RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 CCDC115Q96NT0 180 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 GPR78Q96P69 363 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 PITX2Q99697 317 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 SLC26A1Q9H2B4 701 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 POLG2Q9UHN1 485 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 CRLS1Q9UJA2 301 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 RNF6Q9Y252 685 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 LOC100130705A0A1B0GUX0 176 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 FAM149AA5PLN7 773 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 WASHC1A8K0Z3 465 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 PLA2G10O15496 165 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 AIREO43918 545 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 RPLP0P05388 317 aaKnown RBP6.42□□□□□ -1.38
CSDE1-204ENST00000369530 LPOP22079 712 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-204ENST00000369530 GPX3P22352 226 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 TNFSF8P32971 234 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 PIGAP37287 484 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 POU4F1Q01851 419 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 RPA4Q13156 261 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 TSTA3Q13630 321 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-204ENST00000369530 DNLZQ5SXM8 178 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 GLYATQ6IB77 296 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 ANGPTL8Q6UXH0 198 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 RNF44Q7L0R7 432 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 PGBD3Q8N328 593 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 NKAIN3Q8N8D7 197 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 IFI44Q8TCB0 444 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 RIT1Q92963 219 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 ESAMQ96AP7 390 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 CDKN2AIPNLQ96HQ2 116 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 EGFL8Q99944 293 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 MIR1-1HGQ9H1L0 117 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 DPEP2Q9H4A9 486 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 NT5DC2Q9H857 520 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 SLC22A11Q9NSA0 550 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 ZNF275Q9NSD4 429 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-204ENST00000369530 ZDHHC2Q9UIJ5 367 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 TMEFF2Q9UIK5 374 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-204ENST00000369530 ZMIZ1Q9ULJ6 1067 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 ASXL3Q9C0F0 2248 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 ANKRD11Q6UB99 2663 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-204ENST00000369530 CEP250Q9BV73 2442 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 PRAMEF33A0A0G2JMD5 474 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 A0A1W2PPL8 197 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 AIPO00170 330 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 PPP6CO00743 305 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 NUPL2O15504 423 aaKnown RBP6.42□□□□□ -1.38
CSDE1-204ENST00000369530 S1PR4O95977 384 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 MT-ND2P03891 347 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 SLC35E2BP0CK96 405 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 GNSP15586 552 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 SLC6A2P23975 617 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 SLC19A1P41440 591 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 CASP2P42575 452 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 RIDAP52758 137 aaKnown RBP6.42□□□□□ -1.38
CSDE1-204ENST00000369530 ST8SIA6P61647 398 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 CCL7P80098 99 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 PRKG2Q13237 762 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.42□□□□□ -1.382e-9■■□□□ 11.8
CSDE1-204ENST00000369530 RTL4Q6ZR62 310 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 RAB11FIP2Q7L804 512 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 TIPARPQ7Z3E1 657 aaKnown RBP6.42□□□□□ -1.38
CSDE1-204ENST00000369530 SPPL2CQ8IUH8 684 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 VRK3Q8IV63 474 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 FUNDC1Q8IVP5 155 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 OR8H3Q8N146 312 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 NXPE1Q8N323 547 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 DNAJC22Q8N4W6 341 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 ATG16L2Q8NAA4 619 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 C2CD4AQ8NCU7 369 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-204ENST00000369530 BVESQ8NE79 360 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 OR2T4Q8NH00 348 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 CHTF18Q8WVB6 975 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 CPNE4Q96A23 557 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-204ENST00000369530 PYCR2Q96C36 320 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 ZNF501Q96CX3 271 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-204ENST00000369530 TRNT1Q96Q11 434 aaKnown RBP6.42□□□□□ -1.38
CSDE1-204ENST00000369530 SERINC2Q96SA4 455 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 KCNJ15Q99712 375 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 INPP5KQ9BT40 448 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 MED18Q9BUE0 208 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 RIOK2Q9BVS4 552 aaKnown RBP6.42□□□□□ -1.38
CSDE1-204ENST00000369530 GSDMCQ9BYG8 508 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 C11orf54Q9H0W9 315 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-204ENST00000369530 TAS2R13Q9NYV9 303 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 CD274Q9NZQ7 290 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 BAIAP2Q9UQB8 552 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 SVEP1Q4LDE5 3571 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 TMEM233B4DJY2 109 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 FPGTO14772 594 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 RGS10O43665 173 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 RAD1O60671 282 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 GPX5O75715 221 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 PAX6P26367 422 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 HNRNPKP61978 463 aaKnown RBP eCLIP6.42□□□□□ -1.38
CSDE1-204ENST00000369530 DCDP81605 110 aaKnown RBP6.42□□□□□ -1.38
CSDE1-204ENST00000369530 PUDPQ08623 228 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 FASTKQ14296 549 aaKnown RBP6.42□□□□□ -1.38
CSDE1-204ENST00000369530 TATDN3Q17R31 274 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 LBHQ53QV2 105 aaPredicted RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms