.81■■□□□ 1.4
NPHP3-202ENST00000383282 LMF2Q9BU23 707 aaKnown RBP23.81■■□□□ 1.4
NPHP3-202ENST00000383282 TBL1XR1Q9BZK7 514 aa23.81■■□□□ 1.4
NPHP3-202ENST00000383282 OPN3Q9H1Y3 402 aaPredicted RBP23.81■■□□□ 1.4
NPHP3-202ENST00000383282 EMC8O43402 210 aa23.8■■□□□ 1.4
NPHP3-202ENST00000383282 KCNH1O95259 989 aa23.8■■□□□ 1.4
NPHP3-202ENST00000383282 SUCLG1P53597 346 aaKnown RBP23.8■■□□□ 1.4
NPHP3-202ENST00000383282 PON3Q15166 354 aa23.8■■□□□ 1.4
NPHP3-202ENST00000383282 CFAP157Q5JU67 520 aa23.8■■□□□ 1.4
NPHP3-202ENST00000383282 ZNF474Q6S9Z5 364 aaPredicted RBP23.8■■□□□ 1.4
NPHP3-202ENST00000383282 MARCH3Q86UD3 253 aa23.8■■□□□ 1.4
NPHP3-202ENST00000383282 P3H2Q8IVL5 708 aa23.8■■□□□ 1.4
NPHP3-202ENST00000383282 PIGTQ969N2 578 aa23.8■■□□□ 1.4
NPHP3-202ENST00000383282 RNF122Q9H9V4 155 aa23.8■■□□□ 1.4
NPHP3-202ENST00000383282 STOML1Q9UBI4 398 aa23.8■■□□□ 1.4
NPHP3-202ENST00000383282 AP4B1Q9Y6B7 739 aa23.8■■□□□ 1.4
NPHP3-202ENST00000383282 UQCRHLA0A096LP55 91 aa23.79■■□□□ 1.4
NPHP3-202ENST00000383282 H0YC42 278 aa23.79■■□□□ 1.4
NPHP3-202ENST00000383282 ERLIN1O75477 346 aa23.79■■□□□ 1.4
NPHP3-202ENST00000383282 INHBBP09529 407 aa23.79■■□□□ 1.4
NPHP3-202ENST00000383282 IFI6P09912 130 aa23.79■■□□□ 1.4
NPHP3-202ENST00000383282 FCGR2AP12318 317 aa23.79■■□□□ 1.4
NPHP3-202ENST00000383282 TPD52P55327 224 aaPredicted RBP23.79■■□□□ 1.4
NPHP3-202ENST00000383282 CLDN15P56746 228 aa23.79■■□□□ 1.4
NPHP3-202ENST00000383282 OCRLQ01968 901 aa23.79■■□□□ 1.4
NPHP3-202ENST00000383282 C17orf67Q0P5P2 114 aa23.79■■□□□ 1.4
NPHP3-202ENST00000383282 SGCBQ16585 318 aa23.79■■□□□ 1.4
NPHP3-202ENST00000383282 NOXRED1Q6NXP6 359 aa23.79■■□□□ 1.4
NPHP3-202ENST00000383282 FRMD7Q6ZUT3 714 aa23.79■■□□□ 1.4
NPHP3-202ENST00000383282 CXorf67Q86X51 503 aaPredicted RBP23.79■■□□□ 1.4
NPHP3-202ENST00000383282 OR5M1Q8NGP8 315 aa23.79■■□□□ 1.4
NPHP3-202ENST00000383282 FNDC9Q8TBE3 224 aa23.79■■□□□ 1.4
NPHP3-202ENST00000383282 PIK3IP1Q96FE7 263 aa23.79■■□□□ 1.4
NPHP3-202ENST00000383282 PIP5K1AQ99755 562 aa23.79■■□□□ 1.4
NPHP3-202ENST00000383282 RTN4RQ9BZR6 473 aa23.79■■□□□ 1.4
NPHP3-202ENST00000383282 IQCGQ9H095 443 aaKnown RBP23.79■■□□□ 1.4
NPHP3-202ENST00000383282 HHATLQ9HCP6 504 aa23.79■■□□□ 1.4
NPHP3-202ENST00000383282 PROCRQ9UNN8 238 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms