RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 C8orf74Q6P047 294 aa12.4□□□□□ -0.42
CXCL12-202ENST00000374426 GALNT18Q6P9A2 607 aa12.4□□□□□ -0.42
CXCL12-202ENST00000374426 GPRIN3Q6ZVF9 776 aa12.4□□□□□ -0.42
CXCL12-202ENST00000374426 UHMK1Q8TAS1 419 aaKnown RBP12.4□□□□□ -0.42
CXCL12-202ENST00000374426 METTL6Q8TCB7 284 aa12.4□□□□□ -0.42
CXCL12-202ENST00000374426 DCAKDQ8WVC6 231 aa12.4□□□□□ -0.42
CXCL12-202ENST00000374426 CAVIN3Q969G5 261 aa12.4□□□□□ -0.42
CXCL12-202ENST00000374426 C1GALT1C1Q96EU7 318 aa12.4□□□□□ -0.42
CXCL12-202ENST00000374426 DMGDHQ9UI17 866 aaKnown RBP12.4□□□□□ -0.42
CXCL12-202ENST00000374426 ZNF180Q9UJW8 692 aa12.4□□□□□ -0.42
CXCL12-202ENST00000374426 ABCG2Q9UNQ0 655 aa12.4□□□□□ -0.42
CXCL12-202ENST00000374426 A0A087WV62 115 aa12.39□□□□□ -0.43
CXCL12-202ENST00000374426 MYO1GB0I1T2 1018 aa12.39□□□□□ -0.43
CXCL12-202ENST00000374426 INAFM1C9JVW0 142 aa12.39□□□□□ -0.43
CXCL12-202ENST00000374426 COQ9O75208 318 aa12.39□□□□□ -0.43
CXCL12-202ENST00000374426 PSMG1O95456 288 aa12.39□□□□□ -0.43
CXCL12-202ENST00000374426 THBDP07204 575 aa12.39□□□□□ -0.43
CXCL12-202ENST00000374426 TBXA2RP21731 343 aa12.39□□□□□ -0.43
CXCL12-202ENST00000374426 PTH2RP49190 550 aa12.39□□□□□ -0.43
CXCL12-202ENST00000374426 ETF1P62495 437 aaKnown RBP12.39□□□□□ -0.43
CXCL12-202ENST00000374426 TEX35Q5T0J7 233 aa12.39□□□□□ -0.43
CXCL12-202ENST00000374426 SYT10Q6XYQ8 523 aa12.39□□□□□ -0.43
CXCL12-202ENST00000374426 FAM214BQ7L5A3 538 aa12.39□□□□□ -0.43
CXCL12-202ENST00000374426 MARCH3Q86UD3 253 aa12.39□□□□□ -0.43
CXCL12-202ENST00000374426 METTL25Q8N6Q8 603 aa12.39□□□□□ -0.43
CXCL12-202ENST00000374426 DUSP19Q8WTR2 217 aa12.39□□□□□ -0.43
CXCL12-202ENST00000374426 TMEM237Q96Q45 408 aa12.39□□□□□ -0.43
CXCL12-202ENST00000374426 BBS4Q96RK4 519 aa12.39□□□□□ -0.43
CXCL12-202ENST00000374426 EBPLQ9BY08 206 aa12.39□□□□□ -0.43
CXCL12-202ENST00000374426 KLHL4Q9C0H6 718 aa12.39□□□□□ -0.43
CXCL12-202ENST00000374426 PTGES2Q9H7Z7 377 aa12.39□□□□□ -0.43
CXCL12-202ENST00000374426 SDHAF3Q9NRP4 125 aa12.39□□□□□ -0.43
CXCL12-202ENST00000374426 FAM120CQ9NX05 1096 aaKnown RBP12.39□□□□□ -0.43
CXCL12-202ENST00000374426 PROCRQ9UNN8 238 aa12.39□□□□□ -0.43
CXCL12-202ENST00000374426 C19orf53Q9UNZ5 99 aaPredicted RBP12.39□□□□□ -0.43
CXCL12-202ENST00000374426 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.38□□□□□ -0.43
CXCL12-202ENST00000374426 POC1B-GALNT4F8VUJ3 575 aa12.38□□□□□ -0.43
CXCL12-202ENST00000374426 UPK1AO00322 258 aa12.38□□□□□ -0.43
CXCL12-202ENST00000374426 KLF4O43474 513 aa12.38□□□□□ -0.43
CXCL12-202ENST00000374426 DLX3O60479 287 aa12.38□□□□□ -0.43
CXCL12-202ENST00000374426 CNOT4O95628 575 aaKnown RBP12.38□□□□□ -0.43
CXCL12-202ENST00000374426 JUNP05412 331 aaKnown RBP12.38□□□□□ -0.43
CXCL12-202ENST00000374426 ANXA4P09525 319 aaPredicted RBP12.38□□□□□ -0.43
CXCL12-202ENST00000374426 DDCP20711 480 aa12.38□□□□□ -0.43
CXCL12-202ENST00000374426 HMOX2P30519 316 aa12.38□□□□□ -0.43
CXCL12-202ENST00000374426 NCBP2P52298 156 aaKnown RBP eCLIP12.38□□□□□ -0.43
CXCL12-202ENST00000374426 OCRLQ01968 901 aa12.38□□□□□ -0.43
CXCL12-202ENST00000374426 DECR1Q16698 335 aa12.38□□□□□ -0.43
CXCL12-202ENST00000374426 EXOC3L2Q2M3D2 409 aa12.38□□□□□ -0.43
CXCL12-202ENST00000374426 TMEM44Q2T9K0 475 aa12.38□□□□□ -0.43
CXCL12-202ENST00000374426 TMEM107Q6UX40 140 aa12.38□□□□□ -0.43
CXCL12-202ENST00000374426 PLEKHM3Q6ZWE6 761 aa12.38□□□□□ -0.43
CXCL12-202ENST00000374426 GGNQ86UU5 652 aa12.38□□□□□ -0.43
CXCL12-202ENST00000374426 OR2L13Q8N349 312 aa12.38□□□□□ -0.43
CXCL12-202ENST00000374426 C17orf53Q8N3J3 647 aaPredicted RBP12.38□□□□□ -0.43
CXCL12-202ENST00000374426 KCNA7Q96RP8 456 aa12.38□□□□□ -0.43
CXCL12-202ENST00000374426 SHCBP1LQ9BZQ2 653 aa12.38□□□□□ -0.43
CXCL12-202ENST00000374426 SIRT5Q9NXA8 310 aa12.38□□□□□ -0.43
CXCL12-202ENST00000374426 TMEM216Q9P0N5 145 aa12.38□□□□□ -0.43
CXCL12-202ENST00000374426 ADAM21Q9UKJ8 722 aa12.38□□□□□ -0.43
CXCL12-202ENST00000374426 TIMM22Q9Y584 194 aa12.38□□□□□ -0.43
CXCL12-202ENST00000374426 IGLV3-32A0A0A0MS00 114 aa12.37□□□□□ -0.43
CXCL12-202ENST00000374426 SHISA8B8ZZ34 492 aa12.37□□□□□ -0.43
CXCL12-202ENST00000374426 IL33O95760 270 aa12.37□□□□□ -0.43
CXCL12-202ENST00000374426 FCGR2AP12318 317 aa12.37□□□□□ -0.43
CXCL12-202ENST00000374426 PAX1P15863 534 aa12.37□□□□□ -0.43
CXCL12-202ENST00000374426 TAC1P20366 129 aa12.37□□□□□ -0.43
CXCL12-202ENST00000374426 GSTM5P46439 218 aa12.37□□□□□ -0.43
CXCL12-202ENST00000374426 SLC6A8P48029 635 aa12.37□□□□□ -0.43
CXCL12-202ENST00000374426 RPS3AP61247 264 aaKnown RBP12.37□□□□□ -0.43
CXCL12-202ENST00000374426 PPP2R2BQ00005 443 aa12.37□□□□□ -0.43
CXCL12-202ENST00000374426 BTKQ06187 659 aa12.37□□□□□ -0.43
CXCL12-202ENST00000374426 ZNF763Q0D2J5 394 aa12.37□□□□□ -0.43
CXCL12-202ENST00000374426 GLYR1Q49A26 553 aaPredicted RBP12.37□□□□□ -0.43
CXCL12-202ENST00000374426 BEX5Q5H9J7 111 aa12.37□□□□□ -0.43
CXCL12-202ENST00000374426 APOOLQ6UXV4 268 aa12.37□□□□□ -0.43
CXCL12-202ENST00000374426 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.37□□□□□ -0.43
CXCL12-202ENST00000374426 GFM2Q969S9 779 aaKnown RBP12.37□□□□□ -0.43
CXCL12-202ENST00000374426 GLIPR2Q9H4G4 154 aa12.37□□□□□ -0.43
CXCL12-202ENST00000374426 Q9N2J8 555 aa12.37□□□□□ -0.43
CXCL12-202ENST00000374426 PLSCR4Q9NRQ2 329 aa12.37□□□□□ -0.43
CXCL12-202ENST00000374426 ZNF701Q9NV72 531 aaPredicted RBP12.37□□□□□ -0.43
CXCL12-202ENST00000374426 TAS2R7Q9NYW3 318 aa12.37□□□□□ -0.43
CXCL12-202ENST00000374426 NFU1Q9UMS0 254 aa12.37□□□□□ -0.43
CXCL12-202ENST00000374426 AP4B1Q9Y6B7 739 aa12.37□□□□□ -0.43
CXCL12-202ENST00000374426 GMFGO60234 142 aa12.36□□□□□ -0.43
CXCL12-202ENST00000374426 SLITRK5O94991 958 aa12.36□□□□□ -0.43
CXCL12-202ENST00000374426 UTS2O95399 124 aa12.36□□□□□ -0.43
CXCL12-202ENST00000374426 PLAUP00749 431 aa12.36□□□□□ -0.43
CXCL12-202ENST00000374426 ENO1P06733 434 aaKnown RBP12.36□□□□□ -0.43
CXCL12-202ENST00000374426 SNRPAP09012 282 aaKnown RBP12.36□□□□□ -0.43
CXCL12-202ENST00000374426 IMPDH1P20839 514 aa12.36□□□□□ -0.43
CXCL12-202ENST00000374426 RFX3P48380 749 aa12.36□□□□□ -0.43
CXCL12-202ENST00000374426 C2orf80Q0P641 193 aa12.36□□□□□ -0.43
CXCL12-202ENST00000374426 LCP2Q13094 533 aa12.36□□□□□ -0.43
CXCL12-202ENST00000374426 CAPRIN1Q14444 709 aaKnown RBP12.36□□□□□ -0.43
CXCL12-202ENST00000374426 SGCBQ16585 318 aa12.36□□□□□ -0.43
CXCL12-202ENST00000374426 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.36□□□□□ -0.43
CXCL12-202ENST00000374426 LGSNQ5TDP6 509 aa12.36□□□□□ -0.43
CXCL12-202ENST00000374426 FAM71E1Q6IPT2 247 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms