RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 KCNK15Q9H427 330 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 PIGVQ9NUD9 493 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 PLXNB1O43157 2135 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 TRAV34A0A0B4J273 112 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 USP17L13C9JLJ4 530 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 SEC24BO95487 1268 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 TYMSP04818 313 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 ACSM4P0C7M7 580 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 IRF1P10914 325 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 NME1P15531 152 aaKnown RBP5.68□□□□□ -1.5
SCN2A-202ENST00000375427 MPGP29372 298 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 RBP5P82980 135 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 FAM171A1Q5VUB5 890 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 ADAMTSL2Q86TH1 951 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 OR5H6Q8NGV6 325 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 AENQ8WTP8 325 aaKnown RBP5.68□□□□□ -1.5
SCN2A-202ENST00000375427 TMEM239Q8WW34 195 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 ST8SIA2Q92186 375 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 MXRA8Q9BRK3 442 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 TIGARQ9NQ88 270 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 C1GALT1Q9NS00 363 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 OR6C3Q9NZP0 311 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 B4GALT6Q9UBX8 382 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 PCDHA3Q9Y5H8 950 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 CASP8AP2Q9UKL3 1982 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 NCOA2Q15596 1464 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 AQP7P3A6NL99 342 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 TYRP14679 529 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 ZNF43P17038 809 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 ARRB2P32121 409 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 IDH3AP50213 366 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 RPL11P62913 178 aaKnown RBP5.67□□□□□ -1.5
SCN2A-202ENST00000375427 PMS2P3Q13401 168 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 POU6F1Q14863 301 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 SLC15A3Q8IY34 581 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 DCP1BQ8IZD4 617 aaKnown RBP5.67□□□□□ -1.5
SCN2A-202ENST00000375427 ACTRT1Q8TDG2 376 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 SOX7Q9BT81 388 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 MAP3K1Q13233 1512 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 ADCY9O60503 1353 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 WNK2Q9Y3S1 2297 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 ZC3H12DA2A288 527 aaKnown RBP5.67□□□□□ -1.5
SCN2A-202ENST00000375427 UPP2O95045 317 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 GJB6O95452 261 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 C22orf31O95567 290 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 SEMA4FO95754 770 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 OPN1MWP04001 364 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 OPN1MW2P0DN77 364 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 OPN1MW3P0DN78 364 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 GRPRP30550 384 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 RHOAP61586 193 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 MEF2DQ14814 521 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 ACOT6Q3I5F7 207 aaPredicted RBP5.67□□□□□ -1.5
SCN2A-202ENST00000375427 CRB2Q5IJ48 1285 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 TMEM71Q6P5X7 295 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 SLC7A5P1Q8MH63 180 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 ZNF454Q8N9F8 522 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 LPGAT1Q92604 370 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 MAP3K3Q99759 626 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.67□□□□□ -1.5
SCN2A-202ENST00000375427 SLC1A7O00341 560 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 EDF1O60869 148 aaKnown RBP5.67□□□□□ -1.5
SCN2A-202ENST00000375427 ACTL6AO96019 429 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 ALDH2P05091 517 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 TMIGD3P0DMS9 266 aaPredicted RBP5.67□□□□□ -1.5
SCN2A-202ENST00000375427 NDST2P52849 883 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 SUCLG1P53597 346 aaKnown RBP5.67□□□□□ -1.5
SCN2A-202ENST00000375427 RPL38P63173 70 aaKnown RBP5.67□□□□□ -1.5
SCN2A-202ENST00000375427 BLOC1S3Q6QNY0 202 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 SLC36A1Q7Z2H8 476 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 KMT5CQ86Y97 462 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 C4orf19Q8IY42 314 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 NDNFQ8TB73 568 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 CREB3L4Q8TEY5 395 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 SLC13A3Q8WWT9 602 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 MIB2Q96AX9 1013 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 TMEM59Q9BXS4 323 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 CACNG6Q9BXT2 260 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 POLR2J3Q9H1A7 115 aaKnown RBP5.67□□□□□ -1.5
SCN2A-202ENST00000375427 PGPEP1Q9NXJ5 209 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 SYNJ2O15056 1496 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 TCP10L2B9ZVM9 353 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 PLPP1O14494 284 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 SPATA31D3P0C874 917 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 HGFP14210 728 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 CXCR1P25024 350 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 LTKP29376 864 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 NPRL3Q12980 569 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 HNRNPA0Q13151 305 aaKnown RBP5.67□□□□□ -1.5
SCN2A-202ENST00000375427 TMEM184AQ6ZMB5 413 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 OR2T33Q8NG76 320 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 OR2G2Q8NGZ5 317 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 ARNTL2Q8WYA1 636 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 TMEM9BQ9NQ34 198 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 FBXO5Q9UKT4 447 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 H7C4K7 107 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 OR7C2O60412 319 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 NDST3O95803 873 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 ADH4P08319 380 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 FOLR1P15328 257 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms