RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 POLR1CO15160 346 aaPredicted RBP20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 NDUFB2O95178 105 aa20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 CAPNS1P04632 268 aa20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 LIPIQ6XZB0 460 aa20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 Q6ZSR6 202 aa20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 HSD11B1LQ7Z5J1 315 aa20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 NECTIN4Q96NY8 510 aa20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 BIRC8Q96P09 236 aa20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 OR5B12Q96R08 314 aa20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 PCDHGA8Q9Y5G5 932 aa20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 PCGF3Q3KNV8 242 aa20.93■□□□□ 0.94
TM9SF3-201ENST00000371142 MFSD6LQ8IWD5 586 aa20.93■□□□□ 0.94
TM9SF3-201ENST00000371142 SDR9C7Q8NEX9 313 aa20.93■□□□□ 0.94
TM9SF3-201ENST00000371142 OR13J1Q8NGT2 312 aa20.93■□□□□ 0.94
TM9SF3-201ENST00000371142 TRUB1Q8WWH5 349 aaKnown RBP20.93■□□□□ 0.94
TM9SF3-201ENST00000371142 CCDC32Q9BV29 185 aa20.93■□□□□ 0.94
TM9SF3-201ENST00000371142 OR2B2Q9GZK3 357 aa20.93■□□□□ 0.94
TM9SF3-201ENST00000371142 CDH20Q9HBT6 801 aa20.93■□□□□ 0.94
TM9SF3-201ENST00000371142 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.93■□□□□ 0.94
TM9SF3-201ENST00000371142 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.93■□□□□ 0.94
TM9SF3-201ENST00000371142 LCKP06239 509 aa20.93■□□□□ 0.94
TM9SF3-201ENST00000371142 SQSTM1Q13501 440 aa20.93■□□□□ 0.94
TM9SF3-201ENST00000371142 DTWD1Q8N5C7 304 aa20.93■□□□□ 0.94
TM9SF3-201ENST00000371142 GPR26Q8NDV2 337 aa20.93■□□□□ 0.94
TM9SF3-201ENST00000371142 NEIL2Q969S2 332 aa20.93■□□□□ 0.94
TM9SF3-201ENST00000371142 CEBPBP17676 345 aa20.93■□□□□ 0.94
TM9SF3-201ENST00000371142 OR5W2Q8NH69 310 aa20.93■□□□□ 0.94
TM9SF3-201ENST00000371142 PCDHA9Q9Y5H5 950 aa20.93■□□□□ 0.94
TM9SF3-201ENST00000371142 IGKV6D-21A0A0A0MT36 114 aa20.93■□□□□ 0.94
TM9SF3-201ENST00000371142 GRXCR2A6NFK2 248 aa20.93■□□□□ 0.94
TM9SF3-201ENST00000371142 CA3P07451 260 aa20.93■□□□□ 0.94
TM9SF3-201ENST00000371142 CD79AP11912 226 aa20.93■□□□□ 0.94
TM9SF3-201ENST00000371142 AGTR1P30556 359 aa20.93■□□□□ 0.94
TM9SF3-201ENST00000371142 CNOT11Q9UKZ1 510 aaKnown RBP20.93■□□□□ 0.94
TM9SF3-201ENST00000371142 ANKRD28O15084 1053 aa20.92■□□□□ 0.94
TM9SF3-201ENST00000371142 LDB3O75112 727 aa20.92■□□□□ 0.94
TM9SF3-201ENST00000371142 IVDP26440 423 aa20.92■□□□□ 0.94
TM9SF3-201ENST00000371142 MAOBP27338 520 aa20.92■□□□□ 0.94
TM9SF3-201ENST00000371142 HYAL4Q2M3T9 481 aa20.92■□□□□ 0.94
TM9SF3-201ENST00000371142 CCNL2Q96S94 520 aaPredicted RBP20.92■□□□□ 0.94
TM9SF3-201ENST00000371142 PLEKHA3Q9HB20 300 aa20.92■□□□□ 0.94
TM9SF3-201ENST00000371142 F5H5K5 113 aa20.92■□□□□ 0.94
TM9SF3-201ENST00000371142 HBQ1P09105 142 aa20.92■□□□□ 0.94
TM9SF3-201ENST00000371142 MSL3P1P0C860 447 aa20.92■□□□□ 0.94
TM9SF3-201ENST00000371142 LBX1P52954 281 aa20.92■□□□□ 0.94
TM9SF3-201ENST00000371142 MS4A2Q01362 244 aa20.92■□□□□ 0.94
TM9SF3-201ENST00000371142 SLC15A4Q8N697 577 aa20.92■□□□□ 0.94
TM9SF3-201ENST00000371142 TM9SF4Q92544 642 aa20.92■□□□□ 0.94
TM9SF3-201ENST00000371142 SPTSSAQ969W0 71 aa20.92■□□□□ 0.94
TM9SF3-201ENST00000371142 OR51B6Q9H340 312 aa20.92■□□□□ 0.94
TM9SF3-201ENST00000371142 A0A0A6YYC8 382 aaPredicted RBP20.92■□□□□ 0.94
TM9SF3-201ENST00000371142 A6NL46 340 aa20.92■□□□□ 0.94
TM9SF3-201ENST00000371142 I3L1I5 382 aaPredicted RBP20.92■□□□□ 0.94
TM9SF3-201ENST00000371142 ACTBP60709 375 aa20.92■□□□□ 0.94
TM9SF3-201ENST00000371142 PRPS1P60891 318 aa20.92■□□□□ 0.94
TM9SF3-201ENST00000371142 ACTG1P63261 375 aa20.92■□□□□ 0.94
TM9SF3-201ENST00000371142 PSPHP78330 225 aa20.92■□□□□ 0.94
TM9SF3-201ENST00000371142 AK6Q9Y3D8 172 aaKnown RBP20.92■□□□□ 0.94
TM9SF3-201ENST00000371142 IER3IP1Q9Y5U9 82 aa20.92■□□□□ 0.94
TM9SF3-201ENST00000371142 MAGED1Q9Y5V3 778 aaPredicted RBP20.92■□□□□ 0.94
TM9SF3-201ENST00000371142 PHRF1Q9P1Y6 1649 aaKnown RBP20.92■□□□□ 0.94
TM9SF3-201ENST00000371142 DCDC2BA2VCK2 349 aa20.92■□□□□ 0.94
TM9SF3-201ENST00000371142 OR8U9P0C7N5 309 aa20.92■□□□□ 0.94
TM9SF3-201ENST00000371142 CYBAP13498 195 aa20.92■□□□□ 0.94
TM9SF3-201ENST00000371142 PXNP49023 591 aaPredicted RBP20.92■□□□□ 0.94
TM9SF3-201ENST00000371142 NFATC3Q12968 1075 aa20.92■□□□□ 0.94
TM9SF3-201ENST00000371142 PNCKQ6P2M8 343 aa20.92■□□□□ 0.94
TM9SF3-201ENST00000371142 DPY19L4Q7Z388 723 aa20.92■□□□□ 0.94
TM9SF3-201ENST00000371142 METTL25Q8N6Q8 603 aa20.92■□□□□ 0.94
TM9SF3-201ENST00000371142 NANOS1Q8WY41 292 aaKnown RBP20.92■□□□□ 0.94
TM9SF3-201ENST00000371142 RTP4Q96DX8 246 aa20.92■□□□□ 0.94
TM9SF3-201ENST00000371142 CRB3Q9BUF7 120 aa20.92■□□□□ 0.94
TM9SF3-201ENST00000371142 ARHGEF15O94989 841 aa20.92■□□□□ 0.94
TM9SF3-201ENST00000371142 ABHD17BQ5VST6 288 aa20.92■□□□□ 0.94
TM9SF3-201ENST00000371142 TOMM40LQ969M1 308 aa20.92■□□□□ 0.94
TM9SF3-201ENST00000371142 XRN1Q8IZH2 1706 aaKnown RBP20.92■□□□□ 0.94
TM9SF3-201ENST00000371142 CACNA1FO60840 1977 aa20.92■□□□□ 0.94
TM9SF3-201ENST00000371142 DDCP20711 480 aa20.91■□□□□ 0.94
TM9SF3-201ENST00000371142 CHMP24386 653 aa20.91■□□□□ 0.94
TM9SF3-201ENST00000371142 MRPL10Q7Z7H8 261 aaKnown RBP20.91■□□□□ 0.94
TM9SF3-201ENST00000371142 KDM1BQ8NB78 822 aa20.91■□□□□ 0.94
TM9SF3-201ENST00000371142 FBXO27Q8NI29 283 aa20.91■□□□□ 0.94
TM9SF3-201ENST00000371142 FOLH1BQ9HBA9 442 aa20.91■□□□□ 0.94
TM9SF3-201ENST00000371142 ZNF160Q9HCG1 818 aa20.91■□□□□ 0.94
TM9SF3-201ENST00000371142 LSM5Q9Y4Y9 91 aaKnown RBP20.91■□□□□ 0.94
TM9SF3-201ENST00000371142 WDR53Q7Z5U6 358 aaPredicted RBP20.91■□□□□ 0.94
TM9SF3-201ENST00000371142 LILRB2Q8N423 598 aa20.91■□□□□ 0.94
TM9SF3-201ENST00000371142 CDS1Q92903 461 aa20.91■□□□□ 0.94
TM9SF3-201ENST00000371142 HHIPQ96QV1 700 aa20.91■□□□□ 0.94
TM9SF3-201ENST00000371142 PIP5KL1Q5T9C9 394 aa20.91■□□□□ 0.94
TM9SF3-201ENST00000371142 CDRT4Q8N9R6 151 aa20.91■□□□□ 0.94
TM9SF3-201ENST00000371142 PGAP3Q96FM1 320 aaPredicted RBP20.91■□□□□ 0.94
TM9SF3-201ENST00000371142 PINK1Q9BXM7 581 aa20.91■□□□□ 0.94
TM9SF3-201ENST00000371142 TAS2R8Q9NYW2 309 aa20.91■□□□□ 0.94
TM9SF3-201ENST00000371142 NALCNQ8IZF0 1738 aa20.91■□□□□ 0.94
TM9SF3-201ENST00000371142 GALNT1Q10472 559 aaPredicted RBP20.91■□□□□ 0.94
TM9SF3-201ENST00000371142 NADSYN1Q6IA69 706 aa20.91■□□□□ 0.94
TM9SF3-201ENST00000371142 TMEM150AQ86TG1 271 aa20.91■□□□□ 0.94
TM9SF3-201ENST00000371142 ST6GALNAC5Q9BVH7 336 aa20.91■□□□□ 0.94
TM9SF3-201ENST00000371142 FBRSQ9HAH7 460 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms