RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 CHMP1AQ9HD42 196 aaPredicted RBP6.14□□□□□ -1.43
NEDD9-202ENST00000379446 C12orf4Q9NQ89 552 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 IL17CQ9P0M4 197 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 TNFRSF10DQ9UBN6 386 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 AASSQ9UDR5 926 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 ZNF223Q9UK11 482 aaPredicted RBP6.14□□□□□ -1.43
NEDD9-202ENST00000379446 CORO2BQ9UQ03 480 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 MYO7BQ6PIF6 2116 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 IQCMA0A1B0GVH7 501 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 AGR2O95994 175 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 ADORA3P0DMS8 318 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 POLR2JP52435 117 aaKnown RBP6.14□□□□□ -1.43
NEDD9-202ENST00000379446 BNIP2Q12982 314 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 LCP2Q13094 533 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 SEMA3BQ13214 749 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 EFR3AQ14156 821 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 OR4D1Q15615 310 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 SLC5A12Q1EHB4 618 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 ZNF630Q2M218 657 aaPredicted RBP6.14□□□□□ -1.43
NEDD9-202ENST00000379446 FAM98BQ52LJ0 330 aaKnown RBP6.14□□□□□ -1.43
NEDD9-202ENST00000379446 EIPR1Q53HC9 387 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 NHSL2Q5HYW2 709 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 DENND5AQ6IQ26 1287 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 ANKRD26P1Q6NSI1 321 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 RANBP10Q6VN20 620 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 RETREG3Q86VR2 466 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 ABHD11Q8NFV4 315 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 CENPNQ96H22 339 aaPredicted RBP6.14□□□□□ -1.43
NEDD9-202ENST00000379446 MUS81Q96NY9 551 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 BIRC8Q96P09 236 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 GPR87Q9BY21 358 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 DPH1Q9BZG8 443 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 GSTO2Q9H4Y5 243 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.14□□□□□ -1.43
NEDD9-202ENST00000379446 C1orf109Q9NX04 203 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 TOR4AQ9NXH8 423 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 PCOLCE2Q9UKZ9 415 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 UGT2A1Q9Y4X1 527 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 CACNA1CQ13936 2221 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.13□□□□□ -1.43
NEDD9-202ENST00000379446 A0A1W2PRG6 482 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 OTOL1A6NHN0 477 aaPredicted RBP6.13□□□□□ -1.43
NEDD9-202ENST00000379446 ACOT8O14734 319 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 MATN1P21941 496 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 PPIBP23284 216 aaKnown RBP6.13□□□□□ -1.43
NEDD9-202ENST00000379446 CCT3P49368 545 aaKnown RBP6.13□□□□□ -1.43
NEDD9-202ENST00000379446 HSD17B7P56937 341 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 DNAJB13P59910 316 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 SCN1BQ07699 218 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 TRAF3Q13114 568 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 PTPRRQ15256 657 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 TMEM176BQ3YBM2 270 aaPredicted RBP6.13□□□□□ -1.43
NEDD9-202ENST00000379446 C10orf62Q5T681 223 aaPredicted RBP6.13□□□□□ -1.43
NEDD9-202ENST00000379446 PRAMEF8Q5VWM4 474 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 PRAMEF7Q5VXH5 474 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 CXorf57Q6NSI4 855 aaKnown RBP6.13□□□□□ -1.43
NEDD9-202ENST00000379446 NXPE4Q6UWF7 544 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 SPNS3Q6ZMD2 512 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 SPATC1Q76KD6 591 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 FGD2Q7Z6J4 655 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 TRAPPC6BQ86SZ2 158 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 KMT5CQ86Y97 462 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 C8orf59Q8N0T1 100 aaPredicted RBP6.13□□□□□ -1.43
NEDD9-202ENST00000379446 DTX3Q8N9I9 347 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 OR6K6Q8NGW6 343 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 PROKR1Q8TCW9 393 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 ABHD17AQ96GS6 310 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 SLC39A13Q96H72 371 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 ADAD1Q96M93 576 aaKnown RBP6.13□□□□□ -1.43
NEDD9-202ENST00000379446 COL21A1Q96P44 957 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 PKP4Q99569 1192 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 DUSP26Q9BV47 211 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 SMPD3Q9NY59 655 aaPredicted RBP6.13□□□□□ -1.43
NEDD9-202ENST00000379446 TAS2R10Q9NYW0 307 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 LHX3Q9UBR4 397 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 USP22Q9UPT9 525 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 MSRB2Q9Y3D2 182 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 SHROOM3Q8TF72 1996 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 TRGV5A0A0B4J1U4 118 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 BBIP1A8MTZ0 92 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 IGHV3-9P01782 118 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 DBIP07108 87 aaKnown RBP6.13□□□□□ -1.43
NEDD9-202ENST00000379446 ALDOCP09972 364 aaKnown RBP6.13□□□□□ -1.43
NEDD9-202ENST00000379446 PRPS2P11908 318 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 SMIM11AP58511 58 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 CSNK2A1P68400 391 aaPredicted RBP6.13□□□□□ -1.43
NEDD9-202ENST00000379446 TRAP1Q12931 704 aaKnown RBP6.13□□□□□ -1.43
NEDD9-202ENST00000379446 LAPTM4AQ15012 233 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 NCF4Q15080 339 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 RFPL4BQ6ZWI9 263 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 SYVN1Q86TM6 617 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 ISCA2Q86U28 154 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 ZDHHC13Q8IUH4 622 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 GCNT2Q8N0V5 402 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 OR14A16Q8NHC5 309 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 BRIX1Q8TDN6 353 aaKnown RBP6.13□□□□□ -1.43
NEDD9-202ENST00000379446 ROPN1LQ96C74 230 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 GPR78Q96P69 363 aa6.13□□□□□ -1.43
NEDD9-202ENST00000379446 POLDIP3Q9BY77 421 aaKnown RBP6.13□□□□□ -1.43
NEDD9-202ENST00000379446 ACTRT3Q9BYD9 372 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms