RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 SH2D4BQ5SQS7 431 aa20.91■□□□□ 0.94
C9orf47-202ENST00000375850 OR2L13Q8N349 312 aa20.91■□□□□ 0.94
C9orf47-202ENST00000375850 METTL25Q8N6Q8 603 aa20.91■□□□□ 0.94
C9orf47-202ENST00000375850 ACMSDQ8TDX5 336 aa20.91■□□□□ 0.94
C9orf47-202ENST00000375850 CCDC126Q96EE4 140 aa20.91■□□□□ 0.94
C9orf47-202ENST00000375850 ARSGQ96EG1 525 aa20.91■□□□□ 0.94
C9orf47-202ENST00000375850 C1GALT1C1Q96EU7 318 aa20.91■□□□□ 0.94
C9orf47-202ENST00000375850 PIK3IP1Q96FE7 263 aa20.91■□□□□ 0.94
C9orf47-202ENST00000375850 CCL19Q99731 98 aa20.91■□□□□ 0.94
C9orf47-202ENST00000375850 OPN3Q9H1Y3 402 aaPredicted RBP20.91■□□□□ 0.94
C9orf47-202ENST00000375850 FANCFQ9NPI8 374 aa20.91■□□□□ 0.94
C9orf47-202ENST00000375850 DDX18Q9NVP1 670 aaKnown RBP20.91■□□□□ 0.94
C9orf47-202ENST00000375850 PAQR5Q9NXK6 330 aaPredicted RBP20.91■□□□□ 0.94
C9orf47-202ENST00000375850 DMGDHQ9UI17 866 aaKnown RBP20.91■□□□□ 0.94
C9orf47-202ENST00000375850 PROCRQ9UNN8 238 aa20.91■□□□□ 0.94
C9orf47-202ENST00000375850 ZNF337Q9Y3M9 751 aa20.91■□□□□ 0.94
C9orf47-202ENST00000375850 OR2M5A3KFT3 312 aa20.9■□□□□ 0.94
C9orf47-202ENST00000375850 NME6O75414 186 aaPredicted RBP20.9■□□□□ 0.94
C9orf47-202ENST00000375850 PSMG1O95456 288 aa20.9■□□□□ 0.94
C9orf47-202ENST00000375850 CGAP01215 116 aa20.9■□□□□ 0.94
C9orf47-202ENST00000375850 GSTA1P08263 222 aa20.9■□□□□ 0.94
C9orf47-202ENST00000375850 PPP3CBP16298 524 aa20.9■□□□□ 0.94
C9orf47-202ENST00000375850 HTR6P50406 440 aa20.9■□□□□ 0.94
C9orf47-202ENST00000375850 CLDN15P56746 228 aa20.9■□□□□ 0.94
C9orf47-202ENST00000375850 C17orf67Q0P5P2 114 aa20.9■□□□□ 0.94
C9orf47-202ENST00000375850 C2orf80Q0P641 193 aa20.9■□□□□ 0.94
C9orf47-202ENST00000375850 SPDYAQ5MJ70 313 aa20.9■□□□□ 0.94
C9orf47-202ENST00000375850 IKBIPQ70UQ0 350 aa20.9■□□□□ 0.94
C9orf47-202ENST00000375850 FAM214BQ7L5A3 538 aa20.9■□□□□ 0.94
C9orf47-202ENST00000375850 MNS1Q8NEH6 495 aa20.9■□□□□ 0.94
C9orf47-202ENST00000375850 EBPLQ9BY08 206 aa20.9■□□□□ 0.94
C9orf47-202ENST00000375850 MYNNQ9NPC7 610 aa20.9■□□□□ 0.94
C9orf47-202ENST00000375850 MED11Q9P086 117 aa20.9■□□□□ 0.94
C9orf47-202ENST00000375850 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.9■□□□□ 0.94
C9orf47-202ENST00000375850 MED12LQ86YW9 2145 aa20.9■□□□□ 0.94
C9orf47-202ENST00000375850 IGLV3-32A0A0A0MS00 114 aa20.89■□□□□ 0.93
C9orf47-202ENST00000375850 SIAH2O43255 324 aa20.89■□□□□ 0.93
C9orf47-202ENST00000375850 SEC14L5O43304 696 aa20.89■□□□□ 0.93
C9orf47-202ENST00000375850 TMCC2O75069 709 aa20.89■□□□□ 0.93
C9orf47-202ENST00000375850 URI1O94763 535 aaPredicted RBP20.89■□□□□ 0.93
C9orf47-202ENST00000375850 JUNP05412 331 aaKnown RBP20.89■□□□□ 0.93
C9orf47-202ENST00000375850 CTAGE8P0CG41 777 aa20.89■□□□□ 0.93
C9orf47-202ENST00000375850 SUCLG1P53597 346 aaKnown RBP20.89■□□□□ 0.93
C9orf47-202ENST00000375850 SIRPAP78324 504 aa20.89■□□□□ 0.93
C9orf47-202ENST00000375850 PON3Q15166 354 aa20.89■□□□□ 0.93
C9orf47-202ENST00000375850 GUSBP1Q15486 140 aa20.89■□□□□ 0.93
C9orf47-202ENST00000375850 CTAGE4Q8IX94 777 aa20.89■□□□□ 0.93
C9orf47-202ENST00000375850 FNDC9Q8TBE3 224 aa20.89■□□□□ 0.93
C9orf47-202ENST00000375850 DUSP19Q8WTR2 217 aa20.89■□□□□ 0.93
C9orf47-202ENST00000375850 METTL2AQ96IZ6 378 aaKnown RBP20.89■□□□□ 0.93
C9orf47-202ENST00000375850 LMF2Q9BU23 707 aaKnown RBP20.89■□□□□ 0.93
C9orf47-202ENST00000375850 TBL1XR1Q9BZK7 514 aa20.89■□□□□ 0.93
C9orf47-202ENST00000375850 UBTD1Q9HAC8 227 aa20.89■□□□□ 0.93
C9orf47-202ENST00000375850 H3BML4 177 aa20.88■□□□□ 0.93
C9orf47-202ENST00000375850 UPK1AO00322 258 aa20.88■□□□□ 0.93
C9orf47-202ENST00000375850 TBXA2RP21731 343 aa20.88■□□□□ 0.93
C9orf47-202ENST00000375850 ECHS1P30084 290 aa20.88■□□□□ 0.93
C9orf47-202ENST00000375850 CCKARP32238 428 aa20.88■□□□□ 0.93
C9orf47-202ENST00000375850 BTKQ06187 659 aa20.88■□□□□ 0.93
C9orf47-202ENST00000375850 STX5Q13190 355 aa20.88■□□□□ 0.93
C9orf47-202ENST00000375850 SGCBQ16585 318 aa20.88■□□□□ 0.93
C9orf47-202ENST00000375850 IMPG1Q17R60 797 aa20.88■□□□□ 0.93
C9orf47-202ENST00000375850 FAM71E1Q6IPT2 247 aa20.88■□□□□ 0.93
C9orf47-202ENST00000375850 TMEM107Q6UX40 140 aa20.88■□□□□ 0.93
C9orf47-202ENST00000375850 Q71RC1 249 aaPredicted RBP20.88■□□□□ 0.93
C9orf47-202ENST00000375850 C17orf53Q8N3J3 647 aaPredicted RBP20.88■□□□□ 0.93
C9orf47-202ENST00000375850 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.88■□□□□ 0.93
C9orf47-202ENST00000375850 MARK4Q96L34 752 aa20.88■□□□□ 0.93
C9orf47-202ENST00000375850 IQCGQ9H095 443 aaKnown RBP20.88■□□□□ 0.93
C9orf47-202ENST00000375850 EMC9Q9Y3B6 208 aa20.88■□□□□ 0.93
C9orf47-202ENST00000375850 TIMM22Q9Y584 194 aa20.88■□□□□ 0.93
C9orf47-202ENST00000375850 NSD1Q96L73 2696 aaPredicted RBP20.88■□□□□ 0.93
C9orf47-202ENST00000375850 UQCRHLA0A096LP55 91 aa20.87■□□□□ 0.93
C9orf47-202ENST00000375850 KCNH1O95259 989 aa20.87■□□□□ 0.93
C9orf47-202ENST00000375850 ZNF17P17021 662 aa20.87■□□□□ 0.93
C9orf47-202ENST00000375850 PRR5P85299 388 aa20.87■□□□□ 0.93
C9orf47-202ENST00000375850 VPS26BQ4G0F5 336 aa20.87■□□□□ 0.93
C9orf47-202ENST00000375850 TRMT10CQ7L0Y3 403 aaKnown RBP20.87■□□□□ 0.93
C9orf47-202ENST00000375850 YTHDF3Q7Z739 585 aaKnown RBP20.87■□□□□ 0.93
C9orf47-202ENST00000375850 OR6K3Q8NGY3 331 aa20.87■□□□□ 0.93
C9orf47-202ENST00000375850 CDC26Q8NHZ8 85 aa20.87■□□□□ 0.93
C9orf47-202ENST00000375850 NUDT8Q8WV74 236 aa20.87■□□□□ 0.93
C9orf47-202ENST00000375850 ELP4Q96EB1 424 aa20.87■□□□□ 0.93
C9orf47-202ENST00000375850 Q96MF0 132 aa20.87■□□□□ 0.93
C9orf47-202ENST00000375850 AMDHD1Q96NU7 426 aa20.87■□□□□ 0.93
C9orf47-202ENST00000375850 GSX2Q9BZM3 304 aa20.87■□□□□ 0.93
C9orf47-202ENST00000375850 GLIPR2Q9H4G4 154 aa20.87■□□□□ 0.93
C9orf47-202ENST00000375850 MID1IP1Q9NPA3 183 aa20.87■□□□□ 0.93
C9orf47-202ENST00000375850 VPS13CQ709C8 3753 aa20.86■□□□□ 0.93
C9orf47-202ENST00000375850 A0A087WZY1 265 aa20.86■□□□□ 0.93
C9orf47-202ENST00000375850 RSL1D1O76021 490 aaKnown RBP20.86■□□□□ 0.93
C9orf47-202ENST00000375850 LY6G6DO95868 133 aa20.86■□□□□ 0.93
C9orf47-202ENST00000375850 CLDN20P56880 219 aa20.86■□□□□ 0.93
C9orf47-202ENST00000375850 BEX5Q5H9J7 111 aa20.86■□□□□ 0.93
C9orf47-202ENST00000375850 TRIM46Q7Z4K8 759 aa20.86■□□□□ 0.93
C9orf47-202ENST00000375850 MARCH3Q86UD3 253 aa20.86■□□□□ 0.93
C9orf47-202ENST00000375850 ZNF610Q8N9Z0 462 aa20.86■□□□□ 0.93
C9orf47-202ENST00000375850 GMPPAQ96IJ6 420 aaPredicted RBP20.86■□□□□ 0.93
C9orf47-202ENST00000375850 KCNA7Q96RP8 456 aa20.86■□□□□ 0.93
C9orf47-202ENST00000375850 GSTO2Q9H4Y5 243 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms