RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 STX18Q9P2W9 335 aaKnown RBP6.56□□□□□ -1.36
USP1-202ENST00000371146 AURKCQ9UQB9 309 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 PCDHGB2Q9Y5G2 931 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 DENND4CQ5VZ89 1909 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 A0A1W2PPV9 198 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 FRS3O43559 492 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 TMEM11P17152 192 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 MAPK1P28482 360 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 NKX2-5P52952 324 aaPredicted RBP6.55□□□□□ -1.36
USP1-202ENST00000371146 EPHA4P54764 986 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 TIAL1Q01085 375 aaKnown RBP eCLIP6.55□□□□□ -1.36
USP1-202ENST00000371146 PPP1R8Q12972 351 aaKnown RBP6.55□□□□□ -1.36
USP1-202ENST00000371146 SGCAQ16586 387 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 DCAF10Q5QP82 559 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 ANKRD34AQ69YU3 496 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 CYP2R1Q6VVX0 501 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 LARP4Q71RC2 724 aaKnown RBP eCLIP6.55□□□□□ -1.361e-6■■■□□ 19.2
USP1-202ENST00000371146 P4HA3Q7Z4N8 544 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 ADCK1Q86TW2 530 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 CNTN4Q8IWV2 1026 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 SPPL2AQ8TCT8 520 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 FIG4Q92562 907 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 C16orf58Q96GQ5 468 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 ZNF486Q96H40 463 aaPredicted RBP6.55□□□□□ -1.36
USP1-202ENST00000371146 C7orf26Q96N11 449 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 MENTQ9BUN1 341 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 DUSP26Q9BV47 211 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 ZNF717Q9BY31 904 aaPredicted RBP6.55□□□□□ -1.36
USP1-202ENST00000371146 QRSL1Q9H0R6 528 aaKnown RBP6.55□□□□□ -1.36
USP1-202ENST00000371146 EPB41L4BQ9H329 900 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 C3orf14Q9HBI5 128 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 EXTL2Q9UBQ6 330 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 VTI1BQ9UEU0 232 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 EGFL7Q9UHF1 273 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 TINAGQ9UJW2 476 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 ERGIC3Q9Y282 383 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 RAP2CQ9Y3L5 183 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 COPG1Q9Y678 874 aaKnown RBP6.55□□□□□ -1.36
USP1-202ENST00000371146 WDFY3Q8IZQ1 3526 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 RNF103-CHMP3A0A140T963 221 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 A0A1W2PR48 441 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 DBX1A6NMT0 343 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 MYO1GB0I1T2 1018 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 SHISA8B8ZZ34 492 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 EEF1E1-BLOC1S5C9J1V9 151 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 SLC28A1O00337 649 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 UBFD1O14562 309 aaKnown RBP6.55□□□□□ -1.36
USP1-202ENST00000371146 DSCR3O14972 297 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 EEF1E1O43324 174 aaKnown RBP6.55□□□□□ -1.36
USP1-202ENST00000371146 ITGA10O75578 1167 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 SLC7A1P30825 629 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 LIM2P55344 173 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 SIRPAP78324 504 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 TRA2AQ13595 282 aaKnown RBP eCLIP6.55□□□□□ -1.369e-6■□□□□ 11
USP1-202ENST00000371146 DUSP7Q16829 419 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 GTDC1Q4AE62 458 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 NADK2Q4G0N4 442 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 CPEB2Q7Z5Q1 589 aaKnown RBP6.55□□□□□ -1.36
USP1-202ENST00000371146 MRGPREQ86SM8 312 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 MFSD9Q8NBP5 474 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 FAM156AQ8NDB6 213 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 TMEM52Q8NDY8 209 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 OR11G2Q8NGC1 345 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 GNRHR2Q96P88 292 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 SYNPO2LQ9H987 977 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 TRIM33Q9UPN9 1127 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 IGSF10Q6WRI0 2623 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 OR2A25A4D2G3 310 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 K7EM74 188 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 SNX3O60493 162 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 GALR3O60755 368 aaPredicted RBP6.55□□□□□ -1.36
USP1-202ENST00000371146 TGDSO95455 350 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 NUDT17P0C025 328 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 BCKDHAP12694 445 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 TRHRP34981 398 aaPredicted RBP6.55□□□□□ -1.36
USP1-202ENST00000371146 CAPZA2P47755 286 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 CCT3P49368 545 aaKnown RBP6.55□□□□□ -1.36
USP1-202ENST00000371146 CYB561P49447 251 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 MTPNP58546 118 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 CLN3Q13286 438 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 TSC22D1Q15714 1073 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 INPP5JQ15735 1006 aaPredicted RBP6.55□□□□□ -1.36
USP1-202ENST00000371146 RHBDD2Q6NTF9 364 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 GFRALQ6UXV0 394 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 ZNF793Q6ZN11 406 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 OVCH1Q7RTY7 1134 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 ERMP1Q7Z2K6 904 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 PDSS2Q86YH6 399 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 MCEMP1Q8IX19 187 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 BEST3Q8N1M1 668 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 VWA5B2Q8N398 1253 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 DTX3LQ8TDB6 740 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 GRHL3Q8TE85 626 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 NRG4Q8WWG1 115 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 GAL3ST3Q96A11 431 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 FAM120BQ96EK7 910 aaKnown RBP6.55□□□□□ -1.36
USP1-202ENST00000371146 POM121Q96HA1 1249 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 LMF1Q96S06 567 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 SEPHS2Q99611 448 aa6.55□□□□□ -1.36
USP1-202ENST00000371146 EFHD1Q9BUP0 239 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms