RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 ARL9Q6T311 187 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 HMGN2P46Q86SG4 172 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 CALHM3Q86XJ0 350 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 SNX29P2Q8IUI4 249 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 RNF113BQ8IZP6 322 aaKnown RBP4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 SLC44A3Q8N4M1 653 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 ZNF433Q8N7K0 673 aaPredicted RBP4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 ATP6V1C2Q8NEY4 427 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 OR4K17Q8NGC6 315 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 OR51G2Q8NGK0 314 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 OR51A7Q8NH64 312 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 GOT1L1Q8NHS2 421 aaPredicted RBP4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 TSEN15Q8WW01 171 aaKnown RBP4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 RSPRY1Q96DX4 576 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 SH3YL1Q96HL8 342 aaPredicted RBP4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 ERMAPQ96PL5 475 aaPredicted RBP4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 SECISBP2Q96T21 854 aaKnown RBP4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 TBX5Q99593 518 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 PCED1AQ9H1Q7 454 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 IKZF5Q9H5V7 419 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 METTL7AQ9H8H3 244 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 TCF7L1Q9HCS4 588 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 LRIT1Q9P2V4 623 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 KLHL21Q9UJP4 597 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 HCN2Q9UL51 889 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 ZNF443Q9Y2A4 671 aaPredicted RBP4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 CDH10Q9Y6N8 788 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 ASPDHA6ND91 283 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 A8MVJ9 347 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 C17orf105B2RV13 164 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 PCDH17O14917 1159 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 KRT33AO76009 404 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 CDK1P06493 297 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 SLC35E2P0CK97 266 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 TCEA1P23193 301 aaKnown RBP4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 DRD3P35462 400 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 PXNP49023 591 aaPredicted RBP4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 ZNF41P51814 821 aaPredicted RBP4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 AP3S2P59780 193 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 PITPNAQ00169 270 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 PDE7AQ13946 482 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 GTF2IRD2BQ6EKJ0 949 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 FAM109BQ6ICB4 259 aaPredicted RBP4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 HDDC2Q7Z4H3 204 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 GTF2IRD2Q86UP8 949 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 FAM86B1Q8N7N1 296 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 OR52R1Q8NGF1 315 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 OR9A4Q8NGU2 314 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 HMGCLL1Q8TB92 370 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 C15orf40Q8WUR7 153 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 TMEM239Q8WW34 195 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 TMEM203Q969S6 136 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 LPAR4Q99677 370 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 POLDIP3Q9BY77 421 aaKnown RBP4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 PLA2G2FQ9BZM2 168 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 STRADBQ9C0K7 418 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 C6orf106Q9H6K1 298 aaPredicted RBP4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 SP140LQ9H930 580 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 ENPP5Q9UJA9 477 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 TMEM14AQ9Y6G1 99 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 PATJQ8NI35 1801 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 A0A1W2PPC4 97 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 J3QLW9 94 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 TMPRSS11DO60235 418 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 CDRT1O95170 752 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 DHFRP00374 187 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 ZNF19P17023 458 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 MAPK3P27361 379 aaPredicted RBP4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 SLC15A1P46059 708 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 NCS1P62166 190 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 ACTA2P62736 377 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 ACTG2P63267 376 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 CHRNEQ04844 493 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 RAB40BQ12829 278 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 TSPAN31Q12999 210 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 ILKQ13418 452 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 NNATQ16517 81 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 ZNF385BQ569K4 471 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 TMEM31Q5JXX7 168 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 KIAA1211LQ6NV74 962 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 ULK3Q6PHR2 472 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 B3GNT8Q7Z7M8 397 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 SLITRK4Q8IW52 837 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 IZUMO1Q8IYV9 350 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 TMEM156Q8N614 296 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 ANKK1Q8NFD2 765 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 GRPEL2Q8TAA5 225 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 ADAMTS16Q8TE57 1224 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 NUDT8Q8WV74 236 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 ADAD1Q96M93 576 aaKnown RBP4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 SLC30A2Q9BRI3 323 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 NANSQ9NR45 359 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 SIRT5Q9NXA8 310 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 SPHK1Q9NYA1 384 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 TMPRSS11EQ9UL52 423 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 SLC7A7Q9UM01 511 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 DAPP1Q9UN19 280 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 STUB1Q9UNE7 303 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 N6AMT1Q9Y5N5 214 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 MICAL3Q7RTP6 2002 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms