RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 DLL3Q9NYJ7 618 aa6.87□□□□□ -1.31
GPCPD1-201ENST00000379019 NUDT4Q9NZJ9 180 aa6.87□□□□□ -1.31
GPCPD1-201ENST00000379019 TPRKBQ9Y3C4 175 aa6.87□□□□□ -1.31
GPCPD1-201ENST00000379019 HS3ST3A1Q9Y663 406 aa6.87□□□□□ -1.31
GPCPD1-201ENST00000379019 SCAMP2O15127 329 aaKnown RBP6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 STX7O15400 261 aaKnown RBP6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 RFPL3O75679 317 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 TRBC1P01850 177 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 HOXC4P09017 264 aaPredicted RBP6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 ITGA2P17301 1181 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 MPLP40238 635 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 PTGER3P43115 390 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 ELP6Q0PNE2 266 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 LTB4RQ15722 352 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 PLA1AQ53H76 456 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 PDZK1Q5T2W1 519 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 RAET1GQ6H3X3 334 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 FAM83HQ6ZRV2 1179 aaPredicted RBP6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 EPYCQ99645 322 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 SLC7A5P2Q9GIP4 190 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 TRIM45Q9H8W5 580 aaPredicted RBP6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 REEP1Q9H902 201 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 EXOSC3Q9NQT5 275 aaKnown RBP6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 KCND3Q9UK17 655 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 ELF5Q9UKW6 265 aaPredicted RBP6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 A0A1W2PQ72 361 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 CENPXA8MT69 81 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 PSIP1O75475 530 aaKnown RBP6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 PCDH8O95206 1070 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 POP4O95707 220 aaKnown RBP6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 CXCL2P19875 107 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 ANOS1P23352 680 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 AP1S1P61966 158 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 ASAH1Q13510 395 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 ZNF267Q14586 743 aaPredicted RBP6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 ZNF805Q5CZA5 627 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 TEX261Q6UWH6 196 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 HORMAD1Q86X24 394 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 ZBTB2Q8N680 514 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 RASGEF1AQ8N9B8 481 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 L3MBTL4Q8NA19 623 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 NRBF2Q96F24 287 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 MNTQ99583 582 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 DHRS9Q9BPW9 319 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 RPRD1BQ9NQG5 326 aaKnown RBP6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 FBXW2Q9UKT8 454 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 U3KQ87 197 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 IGKV1-8A0A0C4DH67 115 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 PRRT4C9JH25 899 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 HMGN4O00479 90 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 COX7A2P14406 83 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 EPB42P16452 691 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 RPS3P23396 243 aaKnown RBP eCLIP6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 IL12RB1P42701 662 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 EXOSC2Q13868 293 aaKnown RBP6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 CST6Q15828 149 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 GARNL3Q5VVW2 1013 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 ZNF730Q6ZMV8 503 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 UBE2R2Q712K3 238 aaPredicted RBP6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 PRICKLE2Q7Z3G6 844 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 COMMD6Q7Z4G1 85 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 FAM109AQ8N4B1 249 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 ARL14Q8N4G2 192 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 ZNF655Q8N720 491 aaPredicted RBP6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 TBX5Q99593 518 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 ZNF559Q9BR84 538 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 CINPQ9BW66 212 aaPredicted RBP6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 POLR2J2Q9GZM3 115 aaKnown RBP6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 SEMA4GQ9NTN9 838 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 C20orf141Q9NUB4 165 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 TVP23BQ9NYZ1 205 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 KIF17Q9P2E2 1029 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 CRNNQ9UBG3 495 aaPredicted RBP6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 C16orf96A6NNT2 1141 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 ISM1B1AKI9 464 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 TMPRSS11DO60235 418 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 FCMRO60667 390 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 WNT1P04628 370 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 EPHX1P07099 455 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 CD3GP09693 182 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 NPPBP16860 134 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 HMGA2P52926 109 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 SEC13P55735 322 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 GNG2P59768 71 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 BTG1P62324 171 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 ILKQ13418 452 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 CAMK2DQ13557 499 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 FGFBP1Q14512 234 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 ZBTB37Q5TC79 503 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 SLC30A6Q6NXT4 461 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 LRRC56Q8IYG6 542 aaPredicted RBP6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 GPR135Q8IZ08 494 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 NXPE1Q8N323 547 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 STX19Q8N4C7 294 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 ESX1Q8N693 406 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 C16orf58Q96GQ5 468 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 LRR1Q96L50 414 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 TMEM9BQ9NQ34 198 aa6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 STOX2Q9P2F5 926 aaPredicted RBP6.86□□□□□ -1.31
GPCPD1-201ENST00000379019 HSPE1-MOB4S4R3N1 261 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms