RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 ACVR1CQ8NER5 493 aa10.92□□□□□ -0.66
VCL-202ENST00000372755 SFXN2Q96NB2 322 aa10.92□□□□□ -0.66
VCL-202ENST00000372755 EVA1AQ9H8M9 152 aa10.92□□□□□ -0.66
VCL-202ENST00000372755 NMNAT1Q9HAN9 279 aaPredicted RBP10.92□□□□□ -0.66
VCL-202ENST00000372755 EPHA1P21709 976 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 HNRNPA2B1P22626 353 aaKnown RBP10.91□□□□□ -0.66
VCL-202ENST00000372755 GK2Q14410 553 aaPredicted RBP10.91□□□□□ -0.66
VCL-202ENST00000372755 CNN3Q15417 329 aaKnown RBP10.91□□□□□ -0.66
VCL-202ENST00000372755 GDPGP1Q6ZNW5 385 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 COMMD7Q86VX2 200 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 ZNF610Q8N9Z0 462 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 TANKQ92844 425 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 FUBP1Q96AE4 644 aaKnown RBP10.91□□□□□ -0.66
VCL-202ENST00000372755 ALG8Q9BVK2 526 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 ALOXE3Q9BYJ1 711 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 NLKQ9UBE8 527 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 SLC6A5Q9Y345 797 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 C17orf113A0A1B0GUU1 675 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 CYB5BO43169 146 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 KNG1P01042 644 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 RPS2P15880 293 aaKnown RBP10.91□□□□□ -0.66
VCL-202ENST00000372755 ZNF136P52737 540 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 WNT4P56705 351 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 FXYD4P59646 89 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 MRPS10P82664 201 aaKnown RBP10.91□□□□□ -0.66
VCL-202ENST00000372755 ZNF551Q7Z340 670 aaPredicted RBP10.91□□□□□ -0.66
VCL-202ENST00000372755 KCTD20Q7Z5Y7 419 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 FNDC8Q8TC99 324 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 GPR148Q8TDV2 347 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 DCUN1D4Q92564 292 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 ARL5BQ96KC2 179 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 NUBP2Q9Y5Y2 271 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 D6RAR5 112 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 LYRM1O43325 122 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 PRAF2O60831 178 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 GPR32O75388 356 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 PENKP01210 267 aaPredicted RBP10.91□□□□□ -0.66
VCL-202ENST00000372755 RETP07949 1114 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 TFPTP0C1Z6 253 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 HOXA9P31269 272 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 KIAA1211LQ6NV74 962 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 LCTLQ6UWM7 567 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 OR13J1Q8NGT2 312 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 OR5W2Q8NH69 310 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 PCYT2Q99447 389 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 PITHD1Q9GZP4 211 aaPredicted RBP10.91□□□□□ -0.66
VCL-202ENST00000372755 GPR52Q9Y2T5 361 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 A0A1B0GV50 99 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 K7ERQ8 282 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 CASC3O15234 703 aaKnown RBP10.91□□□□□ -0.66
VCL-202ENST00000372755 CSF2RAP15509 400 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 SOX4Q06945 474 aaPredicted RBP10.91□□□□□ -0.66
VCL-202ENST00000372755 ANKRD54Q6NXT1 300 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 ZNF767PQ75MW2 155 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 OR5D16Q8NGK9 328 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 SORCS1Q8WY21 1168 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 OR10A5Q9H207 317 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 OR10A2Q9H208 303 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 ARGFXA6NJG6 315 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 C1orf196B1AJZ1 125 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 OR2T1O43869 369 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 EPHA4P54764 986 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 TOMM40LQ969M1 308 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 LIN37Q96GY3 246 aaPredicted RBP10.91□□□□□ -0.66
VCL-202ENST00000372755 DPH1Q9BZG8 443 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 SYNPO2LQ9H987 977 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 PLEKHJ1Q9NW61 149 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 MCTS1Q9ULC4 181 aaKnown RBP10.91□□□□□ -0.66
VCL-202ENST00000372755 GABRQQ9UN88 632 aa10.91□□□□□ -0.66
VCL-202ENST00000372755 CD300LBA8K4G0 201 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 SLC22A5O76082 557 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 CD63P08962 238 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 BMP2P12643 396 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 HTR2BP41595 481 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 HTR3AP46098 478 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 HSD17B7P56937 341 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 TMEM201Q5SNT2 666 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 NADSYN1Q6IA69 706 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 RTL6Q6ICC9 239 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 DPY19L2P1Q6NXN4 242 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 NLGN4YQ8NFZ3 816 aaPredicted RBP10.9□□□□□ -0.66
VCL-202ENST00000372755 RAB39BQ96DA2 213 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 OR5B2Q96R09 309 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 MAP3K3Q99759 626 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 HAO2Q9NYQ3 351 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 MPIG6BO95866 241 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 CD79AP11912 226 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 BDKRB2P30411 391 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 CHRNB4P30926 498 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 CD70P32970 193 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 ERVPABLB-1P60509 514 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 SH3BP2P78314 561 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 METTL2BQ6P1Q9 378 aaKnown RBP10.9□□□□□ -0.66
VCL-202ENST00000372755 DLK2Q6UY11 383 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 VWA5B2Q8N398 1253 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 OR51D1Q8NGF3 324 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 ZNF384Q8TF68 577 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 SACM1LQ9NTJ5 587 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 DNAJB11Q9UBS4 358 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 EBF1Q9UH73 591 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms