RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 METAP1DQ6UB28 335 aaPredicted RBP13.61□□□□□ -0.23
MSH5-201ENST00000375703 GDF7Q7Z4P5 450 aa13.61□□□□□ -0.23
MSH5-201ENST00000375703 OTULINQ96BN8 352 aa13.61□□□□□ -0.23
MSH5-201ENST00000375703 RNF31Q96EP0 1072 aa13.61□□□□□ -0.23
MSH5-201ENST00000375703 CHFRQ96EP1 664 aa13.61□□□□□ -0.23
MSH5-201ENST00000375703 ASB16Q96NS5 453 aa13.61□□□□□ -0.23
MSH5-201ENST00000375703 PLSCR3Q9NRY6 295 aa13.61□□□□□ -0.23
MSH5-201ENST00000375703 MED17Q9NVC6 651 aa13.61□□□□□ -0.23
MSH5-201ENST00000375703 SPHK1Q9NYA1 384 aa13.61□□□□□ -0.23
MSH5-201ENST00000375703 NLGN3Q9NZ94 848 aa13.61□□□□□ -0.23
MSH5-201ENST00000375703 GPSM3Q9Y4H4 160 aa13.61□□□□□ -0.23
MSH5-201ENST00000375703 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.6□□□□□ -0.23
MSH5-201ENST00000375703 C2orf92A0A1B0GVN3 265 aa13.6□□□□□ -0.23
MSH5-201ENST00000375703 CD8B2A6NJW9 211 aa13.6□□□□□ -0.23
MSH5-201ENST00000375703 ZIC2O95409 532 aaPredicted RBP13.6□□□□□ -0.23
MSH5-201ENST00000375703 THY1P04216 161 aa13.6□□□□□ -0.23
MSH5-201ENST00000375703 ASGR2P07307 311 aa13.6□□□□□ -0.23
MSH5-201ENST00000375703 CD8BP10966 210 aa13.6□□□□□ -0.23
MSH5-201ENST00000375703 PSKH1P11801 424 aa13.6□□□□□ -0.23
MSH5-201ENST00000375703 HLA-DMAP28067 261 aa13.6□□□□□ -0.23
MSH5-201ENST00000375703 HTR1FP30939 366 aa13.6□□□□□ -0.23
MSH5-201ENST00000375703 MLLT3P42568 568 aaPredicted RBP13.6□□□□□ -0.23
MSH5-201ENST00000375703 ARFIP1P53367 373 aa13.6□□□□□ -0.23
MSH5-201ENST00000375703 ACSM1Q08AH1 577 aa13.6□□□□□ -0.23
MSH5-201ENST00000375703 PGGHGQ32M88 737 aa13.6□□□□□ -0.23
MSH5-201ENST00000375703 MBOAT2Q6ZWT7 520 aa13.6□□□□□ -0.23
MSH5-201ENST00000375703 KLBQ86Z14 1044 aa13.6□□□□□ -0.23
MSH5-201ENST00000375703 HDDC3Q8N4P3 179 aa13.6□□□□□ -0.23
MSH5-201ENST00000375703 SIMC1Q8NDZ2 872 aa13.6□□□□□ -0.23
MSH5-201ENST00000375703 TMEM255BQ8WV15 326 aa13.6□□□□□ -0.23
MSH5-201ENST00000375703 COL26A1Q96A83 441 aa13.6□□□□□ -0.23
MSH5-201ENST00000375703 GIMAP5Q96F15 307 aa13.6□□□□□ -0.23
MSH5-201ENST00000375703 RNF170Q96K19 258 aa13.6□□□□□ -0.23
MSH5-201ENST00000375703 ZNF649Q9BS31 505 aa13.6□□□□□ -0.23
MSH5-201ENST00000375703 TIMM29Q9BSF4 260 aa13.6□□□□□ -0.23
MSH5-201ENST00000375703 TNFRSF10DQ9UBN6 386 aa13.6□□□□□ -0.23
MSH5-201ENST00000375703 CBLCQ9ULV8 474 aa13.6□□□□□ -0.23
MSH5-201ENST00000375703 SHISA3A0PJX4 238 aa13.6□□□□□ -0.23
MSH5-201ENST00000375703 DUXAA6NLW8 204 aa13.6□□□□□ -0.23
MSH5-201ENST00000375703 PIP5K1CO60331 668 aa13.6□□□□□ -0.23
MSH5-201ENST00000375703 ERVK-21P61565 698 aa13.6□□□□□ -0.23
MSH5-201ENST00000375703 FGL2Q14314 439 aa13.6□□□□□ -0.23
MSH5-201ENST00000375703 PDGFRLQ15198 375 aa13.6□□□□□ -0.23
MSH5-201ENST00000375703 CST6Q15828 149 aa13.6□□□□□ -0.23
MSH5-201ENST00000375703 MTSS1LQ765P7 747 aa13.6□□□□□ -0.23
MSH5-201ENST00000375703 ZNF438Q7Z4V0 828 aa13.6□□□□□ -0.23
MSH5-201ENST00000375703 CPOQ8IVL8 374 aa13.6□□□□□ -0.23
MSH5-201ENST00000375703 SLC16A11Q8NCK7 471 aa13.6□□□□□ -0.23
MSH5-201ENST00000375703 OR52N1Q8NH53 320 aa13.6□□□□□ -0.23
MSH5-201ENST00000375703 SMARCD2Q92925 531 aa13.6□□□□□ -0.23
MSH5-201ENST00000375703 SENP5Q96HI0 755 aaPredicted RBP13.6□□□□□ -0.23
MSH5-201ENST00000375703 GDF15Q99988 308 aa13.6□□□□□ -0.23
MSH5-201ENST00000375703 C6orf106Q9H6K1 298 aaPredicted RBP13.6□□□□□ -0.23
MSH5-201ENST00000375703 MTHFD2LQ9H903 347 aaPredicted RBP13.6□□□□□ -0.23
MSH5-201ENST00000375703 SYNPO2LQ9H987 977 aa13.6□□□□□ -0.23
MSH5-201ENST00000375703 RBFOX1Q9NWB1 397 aaKnown RBP13.6□□□□□ -0.23
MSH5-201ENST00000375703 SERGEFQ9UGK8 458 aa13.6□□□□□ -0.23
MSH5-201ENST00000375703 TRPM6Q9BX84 2022 aa13.59□□□□□ -0.23
MSH5-201ENST00000375703 GSAPA4D1B5 854 aa13.59□□□□□ -0.23
MSH5-201ENST00000375703 PRR23AA6NEV1 266 aa13.59□□□□□ -0.23
MSH5-201ENST00000375703 IGHA1P01876 353 aa13.59□□□□□ -0.23
MSH5-201ENST00000375703 HLA-DQB1P01920 261 aa13.59□□□□□ -0.23
MSH5-201ENST00000375703 HMGN1P05114 100 aa13.59□□□□□ -0.23
MSH5-201ENST00000375703 GAAP10253 952 aa13.59□□□□□ -0.23
MSH5-201ENST00000375703 PRKAR1AP10644 381 aa13.59□□□□□ -0.23
MSH5-201ENST00000375703 CMPK1P30085 196 aa13.59□□□□□ -0.23
MSH5-201ENST00000375703 TSFMP43897 325 aaKnown RBP13.59□□□□□ -0.23
MSH5-201ENST00000375703 STXBP1P61764 594 aaKnown RBP13.59□□□□□ -0.23
MSH5-201ENST00000375703 CEBPEQ15744 281 aa13.59□□□□□ -0.23
MSH5-201ENST00000375703 ZNF620Q6ZNG0 422 aa13.59□□□□□ -0.23
MSH5-201ENST00000375703 ABI3BPQ7Z7G0 1075 aa13.59□□□□□ -0.23
MSH5-201ENST00000375703 NRROSQ86YC3 692 aa13.59□□□□□ -0.23
MSH5-201ENST00000375703 MFSD9Q8NBP5 474 aa13.59□□□□□ -0.23
MSH5-201ENST00000375703 OR2T33Q8NG76 320 aa13.59□□□□□ -0.23
MSH5-201ENST00000375703 DNAJA4Q8WW22 397 aaPredicted RBP13.59□□□□□ -0.23
MSH5-201ENST00000375703 SAMD8Q96LT4 415 aa13.59□□□□□ -0.23
MSH5-201ENST00000375703 C11orf49Q9H6J7 331 aa13.59□□□□□ -0.23
MSH5-201ENST00000375703 ASB6Q9NWX5 421 aa13.59□□□□□ -0.23
MSH5-201ENST00000375703 ZFR2Q9UPR6 939 aaKnown RBP13.59□□□□□ -0.23
MSH5-201ENST00000375703 FAM240BA0A1B0GVZ2 78 aa13.59□□□□□ -0.23
MSH5-201ENST00000375703 A0A1W2PP55 124 aa13.59□□□□□ -0.23
MSH5-201ENST00000375703 ISM1B1AKI9 464 aa13.59□□□□□ -0.23
MSH5-201ENST00000375703 SOCS6O14544 535 aa13.59□□□□□ -0.23
MSH5-201ENST00000375703 SCAMP1O15126 338 aa13.59□□□□□ -0.23
MSH5-201ENST00000375703 KLF4O43474 513 aa13.59□□□□□ -0.23
MSH5-201ENST00000375703 SCO2O43819 266 aa13.59□□□□□ -0.23
MSH5-201ENST00000375703 OR5F1O95221 314 aa13.59□□□□□ -0.23
MSH5-201ENST00000375703 CEACAM5P06731 702 aa13.59□□□□□ -0.23
MSH5-201ENST00000375703 NDUFV2P19404 249 aa13.59□□□□□ -0.23
MSH5-201ENST00000375703 PTNP21246 168 aa13.59□□□□□ -0.23
MSH5-201ENST00000375703 PEBP1P30086 187 aaKnown RBP13.59□□□□□ -0.23
MSH5-201ENST00000375703 AGERQ15109 404 aa13.59□□□□□ -0.23
MSH5-201ENST00000375703 TATDN3Q17R31 274 aa13.59□□□□□ -0.23
MSH5-201ENST00000375703 FAM214AQ32MH5 1076 aa13.59□□□□□ -0.23
MSH5-201ENST00000375703 PUS10Q3MIT2 529 aaKnown RBP13.59□□□□□ -0.23
MSH5-201ENST00000375703 ZNF322Q6U7Q0 402 aaPredicted RBP13.59□□□□□ -0.23
MSH5-201ENST00000375703 PAMR1Q6UXH9 720 aa13.59□□□□□ -0.23
MSH5-201ENST00000375703 GLCCI1Q86VQ1 547 aa13.59□□□□□ -0.23
MSH5-201ENST00000375703 SP7Q8TDD2 431 aaPredicted RBP13.59□□□□□ -0.23
MSH5-201ENST00000375703 JPH3Q8WXH2 748 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms