RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 MARCH3Q86UD3 253 aa13.74□□□□□ -0.21
SSR4-204ENST00000370087 PLD6Q8N2A8 252 aaKnown RBP13.74□□□□□ -0.21
SSR4-204ENST00000370087 ZNF619Q8N2I2 560 aa13.74□□□□□ -0.21
SSR4-204ENST00000370087 C1orf52Q8N6N3 182 aaKnown RBP13.74□□□□□ -0.21
SSR4-204ENST00000370087 UHMK1Q8TAS1 419 aaKnown RBP13.74□□□□□ -0.21
SSR4-204ENST00000370087 SMAP2Q8WU79 429 aaPredicted RBP13.74□□□□□ -0.21
SSR4-204ENST00000370087 GFM2Q969S9 779 aaKnown RBP13.74□□□□□ -0.21
SSR4-204ENST00000370087 GTPBP3Q969Y2 492 aaKnown RBP13.74□□□□□ -0.21
SSR4-204ENST00000370087 GMPPAQ96IJ6 420 aaPredicted RBP13.74□□□□□ -0.21
SSR4-204ENST00000370087 ADGRG7Q96K78 797 aa13.74□□□□□ -0.21
SSR4-204ENST00000370087 NTMT1Q9BV86 223 aa13.74□□□□□ -0.21
SSR4-204ENST00000370087 DPH5Q9H2P9 285 aa13.74□□□□□ -0.21
SSR4-204ENST00000370087 C12orf49Q9H741 205 aa13.74□□□□□ -0.21
SSR4-204ENST00000370087 PFDN4Q9NQP4 134 aa13.74□□□□□ -0.21
SSR4-204ENST00000370087 WHRNQ9P202 907 aa13.74□□□□□ -0.21
SSR4-204ENST00000370087 AP4B1Q9Y6B7 739 aa13.74□□□□□ -0.21
SSR4-204ENST00000370087 EIF1AYO14602 144 aaKnown RBP13.73□□□□□ -0.21
SSR4-204ENST00000370087 GUCY1B2O75343 617 aa13.73□□□□□ -0.21
SSR4-204ENST00000370087 URI1O94763 535 aaPredicted RBP13.73□□□□□ -0.21
SSR4-204ENST00000370087 CD8AP01732 235 aa13.73□□□□□ -0.21
SSR4-204ENST00000370087 PSMB1P20618 241 aaKnown RBP13.73□□□□□ -0.21
SSR4-204ENST00000370087 IL11P20809 199 aa13.73□□□□□ -0.21
SSR4-204ENST00000370087 CTBP2P56545 445 aa13.73□□□□□ -0.21
SSR4-204ENST00000370087 RPS3AP61247 264 aaKnown RBP13.73□□□□□ -0.21
SSR4-204ENST00000370087 ZNF155Q12901 538 aaPredicted RBP13.73□□□□□ -0.21
SSR4-204ENST00000370087 IFT88Q13099 833 aa13.73□□□□□ -0.21
SSR4-204ENST00000370087 ACAP2Q15057 778 aa13.73□□□□□ -0.21
SSR4-204ENST00000370087 PRSS53Q2L4Q9 553 aa13.73□□□□□ -0.21
SSR4-204ENST00000370087 FAM83EQ2M2I3 478 aa13.73□□□□□ -0.21
SSR4-204ENST00000370087 ZNF672Q499Z4 452 aaPredicted RBP13.73□□□□□ -0.21
SSR4-204ENST00000370087 TCHHL1Q5QJ38 904 aaPredicted RBP13.73□□□□□ -0.21
SSR4-204ENST00000370087 NCMAPQ5T1S8 102 aa13.73□□□□□ -0.21
SSR4-204ENST00000370087 MFSD12Q6NUT3 480 aa13.73□□□□□ -0.21
SSR4-204ENST00000370087 LETMD1Q6P1Q0 360 aa13.73□□□□□ -0.21
SSR4-204ENST00000370087 OR4F6Q8NGB9 312 aa13.73□□□□□ -0.21
SSR4-204ENST00000370087 OR10D3Q8NH80 312 aa13.73□□□□□ -0.21
SSR4-204ENST00000370087 KIF18AQ8NI77 898 aa13.73□□□□□ -0.21
SSR4-204ENST00000370087 FBF1Q8TES7 1133 aa13.73□□□□□ -0.21
SSR4-204ENST00000370087 DUSP19Q8WTR2 217 aa13.73□□□□□ -0.21
SSR4-204ENST00000370087 ATP6V1E2Q96A05 226 aa13.73□□□□□ -0.21
SSR4-204ENST00000370087 EXOSC8Q96B26 276 aaKnown RBP13.73□□□□□ -0.21
SSR4-204ENST00000370087 PHF21BQ96EK2 531 aa13.73□□□□□ -0.21
SSR4-204ENST00000370087 C19orf24Q9BVV8 132 aa13.73□□□□□ -0.21
SSR4-204ENST00000370087 OR10H1Q9Y4A9 318 aa13.73□□□□□ -0.21
SSR4-204ENST00000370087 TNPO3Q9Y5L0 923 aaKnown RBP13.73□□□□□ -0.21
SSR4-204ENST00000370087 FREM1Q5H8C1 2179 aa13.73□□□□□ -0.21
SSR4-204ENST00000370087 UQCRHLA0A096LP55 91 aa13.72□□□□□ -0.21
SSR4-204ENST00000370087 GCM2O75603 506 aaPredicted RBP13.72□□□□□ -0.21
SSR4-204ENST00000370087 KLHL2O95198 593 aa13.72□□□□□ -0.21
SSR4-204ENST00000370087 PLGP00747 810 aaPredicted RBP13.72□□□□□ -0.21
SSR4-204ENST00000370087 ALDOAP04075 364 aaKnown RBP13.72□□□□□ -0.21
SSR4-204ENST00000370087 IL3P08700 152 aa13.72□□□□□ -0.21
SSR4-204ENST00000370087 TSPAN8P19075 237 aa13.72□□□□□ -0.21
SSR4-204ENST00000370087 PTNP21246 168 aa13.72□□□□□ -0.21
SSR4-204ENST00000370087 AGTR1P30556 359 aa13.72□□□□□ -0.21
SSR4-204ENST00000370087 RAE1P78406 368 aaKnown RBP13.72□□□□□ -0.21
SSR4-204ENST00000370087 ERCC6LQ2NKX8 1250 aa13.72□□□□□ -0.21
SSR4-204ENST00000370087 GGTA1PQ4G0N0 100 aa13.72□□□□□ -0.21
SSR4-204ENST00000370087 SH2D4BQ5SQS7 431 aa13.72□□□□□ -0.21
SSR4-204ENST00000370087 MROH9Q5TGP6 573 aa13.72□□□□□ -0.21
SSR4-204ENST00000370087 APOOLQ6UXV4 268 aa13.72□□□□□ -0.21
SSR4-204ENST00000370087 GALNT10Q86SR1 603 aa13.72□□□□□ -0.21
SSR4-204ENST00000370087 MTBPQ96DY7 904 aa13.72□□□□□ -0.21
SSR4-204ENST00000370087 KLHDC3Q9BQ90 382 aa13.72□□□□□ -0.21
SSR4-204ENST00000370087 TRAF4Q9BUZ4 470 aaPredicted RBP13.72□□□□□ -0.21
SSR4-204ENST00000370087 FAIM2Q9BWQ8 316 aa13.72□□□□□ -0.21
SSR4-204ENST00000370087 PRRG4Q9BZD6 226 aa13.72□□□□□ -0.21
SSR4-204ENST00000370087 OR10A4Q9H209 315 aa13.72□□□□□ -0.21
SSR4-204ENST00000370087 ELOVL6Q9H5J4 265 aa13.72□□□□□ -0.21
SSR4-204ENST00000370087 GRHL1Q9NZI5 618 aa13.72□□□□□ -0.21
SSR4-204ENST00000370087 PSME2Q9UL46 239 aa13.72□□□□□ -0.21
SSR4-204ENST00000370087 ABCG2Q9UNQ0 655 aa13.72□□□□□ -0.21
SSR4-204ENST00000370087 GPR52Q9Y2T5 361 aa13.72□□□□□ -0.21
SSR4-204ENST00000370087 A0A096LPK6 155 aa13.71□□□□□ -0.21
SSR4-204ENST00000370087 A0A1W2PP18 115 aa13.71□□□□□ -0.21
SSR4-204ENST00000370087 LINC01387J3KSC0 135 aa13.71□□□□□ -0.21
SSR4-204ENST00000370087 EIF3HO15372 352 aaKnown RBP eCLIP13.71□□□□□ -0.21
SSR4-204ENST00000370087 CXCL13O43927 109 aa13.71□□□□□ -0.21
SSR4-204ENST00000370087 BCAS2O75934 225 aaPredicted RBP13.71□□□□□ -0.21
SSR4-204ENST00000370087 CD3EP07766 207 aa13.71□□□□□ -0.21
SSR4-204ENST00000370087 CHN1P15882 459 aa13.71□□□□□ -0.21
SSR4-204ENST00000370087 BSPH1Q075Z2 132 aa13.71□□□□□ -0.21
SSR4-204ENST00000370087 TAB1Q15750 504 aa13.71□□□□□ -0.21
SSR4-204ENST00000370087 WHAMMP3Q1A5X7 153 aa13.71□□□□□ -0.21
SSR4-204ENST00000370087 METTL2BQ6P1Q9 378 aaKnown RBP13.71□□□□□ -0.21
SSR4-204ENST00000370087 BEND4Q6ZU67 534 aa13.71□□□□□ -0.21
SSR4-204ENST00000370087 MNS1Q8NEH6 495 aa13.71□□□□□ -0.21
SSR4-204ENST00000370087 ERP27Q96DN0 273 aa13.71□□□□□ -0.21
SSR4-204ENST00000370087 MRRFQ96E11 262 aaKnown RBP13.71□□□□□ -0.21
SSR4-204ENST00000370087 TACO1Q9BSH4 297 aaKnown RBP13.71□□□□□ -0.21
SSR4-204ENST00000370087 TRIM2Q9C040 744 aa13.71□□□□□ -0.21
SSR4-204ENST00000370087 FAM120CQ9NX05 1096 aaKnown RBP13.71□□□□□ -0.21
SSR4-204ENST00000370087 ZNF225Q9UK10 706 aa13.71□□□□□ -0.21
SSR4-204ENST00000370087 CDC42EP3Q9UKI2 254 aa13.71□□□□□ -0.21
SSR4-204ENST00000370087 VDAC3Q9Y277 283 aa13.71□□□□□ -0.21
SSR4-204ENST00000370087 CADP27708 2225 aa13.71□□□□□ -0.22
SSR4-204ENST00000370087 IGLV3-32A0A0A0MS00 114 aa13.7□□□□□ -0.22
SSR4-204ENST00000370087 DPRXA6NFQ7 191 aa13.7□□□□□ -0.22
SSR4-204ENST00000370087 HAX1O00165 279 aa13.7□□□□□ -0.22
SSR4-204ENST00000370087 TNFSF11O14788 317 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms