RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 SATB2Q9UPW6 733 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 KLHL20Q9Y2M5 609 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 OR10H3O60404 316 aa13.14□□□□□ -0.31
LDB3-204ENST00000372066 PLA2G2AP14555 144 aa13.14□□□□□ -0.31
LDB3-204ENST00000372066 ALOX12P18054 663 aa13.14□□□□□ -0.31
LDB3-204ENST00000372066 POLR2CP19387 275 aaPredicted RBP13.14□□□□□ -0.31
LDB3-204ENST00000372066 GSTM3P21266 225 aa13.14□□□□□ -0.31
LDB3-204ENST00000372066 PRKAR1BP31321 381 aa13.14□□□□□ -0.31
LDB3-204ENST00000372066 IFNGR2P38484 337 aa13.14□□□□□ -0.31
LDB3-204ENST00000372066 MC3RP41968 323 aa13.14□□□□□ -0.31
LDB3-204ENST00000372066 MAP2K4P45985 399 aa13.14□□□□□ -0.31
LDB3-204ENST00000372066 EMP3P54852 163 aa13.14□□□□□ -0.31
LDB3-204ENST00000372066 RAB15P59190 212 aa13.14□□□□□ -0.31
LDB3-204ENST00000372066 OLR1P78380 273 aa13.14□□□□□ -0.31
LDB3-204ENST00000372066 DUSP2Q05923 314 aa13.14□□□□□ -0.31
LDB3-204ENST00000372066 C12orf73Q69YU5 71 aa13.14□□□□□ -0.31
LDB3-204ENST00000372066 HEPHL1Q6MZM0 1159 aa13.14□□□□□ -0.31
LDB3-204ENST00000372066 PGBD2Q6P3X8 592 aa13.14□□□□□ -0.31
LDB3-204ENST00000372066 Q6ZPB1 254 aaPredicted RBP13.14□□□□□ -0.31
LDB3-204ENST00000372066 USP53Q70EK8 1073 aa13.14□□□□□ -0.31
LDB3-204ENST00000372066 C16orf62Q7Z3J2 963 aa13.14□□□□□ -0.31
LDB3-204ENST00000372066 OOSP2Q86WS3 158 aa13.14□□□□□ -0.31
LDB3-204ENST00000372066 CCDC103Q8IW40 242 aa13.14□□□□□ -0.31
LDB3-204ENST00000372066 STX19Q8N4C7 294 aa13.14□□□□□ -0.31
LDB3-204ENST00000372066 OR9A2Q8NGT5 310 aa13.14□□□□□ -0.31
LDB3-204ENST00000372066 KLHL6Q8WZ60 621 aa13.14□□□□□ -0.31
LDB3-204ENST00000372066 GGHQ92820 318 aa13.14□□□□□ -0.31
LDB3-204ENST00000372066 SLC38A4Q969I6 547 aa13.14□□□□□ -0.31
LDB3-204ENST00000372066 TCEAL2Q9H3H9 227 aaPredicted RBP13.14□□□□□ -0.31
LDB3-204ENST00000372066 ANKHQ9HCJ1 492 aa13.14□□□□□ -0.31
LDB3-204ENST00000372066 KLHL28Q9NXS3 571 aa13.14□□□□□ -0.31
LDB3-204ENST00000372066 RHCGQ9UBD6 479 aa13.14□□□□□ -0.31
LDB3-204ENST00000372066 REV1Q9UBZ9 1251 aa13.14□□□□□ -0.31
LDB3-204ENST00000372066 IFT52Q9Y366 437 aa13.14□□□□□ -0.31
LDB3-204ENST00000372066 SLC22A7Q9Y694 548 aa13.14□□□□□ -0.31
LDB3-204ENST00000372066 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.13□□□□□ -0.31
LDB3-204ENST00000372066 A0A0J9YVX5 310 aa13.13□□□□□ -0.31
LDB3-204ENST00000372066 CTSVO60911 334 aa13.13□□□□□ -0.31
LDB3-204ENST00000372066 NME6O75414 186 aaPredicted RBP13.13□□□□□ -0.31
LDB3-204ENST00000372066 INHBBP09529 407 aa13.13□□□□□ -0.31
LDB3-204ENST00000372066 C8orf89P0DMQ9 161 aa13.13□□□□□ -0.31
LDB3-204ENST00000372066 FAM214AQ32MH5 1076 aa13.13□□□□□ -0.31
LDB3-204ENST00000372066 MEDAGQ5VYS4 303 aa13.13□□□□□ -0.31
LDB3-204ENST00000372066 PTCHD4Q6ZW05 846 aa13.13□□□□□ -0.31
LDB3-204ENST00000372066 TRIM73Q86UV7 250 aa13.13□□□□□ -0.31
LDB3-204ENST00000372066 OR2L13Q8N349 312 aa13.13□□□□□ -0.31
LDB3-204ENST00000372066 TOR1AIP2Q8NFQ8 470 aa13.13□□□□□ -0.31
LDB3-204ENST00000372066 OR4D11Q8NGI4 311 aa13.13□□□□□ -0.31
LDB3-204ENST00000372066 OR10G6Q8NH81 332 aa13.13□□□□□ -0.31
LDB3-204ENST00000372066 ADAMTS15Q8TE58 950 aa13.13□□□□□ -0.31
LDB3-204ENST00000372066 UBE2FQ969M7 185 aa13.13□□□□□ -0.31
LDB3-204ENST00000372066 GIMAP5Q96F15 307 aa13.13□□□□□ -0.31
LDB3-204ENST00000372066 SLC46A1Q96NT5 459 aa13.13□□□□□ -0.31
LDB3-204ENST00000372066 RACGAP1Q9H0H5 632 aa13.13□□□□□ -0.31
LDB3-204ENST00000372066 POLR2J3Q9H1A7 115 aaKnown RBP13.13□□□□□ -0.31
LDB3-204ENST00000372066 SLC38A1Q9H2H9 487 aa13.13□□□□□ -0.31
LDB3-204ENST00000372066 TBC1D23Q9NUY8 699 aa13.13□□□□□ -0.31
LDB3-204ENST00000372066 AASSQ9UDR5 926 aa13.13□□□□□ -0.31
LDB3-204ENST00000372066 SCN3AQ9NY46 2000 aa13.13□□□□□ -0.31
LDB3-204ENST00000372066 A0A087WV62 115 aa13.12□□□□□ -0.31
LDB3-204ENST00000372066 A0A1W2PNU3 283 aaPredicted RBP13.12□□□□□ -0.31
LDB3-204ENST00000372066 WASHC1A8K0Z3 465 aa13.12□□□□□ -0.31
LDB3-204ENST00000372066 M0R3H8 397 aa13.12□□□□□ -0.31
LDB3-204ENST00000372066 P2RX6O15547 441 aa13.12□□□□□ -0.31
LDB3-204ENST00000372066 SEMA7AO75326 666 aa13.12□□□□□ -0.31
LDB3-204ENST00000372066 SOX30O94993 753 aa13.12□□□□□ -0.31
LDB3-204ENST00000372066 CTSEP14091 401 aa13.12□□□□□ -0.31
LDB3-204ENST00000372066 POU2F1P14859 743 aa13.12□□□□□ -0.31
LDB3-204ENST00000372066 STT3AP46977 705 aa13.12□□□□□ -0.31
LDB3-204ENST00000372066 ENTPD1P49961 510 aa13.12□□□□□ -0.31
LDB3-204ENST00000372066 XKP51811 444 aa13.12□□□□□ -0.31
LDB3-204ENST00000372066 OCA2Q04671 838 aa13.12□□□□□ -0.31
LDB3-204ENST00000372066 AQP6Q13520 282 aa13.12□□□□□ -0.31
LDB3-204ENST00000372066 IRF3Q14653 427 aa13.12□□□□□ -0.31
LDB3-204ENST00000372066 SPCS2Q15005 226 aa13.12□□□□□ -0.31
LDB3-204ENST00000372066 DGUOKQ16854 277 aa13.12□□□□□ -0.31
LDB3-204ENST00000372066 ZNF311Q5JNZ3 666 aa13.12□□□□□ -0.31
LDB3-204ENST00000372066 PERM1Q5SV97 790 aa13.12□□□□□ -0.31
LDB3-204ENST00000372066 MFSD12Q6NUT3 480 aa13.12□□□□□ -0.31
LDB3-204ENST00000372066 ZCCHC12Q6PEW1 402 aa13.12□□□□□ -0.31
LDB3-204ENST00000372066 ZNF367Q7RTV3 350 aa13.12□□□□□ -0.31
LDB3-204ENST00000372066 ZCCHC10Q8TBK6 192 aa13.12□□□□□ -0.31
LDB3-204ENST00000372066 PMM1Q92871 262 aa13.12□□□□□ -0.31
LDB3-204ENST00000372066 WBP1Q96G27 269 aa13.12□□□□□ -0.31
LDB3-204ENST00000372066 CDCA4Q9BXL8 241 aa13.12□□□□□ -0.31
LDB3-204ENST00000372066 RSPO3Q9BXY4 272 aaPredicted RBP13.12□□□□□ -0.31
LDB3-204ENST00000372066 POLR2J2Q9GZM3 115 aaKnown RBP13.12□□□□□ -0.31
LDB3-204ENST00000372066 EVA1AQ9H8M9 152 aa13.12□□□□□ -0.31
LDB3-204ENST00000372066 TRBV23OR9-2A0A075B6M9 112 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 LMO7DNF2Z398 122 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 H0YGG7 62 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 M0R3G1 203 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 CNOT3O75175 753 aaKnown RBP13.11□□□□□ -0.31
LDB3-204ENST00000372066 AK1P00568 194 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 CPMP14384 443 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 PORP16435 677 aaPredicted RBP13.11□□□□□ -0.31
LDB3-204ENST00000372066 GSSP48637 474 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 ARF3P61204 181 aaPredicted RBP13.11□□□□□ -0.31
LDB3-204ENST00000372066 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.11□□□□□ -0.31
LDB3-204ENST00000372066 SEC23BQ15437 767 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms