RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 IL7P13232 177 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 GPX2P18283 190 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 DNASE1P24855 282 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 SLC5A2P31639 672 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 MMP12P39900 470 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 ART1P52961 327 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 TUBB3Q13509 450 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 OCLNQ16625 522 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 NHSL2Q5HYW2 709 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 TMEM207Q6UWW9 146 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 USP53Q70EK8 1073 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 PIWIL3Q7Z3Z3 882 aaKnown RBP11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 IGFN1Q86VF2 1251 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 ZNF584Q8IVC4 421 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 SYNPOQ8N3V7 929 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 FAM3CQ92520 227 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 MR1Q95460 341 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 TREX2Q9BQ50 279 aaPredicted RBP11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 SAP130Q9H0E3 1048 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 OLAHQ9NV23 265 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 TEX13CA0A0J9YWL9 993 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 BOLA2-SMG1P6H3BVE0 249 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 SLC6A8P48029 635 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 ZNF84P51523 738 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 Q6ZSR6 202 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 B3GNT8Q7Z7M8 397 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 CCDC54Q8NEL0 328 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 NDNFQ8TB73 568 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 ZNF717Q9BY31 904 aaPredicted RBP11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 P2RY12Q9H244 342 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 OR51E2Q9H255 320 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 TUBB1Q9H4B7 451 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 ZBTB20Q9HC78 741 aaPredicted RBP11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 RDH8Q9NYR8 311 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 RARRES3Q9UL19 164 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 FARSAQ9Y285 508 aaKnown RBP11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 A0A1W2PPL8 197 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 AGAP5A6NIR3 686 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 PVALBP20472 110 aaPredicted RBP11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 BTBD16Q32M84 506 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 C11orf91Q3C1V1 193 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 TMEM53Q6P2H8 277 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 LEG1Q6P5S2 330 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 SH2D5Q6ZV89 423 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 SHFQ7M4L6 423 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 STX12Q86Y82 276 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 TMEM151BQ8IW70 566 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 SPERTQ8NA61 448 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 WDR20Q8TBZ3 569 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 NKX2-4Q9H2Z4 354 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 TP63Q9H3D4 680 aaPredicted RBP11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 IL20RAQ9UHF4 553 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 CSNK1G3Q9Y6M4 447 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 AP1G1O43747 822 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 MMP2P08253 660 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 ZDHHC11BP0C7U3 371 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 F3P13726 295 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 C21orf33P30042 268 aaPredicted RBP11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 GJA4P35212 333 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 SLC6A11P48066 632 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 RNF144AP50876 292 aaPredicted RBP11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 VAMP2P63027 116 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 C6orf132Q5T0Z8 1188 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 SLC18B1Q6NT16 456 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 PODNL1Q6PEZ8 512 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 MFSD6LQ8IWD5 586 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 RNF175Q8N4F7 328 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 OR2L8Q8NGY9 312 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 ZFP90Q8TF47 636 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 TMEM246Q9BRR3 403 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 C1QTNF2Q9BXJ5 285 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 ZBP1Q9H171 429 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 ATG5Q9H1Y0 275 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 DOCK2Q92608 1830 aa11.17□□□□□ -0.62
DEPDC1-201ENST00000370966 ARAP2Q8WZ64 1704 aa11.16□□□□□ -0.62
DEPDC1-201ENST00000370966 CENPBD1B2RD01 187 aa11.16□□□□□ -0.62
DEPDC1-201ENST00000370966 FRS3O43559 492 aa11.16□□□□□ -0.62
DEPDC1-201ENST00000370966 CR2P20023 1033 aa11.16□□□□□ -0.62
DEPDC1-201ENST00000370966 MRPL58Q14197 206 aaKnown RBP11.16□□□□□ -0.62
DEPDC1-201ENST00000370966 PTPRRQ15256 657 aa11.16□□□□□ -0.62
DEPDC1-201ENST00000370966 AFMIDQ63HM1 303 aa11.16□□□□□ -0.62
DEPDC1-201ENST00000370966 ZER1Q7Z7L7 766 aa11.16□□□□□ -0.62
DEPDC1-201ENST00000370966 CD93Q9NPY3 652 aa11.16□□□□□ -0.62
DEPDC1-201ENST00000370966 C12orf4Q9NQ89 552 aa11.16□□□□□ -0.62
DEPDC1-201ENST00000370966 THSD1Q9NS62 852 aa11.16□□□□□ -0.62
DEPDC1-201ENST00000370966 CUEDC1Q9NWM3 386 aaPredicted RBP11.16□□□□□ -0.62
DEPDC1-201ENST00000370966 NLKQ9UBE8 527 aa11.16□□□□□ -0.62
DEPDC1-201ENST00000370966 SCN9AQ15858 1988 aa11.16□□□□□ -0.62
DEPDC1-201ENST00000370966 A8MV72 311 aaPredicted RBP11.16□□□□□ -0.62
DEPDC1-201ENST00000370966 OR2T1O43869 369 aa11.16□□□□□ -0.62
DEPDC1-201ENST00000370966 ATE1O95260 518 aa11.16□□□□□ -0.62
DEPDC1-201ENST00000370966 KCNK5O95279 499 aa11.16□□□□□ -0.62
DEPDC1-201ENST00000370966 PPP1R3DO95685 299 aa11.16□□□□□ -0.62
DEPDC1-201ENST00000370966 GPR75O95800 540 aa11.16□□□□□ -0.62
DEPDC1-201ENST00000370966 NUDT7P0C024 238 aa11.16□□□□□ -0.62
DEPDC1-201ENST00000370966 CTBSQ01459 385 aa11.16□□□□□ -0.62
DEPDC1-201ENST00000370966 DEFB110Q30KQ9 67 aa11.16□□□□□ -0.62
DEPDC1-201ENST00000370966 HORMAD2Q8N7B1 307 aa11.16□□□□□ -0.62
DEPDC1-201ENST00000370966 ADAMTS16Q8TE57 1224 aa11.16□□□□□ -0.62
DEPDC1-201ENST00000370966 TMEM30AQ9NV96 361 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms