RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 ATP1B2P14415 290 aaPredicted RBP14.51□□□□□ -0.09
COL5A1-201ENST00000371817 RAP1AP62834 184 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 BRICD5Q6PL45 260 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 RPS27LQ71UM5 84 aaKnown RBP14.51□□□□□ -0.09
COL5A1-201ENST00000371817 NANPQ8TBE9 248 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 E7ESA3 106 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 MT-ND4LP03901 98 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 SYPP08247 313 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 CES4AQ5XG92 561 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 ADAMTS16Q8TE57 1224 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 CDCA5Q96FF9 252 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 NICN1Q9BSH3 213 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 HIF1ANQ9NWT6 349 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 ARHGAP33O14559 1287 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 FKTNO75072 461 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 OSMP13725 252 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 ETV4P43268 484 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 CRYBB1P53674 252 aaPredicted RBP14.51□□□□□ -0.09
COL5A1-201ENST00000371817 IRF4Q15306 451 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 CLEC9AQ6UXN8 241 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 ZFAND4Q86XD8 727 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 FRMD1Q8N878 549 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 VRTNQ9H8Y1 702 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 MYEF2Q9P2K5 600 aaKnown RBP14.51□□□□□ -0.09
COL5A1-201ENST00000371817 NDUFS1P28331 727 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 KCNQ1P51787 676 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 BDH1Q02338 343 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 CAMK2DQ13557 499 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 KCNC3Q14003 757 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 EBPQ15125 230 aaKnown RBP14.5□□□□□ -0.09
COL5A1-201ENST00000371817 VASNQ6EMK4 673 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 Q8N9G6 341 aaPredicted RBP14.5□□□□□ -0.09
COL5A1-201ENST00000371817 YIPF5Q969M3 257 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 IGFLR1Q9H665 355 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.5□□□□□ -0.09
COL5A1-201ENST00000371817 HAO2Q9NYQ3 351 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 A0A0B4J2A0 478 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 BIDP55957 195 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 SHFQ7M4L6 423 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 SLAIN1Q8ND83 568 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 ANKK1Q8NFD2 765 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 ZNF417Q8TAU3 575 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 FRS2Q8WU20 508 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 TTPALQ9BTX7 342 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 OR2AG1Q9H205 316 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 ZDHHC7Q9NXF8 308 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 SHPKQ9UHJ6 478 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 EPHX1P07099 455 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 SMIM10L2AP0DMW4 78 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 SMIM10L2BP0DMW5 78 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 CALCRP30988 508 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 GDF5P43026 501 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 CTSOP43234 321 aaPredicted RBP14.5□□□□□ -0.09
COL5A1-201ENST00000371817 TCTE1Q5JU00 501 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 CORO2AQ92828 525 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 INTS14Q96SY0 518 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 NSUN3Q9H649 340 aaKnown RBP14.5□□□□□ -0.09
COL5A1-201ENST00000371817 RBFOX1Q9NWB1 397 aaKnown RBP14.5□□□□□ -0.09
COL5A1-201ENST00000371817 DDTLA6NHG4 134 aaPredicted RBP14.5□□□□□ -0.09
COL5A1-201ENST00000371817 CD300LBA8K4G0 201 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 B4GAT1O43505 415 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 TP53P04637 393 aaPredicted RBP14.5□□□□□ -0.09
COL5A1-201ENST00000371817 APODP05090 189 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 HBG1P69891 147 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 HBG2P69892 147 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 LYSMD3Q7Z3D4 306 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 LFNGQ8NES3 379 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 TSGA13Q96PP4 275 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 METTL7AQ9H8H3 244 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 RIC1Q4ADV7 1423 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 TRAPPC6AO75865 159 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 HNRNPA3P51991 378 aaKnown RBP14.5□□□□□ -0.09
COL5A1-201ENST00000371817 GPR50Q13585 617 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 SFRP5Q5T4F7 317 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 CPA6Q8N4T0 437 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 ZNF461Q8TAF7 563 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 NUS1Q96E22 293 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 PTGES2Q9H7Z7 377 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 SLC22A11Q9NSA0 550 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 BABAM2Q9NXR7 383 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 CACNG3O60359 315 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 SLC17A1Q14916 467 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 ZNF791Q3KP31 576 aaPredicted RBP14.5□□□□□ -0.09
COL5A1-201ENST00000371817 C17orf107Q6ZR85 190 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 SIGLECL1Q8N7X8 197 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 OR6F1Q8NGZ6 308 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 IL31RAQ8NI17 732 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 ZFAND1Q8TCF1 268 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 PCED1BQ96HM7 432 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 FAM173AQ9BQD7 235 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 C1orf123Q9NWV4 160 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 DEC1Q9P2X7 70 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 ADAMTS13Q76LX8 1427 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 ITGB2P05107 769 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 HNF1AP20823 631 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 CXCR4P61073 352 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 S100A7AQ86SG5 101 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 RETREG3Q86VR2 466 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 HORMAD2Q8N7B1 307 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 ZNF251Q9BRH9 671 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms