RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 LINC00271P0C7V0 271 aa15.57■□□□□ 0.08
PCDHA1-201ENST00000378133 LIMS3P0CW19 117 aa15.57■□□□□ 0.08
PCDHA1-201ENST00000378133 LIMS4P0CW20 117 aa15.57■□□□□ 0.08
PCDHA1-201ENST00000378133 ADH5P11766 374 aa15.57■□□□□ 0.08
PCDHA1-201ENST00000378133 ATF4P18848 351 aaPredicted RBP15.57■□□□□ 0.08
PCDHA1-201ENST00000378133 CELP19835 753 aa15.57■□□□□ 0.08
PCDHA1-201ENST00000378133 MTNR1AP48039 350 aa15.57■□□□□ 0.08
PCDHA1-201ENST00000378133 CCR8P51685 355 aa15.57■□□□□ 0.08
PCDHA1-201ENST00000378133 DPTQ07507 201 aa15.57■□□□□ 0.08
PCDHA1-201ENST00000378133 COL28A1Q2UY09 1125 aa15.57■□□□□ 0.08
PCDHA1-201ENST00000378133 FNDC3BQ53EP0 1204 aaKnown RBP15.57■□□□□ 0.08
PCDHA1-201ENST00000378133 GRASPQ7Z6J2 395 aaPredicted RBP15.57■□□□□ 0.08
PCDHA1-201ENST00000378133 GALNT11Q8NCW6 608 aa15.57■□□□□ 0.08
PCDHA1-201ENST00000378133 OR6T1Q8NGN1 323 aa15.57■□□□□ 0.08
PCDHA1-201ENST00000378133 THAP7Q9BT49 309 aaPredicted RBP15.57■□□□□ 0.08
PCDHA1-201ENST00000378133 PRR14Q9BWN1 585 aa15.57■□□□□ 0.08
PCDHA1-201ENST00000378133 EMC7Q9NPA0 242 aa15.57■□□□□ 0.08
PCDHA1-201ENST00000378133 MRPS18AQ9NVS2 196 aaKnown RBP15.57■□□□□ 0.08
PCDHA1-201ENST00000378133 A0A1W2PRQ8 180 aa15.56■□□□□ 0.08
PCDHA1-201ENST00000378133 GLOD5A6NK44 160 aa15.56■□□□□ 0.08
PCDHA1-201ENST00000378133 GABRPO00591 440 aa15.56■□□□□ 0.08
PCDHA1-201ENST00000378133 STATHP02808 62 aa15.56■□□□□ 0.08
PCDHA1-201ENST00000378133 EFNB1P98172 346 aa15.56■□□□□ 0.08
PCDHA1-201ENST00000378133 RPA4Q13156 261 aa15.56■□□□□ 0.08
PCDHA1-201ENST00000378133 B3GLCTQ6Y288 498 aa15.56■□□□□ 0.08
PCDHA1-201ENST00000378133 ZNF765Q7L2R6 523 aa15.56■□□□□ 0.08
PCDHA1-201ENST00000378133 UBE3DQ7Z6J8 389 aa15.56■□□□□ 0.08
PCDHA1-201ENST00000378133 LUZP2Q86TE4 346 aa15.56■□□□□ 0.08
PCDHA1-201ENST00000378133 NUDT13Q86X67 352 aa15.56■□□□□ 0.08
PCDHA1-201ENST00000378133 OR6C4Q8NGE1 309 aa15.56■□□□□ 0.08
PCDHA1-201ENST00000378133 OTUB2Q96DC9 234 aa15.56■□□□□ 0.08
PCDHA1-201ENST00000378133 SORCS2Q96PQ0 1159 aa15.56■□□□□ 0.08
PCDHA1-201ENST00000378133 RNF32Q9H0A6 362 aa15.56■□□□□ 0.08
PCDHA1-201ENST00000378133 GLIPR2Q9H4G4 154 aa15.56■□□□□ 0.08
PCDHA1-201ENST00000378133 CHD7Q9P2D1 2997 aa15.56■□□□□ 0.08
PCDHA1-201ENST00000378133 CD8B2A6NJW9 211 aa15.56■□□□□ 0.08
PCDHA1-201ENST00000378133 PRKRAO75569 313 aaKnown RBP15.56■□□□□ 0.08
PCDHA1-201ENST00000378133 RB1P06400 928 aa15.56■□□□□ 0.08
PCDHA1-201ENST00000378133 CD8BP10966 210 aa15.56■□□□□ 0.08
PCDHA1-201ENST00000378133 ANXA3P12429 323 aa15.56■□□□□ 0.08
PCDHA1-201ENST00000378133 CFL1P23528 166 aaKnown RBP15.56■□□□□ 0.08
PCDHA1-201ENST00000378133 SLC6A11P48066 632 aa15.56■□□□□ 0.08
PCDHA1-201ENST00000378133 SMSP52788 366 aa15.56■□□□□ 0.08
PCDHA1-201ENST00000378133 CDK5Q00535 292 aa15.56■□□□□ 0.08
PCDHA1-201ENST00000378133 IKZF1Q13422 519 aa15.56■□□□□ 0.08
PCDHA1-201ENST00000378133 GRK1Q15835 563 aa15.56■□□□□ 0.08
PCDHA1-201ENST00000378133 AANATQ16613 207 aa15.56■□□□□ 0.08
PCDHA1-201ENST00000378133 ARIH2OSQ8N7S6 290 aa15.56■□□□□ 0.08
PCDHA1-201ENST00000378133 LINC00469Q8N7U9 141 aa15.56■□□□□ 0.08
PCDHA1-201ENST00000378133 OR5K2Q8NHB8 316 aa15.56■□□□□ 0.08
PCDHA1-201ENST00000378133 FGF11Q92914 225 aa15.56■□□□□ 0.08
PCDHA1-201ENST00000378133 RGMAQ96B86 450 aa15.56■□□□□ 0.08
PCDHA1-201ENST00000378133 SLC35G5Q96KT7 338 aa15.56■□□□□ 0.08
PCDHA1-201ENST00000378133 ZDHHC4Q9NPG8 344 aa15.56■□□□□ 0.08
PCDHA1-201ENST00000378133 MAN2C1Q9NTJ4 1040 aa15.56■□□□□ 0.08
PCDHA1-201ENST00000378133 ZCCHC3Q9NUD5 404 aaKnown RBP15.56■□□□□ 0.08
PCDHA1-201ENST00000378133 NUP210Q8TEM1 1887 aaPredicted RBP15.56■□□□□ 0.08
PCDHA1-201ENST00000378133 LTBP2Q14767 1821 aa15.55■□□□□ 0.08
PCDHA1-201ENST00000378133 ATP6V1G2-DDX39BF2Z307 99 aa15.55■□□□□ 0.08
PCDHA1-201ENST00000378133 NDUFS4O43181 175 aa15.55■□□□□ 0.08
PCDHA1-201ENST00000378133 EPPINO95925 133 aa15.55■□□□□ 0.08
PCDHA1-201ENST00000378133 ALPPL2P10696 532 aa15.55■□□□□ 0.08
PCDHA1-201ENST00000378133 GPR139Q6DWJ6 353 aa15.55■□□□□ 0.08
PCDHA1-201ENST00000378133 SLC36A4Q6YBV0 504 aa15.55■□□□□ 0.08
PCDHA1-201ENST00000378133 PLEKHM3Q6ZWE6 761 aa15.55■□□□□ 0.08
PCDHA1-201ENST00000378133 ADCK2Q7Z695 626 aa15.55■□□□□ 0.08
PCDHA1-201ENST00000378133 SFTPA1Q8IWL2 248 aa15.55■□□□□ 0.08
PCDHA1-201ENST00000378133 OR8D1Q8WZ84 308 aa15.55■□□□□ 0.08
PCDHA1-201ENST00000378133 SMG7Q92540 1137 aaKnown RBP15.55■□□□□ 0.08
PCDHA1-201ENST00000378133 CHFRQ96EP1 664 aa15.55■□□□□ 0.08
PCDHA1-201ENST00000378133 LGR4Q9BXB1 951 aa15.55■□□□□ 0.08
PCDHA1-201ENST00000378133 CLEC4MQ9H2X3 399 aaPredicted RBP15.55■□□□□ 0.08
PCDHA1-201ENST00000378133 GHITMQ9H3K2 345 aa15.55■□□□□ 0.08
PCDHA1-201ENST00000378133 PELI2Q9HAT8 420 aa15.55■□□□□ 0.08
PCDHA1-201ENST00000378133 NUDT15Q9NV35 164 aa15.55■□□□□ 0.08
PCDHA1-201ENST00000378133 CDH23Q9H251 3354 aa15.55■□□□□ 0.08
PCDHA1-201ENST00000378133 FGF19O95750 216 aa15.55■□□□□ 0.08
PCDHA1-201ENST00000378133 IFNA7P01567 189 aa15.55■□□□□ 0.08
PCDHA1-201ENST00000378133 DSG2Q14126 1118 aa15.55■□□□□ 0.08
PCDHA1-201ENST00000378133 IDNKQ5T6J7 187 aa15.55■□□□□ 0.08
PCDHA1-201ENST00000378133 FAM122CQ6P4D5 195 aa15.55■□□□□ 0.08
PCDHA1-201ENST00000378133 RFT1Q96AA3 541 aa15.55■□□□□ 0.08
PCDHA1-201ENST00000378133 DPH7Q9BTV6 452 aa15.55■□□□□ 0.08
PCDHA1-201ENST00000378133 PLA2G12AQ9BZM1 189 aa15.55■□□□□ 0.08
PCDHA1-201ENST00000378133 WASH6PQ9NQA3 447 aa15.55■□□□□ 0.08
PCDHA1-201ENST00000378133 SLCO1C1Q9NYB5 712 aa15.55■□□□□ 0.08
PCDHA1-201ENST00000378133 A8MUA0 341 aa15.54■□□□□ 0.08
PCDHA1-201ENST00000378133 ERGP11308 486 aa15.54■□□□□ 0.08
PCDHA1-201ENST00000378133 CEBPBP17676 345 aa15.54■□□□□ 0.08
PCDHA1-201ENST00000378133 PPP2R1BP30154 601 aa15.54■□□□□ 0.08
PCDHA1-201ENST00000378133 BUD31P41223 144 aaPredicted RBP15.54■□□□□ 0.08
PCDHA1-201ENST00000378133 VASPP50552 380 aaPredicted RBP15.54■□□□□ 0.08
PCDHA1-201ENST00000378133 EXOSC2Q13868 293 aaKnown RBP15.54■□□□□ 0.08
PCDHA1-201ENST00000378133 NDUFAF5Q5TEU4 345 aa15.54■□□□□ 0.08
PCDHA1-201ENST00000378133 CD300LDQ6UXZ3 194 aa15.54■□□□□ 0.08
PCDHA1-201ENST00000378133 KRT74Q7RTS7 529 aa15.54■□□□□ 0.08
PCDHA1-201ENST00000378133 ADGRD2Q7Z7M1 963 aa15.54■□□□□ 0.08
PCDHA1-201ENST00000378133 MRPL43Q8N983 215 aaKnown RBP15.54■□□□□ 0.08
PCDHA1-201ENST00000378133 SCMH1Q96GD3 660 aa15.54■□□□□ 0.08
PCDHA1-201ENST00000378133 AMDHD1Q96NU7 426 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms