RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 EEF1A1P68104 462 aaKnown RBP8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 POU4F2Q12837 409 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 STX4Q12846 297 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 SQSTM1Q13501 440 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 PIN1Q13526 163 aaPredicted RBP8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 SPHARQ15513 63 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 TRAM1Q15629 374 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 ISXQ2M1V0 245 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 ZNF404Q494X3 552 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 MINDY4Q4G0A6 757 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 CYP27C1Q4G0S4 372 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 ARMCX4Q5H9R4 360 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 RPS26P11Q5JNZ5 115 aaPredicted RBP8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 DCST2Q5T1A1 773 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 TYW3Q6IPR3 259 aaKnown RBP8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 C16orf87Q6PH81 154 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 FRRS1Q6ZNA5 592 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 PLEKHM3Q6ZWE6 761 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 SLCO6A1Q86UG4 719 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 PLXDC1Q8IUK5 500 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 MCATQ8IVS2 390 aaKnown RBP8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 GALNT12Q8IXK2 581 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 AMER3Q8N944 861 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 ZNF527Q8NB42 609 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 PSD4Q8NDX1 1056 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 OR2T33Q8NG76 320 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 OR7G2Q8NG99 324 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 OR52L1Q8NGH7 329 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 OR5D16Q8NGK9 328 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 OR10G6Q8NH81 332 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 DNASE2BQ8WZ79 361 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 SLC41A3Q96GZ6 507 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 PLEKHA8Q96JA3 519 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 SPSB2Q99619 263 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 SLC38A3Q99624 504 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 MGLLQ99685 303 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 MCHR1Q99705 422 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 DCUN1D5Q9BTE7 237 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 NXF2Q9GZY0 626 aaKnown RBP8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 SLC6A17Q9H1V8 727 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 C12orf10Q9HB07 376 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 Q9N2J8 555 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 RLIMQ9NVW2 624 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 SELENONQ9NZV5 590 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 H2AFY2Q9P0M6 372 aaPredicted RBP8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 C5AR2Q9P296 337 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 KLHL3Q9UH77 587 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 GMEB2Q9UKD1 530 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 STUB1Q9UNE7 303 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 CYP8B1Q9UNU6 501 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 SLC35A3Q9Y2D2 325 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 CHD9Q3L8U1 2897 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 CDHR4A6H8M9 788 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 FAM86C2PA6NEL3 165 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 GLOD5A6NK44 160 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 SHISA7A6NL88 538 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 FAM170BA6NMN3 283 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 KDM4EB2RXH2 506 aaPredicted RBP8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 C4orf51C9J302 202 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 MYL12BO14950 172 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 KLF4O43474 513 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 IDH3BO43837 385 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 OR10H2O60403 315 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 MED26O95402 600 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 C1QCP02747 245 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 ADORA3P0DMS8 318 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 DBTP11182 482 aaKnown RBP8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 NT5EP21589 574 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 EPHA2P29317 976 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 GRK5P34947 590 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 ETV6P41212 452 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 SLC9A3P48764 834 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 GPR143P51810 404 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 BMXP51813 675 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 PPP5CP53041 499 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 LIMK1P53667 647 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 PRKCDQ05655 676 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 FUT5Q11128 374 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 GINS1Q14691 196 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 ZNF141Q15928 474 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 SNAPC1Q16533 368 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 ZNF181Q2M3W8 571 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 RGS21Q2M5E4 152 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 NXNL2Q5VZ03 156 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 CCDC81Q6ZN84 652 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 CCDC103Q8IW40 242 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 ARL14Q8N4G2 192 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 ARHGEF39Q8N4T4 335 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 NANOGP1Q8N7R0 232 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 SLC16A11Q8NCK7 471 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 VANGL1Q8TAA9 524 aaPredicted RBP8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 CHPT1Q8WUD6 406 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 DNAJA4Q8WW22 397 aaPredicted RBP8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 AP3S1Q92572 193 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 SLC9A6Q92581 669 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 RIT1Q92963 219 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 HLA-CQ95604 372 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 CLDN23Q96B33 292 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 C16orf58Q96GQ5 468 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms