RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 PPP2R2AP63151 447 aa11.76□□□□□ -0.53
RPAIN-202ENST00000381208 SNTB1Q13884 538 aaKnown RBP11.76□□□□□ -0.53
RPAIN-202ENST00000381208 SH2D4BQ5SQS7 431 aa11.76□□□□□ -0.53
RPAIN-202ENST00000381208 SWT1Q5T5J6 900 aaKnown RBP11.76□□□□□ -0.53
RPAIN-202ENST00000381208 OR5M10Q6IEU7 315 aa11.76□□□□□ -0.53
RPAIN-202ENST00000381208 TMEM107Q6UX40 140 aa11.76□□□□□ -0.53
RPAIN-202ENST00000381208 ZFP28Q8NHY6 868 aa11.76□□□□□ -0.53
RPAIN-202ENST00000381208 SMPDL3BQ92485 455 aa11.76□□□□□ -0.53
RPAIN-202ENST00000381208 INTS12Q96CB8 462 aaKnown RBP11.76□□□□□ -0.53
RPAIN-202ENST00000381208 ZBED6CLQ96FA7 236 aaPredicted RBP11.76□□□□□ -0.53
RPAIN-202ENST00000381208 AMDHD1Q96NU7 426 aa11.76□□□□□ -0.53
RPAIN-202ENST00000381208 PIGQQ9BRB3 760 aa11.76□□□□□ -0.53
RPAIN-202ENST00000381208 C1orf109Q9NX04 203 aa11.76□□□□□ -0.53
RPAIN-202ENST00000381208 TMED5Q9Y3A6 229 aa11.76□□□□□ -0.53
RPAIN-202ENST00000381208 POLR3HQ9Y535 204 aaPredicted RBP11.76□□□□□ -0.53
RPAIN-202ENST00000381208 PRRC2AP48634 2157 aaKnown RBP11.75□□□□□ -0.53
RPAIN-202ENST00000381208 A0A1W2PPM1 405 aa11.75□□□□□ -0.53
RPAIN-202ENST00000381208 A8MXE2 369 aa11.75□□□□□ -0.53
RPAIN-202ENST00000381208 SCO2O43819 266 aa11.75□□□□□ -0.53
RPAIN-202ENST00000381208 FADS1O60427 444 aa11.75□□□□□ -0.53
RPAIN-202ENST00000381208 TBX19O60806 448 aa11.75□□□□□ -0.53
RPAIN-202ENST00000381208 SEC22BO75396 215 aa11.75□□□□□ -0.53
RPAIN-202ENST00000381208 RAF1P04049 648 aa11.75□□□□□ -0.53
RPAIN-202ENST00000381208 HK1P19367 917 aa11.75□□□□□ -0.53
RPAIN-202ENST00000381208 LCN1P31025 176 aa11.75□□□□□ -0.53
RPAIN-202ENST00000381208 STARP49675 285 aa11.75□□□□□ -0.53
RPAIN-202ENST00000381208 AGFG1P52594 562 aaKnown RBP11.75□□□□□ -0.53
RPAIN-202ENST00000381208 RPS3AP61247 264 aaKnown RBP11.75□□□□□ -0.53
RPAIN-202ENST00000381208 C17orf67Q0P5P2 114 aa11.75□□□□□ -0.53
RPAIN-202ENST00000381208 FOXF2Q12947 444 aa11.75□□□□□ -0.53
RPAIN-202ENST00000381208 RAET1LQ5VY80 246 aa11.75□□□□□ -0.53
RPAIN-202ENST00000381208 PAMR1Q6UXH9 720 aa11.75□□□□□ -0.53
RPAIN-202ENST00000381208 TGIF2LYQ8IUE0 185 aa11.75□□□□□ -0.53
RPAIN-202ENST00000381208 LRRN4CLQ8ND94 238 aa11.75□□□□□ -0.53
RPAIN-202ENST00000381208 OR2M3Q8NG83 312 aa11.75□□□□□ -0.53
RPAIN-202ENST00000381208 OR4N2Q8NGD1 307 aa11.75□□□□□ -0.53
RPAIN-202ENST00000381208 UBLCP1Q8WVY7 318 aaPredicted RBP11.75□□□□□ -0.53
RPAIN-202ENST00000381208 NRGNQ92686 78 aa11.75□□□□□ -0.53
RPAIN-202ENST00000381208 CCT7Q99832 543 aa11.75□□□□□ -0.53
RPAIN-202ENST00000381208 G6PC3Q9BUM1 346 aa11.75□□□□□ -0.53
RPAIN-202ENST00000381208 TMUB1Q9BVT8 246 aa11.75□□□□□ -0.53
RPAIN-202ENST00000381208 TBL1XR1Q9BZK7 514 aa11.75□□□□□ -0.53
RPAIN-202ENST00000381208 DSN1Q9H410 356 aa11.75□□□□□ -0.53
RPAIN-202ENST00000381208 LRTM1Q9HBL6 345 aa11.75□□□□□ -0.53
RPAIN-202ENST00000381208 GALNT8Q9NY28 637 aa11.75□□□□□ -0.53
RPAIN-202ENST00000381208 RPH3AQ9Y2J0 694 aaPredicted RBP11.75□□□□□ -0.53
RPAIN-202ENST00000381208 ZNF175Q9Y473 711 aa11.75□□□□□ -0.53
RPAIN-202ENST00000381208 IGLV3-32A0A0A0MS00 114 aa11.74□□□□□ -0.53
RPAIN-202ENST00000381208 A0A1W2PNV4 684 aa11.74□□□□□ -0.53
RPAIN-202ENST00000381208 SLC22A20A6NK97 555 aa11.74□□□□□ -0.53
RPAIN-202ENST00000381208 AZIN1O14977 448 aa11.74□□□□□ -0.53
RPAIN-202ENST00000381208 PDPK1O15530 556 aa11.74□□□□□ -0.53
RPAIN-202ENST00000381208 TNFRSF21O75509 655 aa11.74□□□□□ -0.53
RPAIN-202ENST00000381208 PRPS2P11908 318 aa11.74□□□□□ -0.53
RPAIN-202ENST00000381208 KRT4P19013 534 aa11.74□□□□□ -0.53
RPAIN-202ENST00000381208 GPC1P35052 558 aa11.74□□□□□ -0.53
RPAIN-202ENST00000381208 ASMTP46597 345 aa11.74□□□□□ -0.53
RPAIN-202ENST00000381208 B3GALT5-AS1P59052 145 aa11.74□□□□□ -0.53
RPAIN-202ENST00000381208 SLC18A2Q05940 514 aa11.74□□□□□ -0.53
RPAIN-202ENST00000381208 KEAP1Q14145 624 aa11.74□□□□□ -0.53
RPAIN-202ENST00000381208 KIAA0040Q15053 153 aa11.74□□□□□ -0.53
RPAIN-202ENST00000381208 ZCCHC12Q6PEW1 402 aa11.74□□□□□ -0.53
RPAIN-202ENST00000381208 R3HCC1LQ7Z5L2 792 aaKnown RBP11.74□□□□□ -0.53
RPAIN-202ENST00000381208 LUZP2Q86TE4 346 aa11.74□□□□□ -0.53
RPAIN-202ENST00000381208 RIBC1Q8N443 379 aaPredicted RBP11.74□□□□□ -0.53
RPAIN-202ENST00000381208 CDRT4Q8N9R6 151 aa11.74□□□□□ -0.53
RPAIN-202ENST00000381208 LINC01560Q8TB33 94 aa11.74□□□□□ -0.53
RPAIN-202ENST00000381208 GFM2Q969S9 779 aaKnown RBP11.74□□□□□ -0.53
RPAIN-202ENST00000381208 MTERF3Q96E29 417 aa11.74□□□□□ -0.53
RPAIN-202ENST00000381208 FCRL1Q96LA6 429 aa11.74□□□□□ -0.53
RPAIN-202ENST00000381208 REPIN1Q9BWE0 567 aaKnown RBP11.74□□□□□ -0.53
RPAIN-202ENST00000381208 REEP4Q9H6H4 257 aa11.74□□□□□ -0.53
RPAIN-202ENST00000381208 ACSS1Q9NUB1 689 aaPredicted RBP11.74□□□□□ -0.53
RPAIN-202ENST00000381208 EIF3LQ9Y262 564 aaKnown RBP11.74□□□□□ -0.53
RPAIN-202ENST00000381208 PLEKHA6Q9Y2H5 1048 aa11.74□□□□□ -0.53
RPAIN-202ENST00000381208 CCL27Q9Y4X3 112 aa11.74□□□□□ -0.53
RPAIN-202ENST00000381208 A0A087WZY1 265 aa11.73□□□□□ -0.53
RPAIN-202ENST00000381208 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.73□□□□□ -0.53
RPAIN-202ENST00000381208 SH3D21A4FU49 640 aa11.73□□□□□ -0.53
RPAIN-202ENST00000381208 TRIM13O60858 407 aa11.73□□□□□ -0.53
RPAIN-202ENST00000381208 TNFSF13O75888 250 aa11.73□□□□□ -0.53
RPAIN-202ENST00000381208 SOX30O94993 753 aa11.73□□□□□ -0.53
RPAIN-202ENST00000381208 HSPA4LO95757 839 aa11.73□□□□□ -0.53
RPAIN-202ENST00000381208 NGFRP08138 427 aa11.73□□□□□ -0.53
RPAIN-202ENST00000381208 FCGR2AP12318 317 aa11.73□□□□□ -0.53
RPAIN-202ENST00000381208 FOSL1P15407 271 aa11.73□□□□□ -0.53
RPAIN-202ENST00000381208 GABRA3P34903 492 aa11.73□□□□□ -0.53
RPAIN-202ENST00000381208 RPL3P39023 403 aaKnown RBP11.73□□□□□ -0.53
RPAIN-202ENST00000381208 MANFP55145 182 aaKnown RBP11.73□□□□□ -0.53
RPAIN-202ENST00000381208 PRR5P85299 388 aa11.73□□□□□ -0.53
RPAIN-202ENST00000381208 FAM219BQ5XKK7 198 aa11.73□□□□□ -0.53
RPAIN-202ENST00000381208 GCNT2Q8N0V5 402 aa11.73□□□□□ -0.53
RPAIN-202ENST00000381208 HOXB13Q92826 284 aaPredicted RBP11.73□□□□□ -0.53
RPAIN-202ENST00000381208 PPCDCQ96CD2 204 aa11.73□□□□□ -0.53
RPAIN-202ENST00000381208 C1GALT1C1Q96EU7 318 aa11.73□□□□□ -0.53
RPAIN-202ENST00000381208 SLC39A3Q9BRY0 314 aa11.73□□□□□ -0.53
RPAIN-202ENST00000381208 EML4Q9HC35 981 aaKnown RBP11.73□□□□□ -0.53
RPAIN-202ENST00000381208 MKS1Q9NXB0 559 aa11.73□□□□□ -0.53
RPAIN-202ENST00000381208 PAQR5Q9NXK6 330 aaPredicted RBP11.73□□□□□ -0.53
RPAIN-202ENST00000381208 ELOVL5Q9NYP7 299 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms