RNA–Protein interactions for RNA: ENST00000368407.7

EFNA1-202, Transcript of ephrin A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNA1, Length 1,926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-202ENST00000368407 NEIL2Q969S2 332 aa24.8■■□□□ 1.56
EFNA1-202ENST00000368407 UBE2E3Q969T4 207 aa24.8■■□□□ 1.56
EFNA1-202ENST00000368407 IL4I1Q96RQ9 567 aa24.8■■□□□ 1.56
EFNA1-202ENST00000368407 TESQ9UGI8 421 aaKnown RBP24.8■■□□□ 1.56
EFNA1-202ENST00000368407 OTOGLQ3ZCN5 2332 aa24.8■■□□□ 1.56
EFNA1-202ENST00000368407 ARID1BQ8NFD5 2236 aaPredicted RBP24.8■■□□□ 1.56
EFNA1-202ENST00000368407 FABP12A6NFH5 140 aa24.8■■□□□ 1.56
EFNA1-202ENST00000368407 YKT6O15498 198 aa24.8■■□□□ 1.56
EFNA1-202ENST00000368407 H1F0P07305 194 aaKnown RBP24.8■■□□□ 1.56
EFNA1-202ENST00000368407 C1GALT1C1LP0DN25 315 aa24.8■■□□□ 1.56
EFNA1-202ENST00000368407 NBL1P41271 181 aa24.8■■□□□ 1.56
EFNA1-202ENST00000368407 SPEM2Q0P670 501 aa24.8■■□□□ 1.56
EFNA1-202ENST00000368407 RIN1Q13671 783 aa24.8■■□□□ 1.56
EFNA1-202ENST00000368407 ZNF628Q5EBL2 1059 aa24.8■■□□□ 1.56
EFNA1-202ENST00000368407 ADNP2Q6IQ32 1131 aa24.8■■□□□ 1.56
EFNA1-202ENST00000368407 ZFAND1Q8TCF1 268 aa24.8■■□□□ 1.56
EFNA1-202ENST00000368407 CIDECQ96AQ7 238 aaPredicted RBP24.8■■□□□ 1.56
EFNA1-202ENST00000368407 SGPP1Q9BX95 441 aa24.8■■□□□ 1.56
EFNA1-202ENST00000368407 C11orf54Q9H0W9 315 aaPredicted RBP24.8■■□□□ 1.56
EFNA1-202ENST00000368407 ANKRA2Q9H9E1 313 aa24.8■■□□□ 1.56
EFNA1-202ENST00000368407 ABCB9Q9NP78 766 aa24.8■■□□□ 1.56
EFNA1-202ENST00000368407 DIABLOQ9NR28 239 aa24.8■■□□□ 1.56
EFNA1-202ENST00000368407 ACSL6Q9UKU0 697 aa24.8■■□□□ 1.56
EFNA1-202ENST00000368407 DYRK1BQ9Y463 629 aa24.8■■□□□ 1.56
EFNA1-202ENST00000368407 TMEM129A0AVI4 362 aa24.79■■□□□ 1.56
EFNA1-202ENST00000368407 CYP7B1O75881 506 aa24.79■■□□□ 1.56
EFNA1-202ENST00000368407 KLHL18O94889 574 aa24.79■■□□□ 1.56
EFNA1-202ENST00000368407 ZNF806P0C7X5 589 aa24.79■■□□□ 1.56
EFNA1-202ENST00000368407 CKMT1AP12532 417 aa24.79■■□□□ 1.56
EFNA1-202ENST00000368407 MYF5P13349 255 aa24.79■■□□□ 1.56
EFNA1-202ENST00000368407 POU1F1P28069 291 aa24.79■■□□□ 1.56
EFNA1-202ENST00000368407 PPP3R1P63098 170 aa24.79■■□□□ 1.56
EFNA1-202ENST00000368407 QPRTQ15274 297 aa24.79■■□□□ 1.56
EFNA1-202ENST00000368407 SEC23BQ15437 767 aa24.79■■□□□ 1.56
EFNA1-202ENST00000368407 KLHL22Q53GT1 634 aa24.79■■□□□ 1.56
EFNA1-202ENST00000368407 TMPRSS11BQ86T26 416 aa24.79■■□□□ 1.56
EFNA1-202ENST00000368407 LINC01555Q8NAE3 123 aa24.79■■□□□ 1.56
EFNA1-202ENST00000368407 KCTD7Q96MP8 289 aa24.79■■□□□ 1.56
EFNA1-202ENST00000368407 TIGARQ9NQ88 270 aa24.79■■□□□ 1.56
EFNA1-202ENST00000368407 NLGN3Q9NZ94 848 aa24.79■■□□□ 1.56
EFNA1-202ENST00000368407 DNAJC27Q9NZQ0 273 aa24.79■■□□□ 1.56
EFNA1-202ENST00000368407 A6NL46 340 aa24.78■■□□□ 1.56
EFNA1-202ENST00000368407 NOTOA8MTQ0 251 aa24.78■■□□□ 1.56
EFNA1-202ENST00000368407 PPM1DO15297 605 aa24.78■■□□□ 1.56
EFNA1-202ENST00000368407 CDRT1O95170 752 aa24.78■■□□□ 1.56
EFNA1-202ENST00000368407 ERGP11308 486 aa24.78■■□□□ 1.56
EFNA1-202ENST00000368407 TAP2Q03519 686 aa24.78■■□□□ 1.56
EFNA1-202ENST00000368407 TPBGQ13641 420 aa24.78■■□□□ 1.56
EFNA1-202ENST00000368407 PGBD2Q6P3X8 592 aa24.78■■□□□ 1.56
EFNA1-202ENST00000368407 SLC35F3Q8IY50 421 aa24.78■■□□□ 1.56
EFNA1-202ENST00000368407 LRRC56Q8IYG6 542 aaPredicted RBP24.78■■□□□ 1.56
EFNA1-202ENST00000368407 ZNF764Q96H86 408 aaPredicted RBP24.78■■□□□ 1.56
EFNA1-202ENST00000368407 COQ7Q99807 217 aa24.78■■□□□ 1.56
EFNA1-202ENST00000368407 SOSTQ9BQB4 213 aa24.78■■□□□ 1.56
EFNA1-202ENST00000368407 POLR2J3Q9H1A7 115 aaKnown RBP24.78■■□□□ 1.56
EFNA1-202ENST00000368407 FGF20Q9NP95 211 aaPredicted RBP24.78■■□□□ 1.56
EFNA1-202ENST00000368407 RXFP3Q9NSD7 469 aa24.78■■□□□ 1.56
EFNA1-202ENST00000368407 PHF11Q9UIL8 331 aa24.78■■□□□ 1.56
EFNA1-202ENST00000368407 IQCJ-SCHIP1C9J366 451 aaPredicted RBP24.78■■□□□ 1.56
EFNA1-202ENST00000368407 MSL3P1P0C860 447 aa24.78■■□□□ 1.56
EFNA1-202ENST00000368407 PKLRP30613 574 aa24.78■■□□□ 1.56
EFNA1-202ENST00000368407 FGF9P31371 208 aaPredicted RBP24.78■■□□□ 1.56
EFNA1-202ENST00000368407 RAB28P51157 221 aa24.78■■□□□ 1.56
EFNA1-202ENST00000368407 TNK1Q13470 666 aa24.78■■□□□ 1.56
EFNA1-202ENST00000368407 C14orf28Q4W4Y0 310 aa24.78■■□□□ 1.56
EFNA1-202ENST00000368407 LCN1P1Q5VSP4 162 aa24.78■■□□□ 1.56
EFNA1-202ENST00000368407 DUSP18Q8NEJ0 188 aa24.78■■□□□ 1.56
EFNA1-202ENST00000368407 OR4E2Q8NGC2 313 aa24.78■■□□□ 1.56
EFNA1-202ENST00000368407 LCN9Q8WX39 176 aa24.78■■□□□ 1.56
EFNA1-202ENST00000368407 IRF2BPLQ9H1B7 796 aa24.78■■□□□ 1.56
EFNA1-202ENST00000368407 PCDHGB7Q9Y5F8 929 aa24.78■■□□□ 1.56
EFNA1-202ENST00000368407 GOLGA4Q13439 2230 aaKnown RBP24.78■■□□□ 1.56
EFNA1-202ENST00000368407 A0A1W2PQL4 384 aaPredicted RBP24.77■■□□□ 1.56
EFNA1-202ENST00000368407 PIPSLA2A3N6 862 aa24.77■■□□□ 1.56
EFNA1-202ENST00000368407 C5orf58C9J3I9 102 aa24.77■■□□□ 1.56
EFNA1-202ENST00000368407 FASLGP48023 281 aa24.77■■□□□ 1.56
EFNA1-202ENST00000368407 TBPL1P62380 186 aa24.77■■□□□ 1.56
EFNA1-202ENST00000368407 GALK2Q01415 458 aa24.77■■□□□ 1.56
EFNA1-202ENST00000368407 TSTA3Q13630 321 aaPredicted RBP24.77■■□□□ 1.56
EFNA1-202ENST00000368407 SLBPQ14493 270 aaKnown RBP eCLIP24.77■■□□□ 1.56
EFNA1-202ENST00000368407 CHCHD2P9Q5T1J5 151 aaPredicted RBP24.77■■□□□ 1.56
EFNA1-202ENST00000368407 TCTN3Q6NUS6 607 aa24.77■■□□□ 1.56
EFNA1-202ENST00000368407 OR5P2Q8WZ92 322 aa24.77■■□□□ 1.56
EFNA1-202ENST00000368407 FGF11Q92914 225 aa24.77■■□□□ 1.56
EFNA1-202ENST00000368407 ZNF354BQ96LW1 612 aa24.77■■□□□ 1.56
EFNA1-202ENST00000368407 DMRTB1Q96MA1 342 aa24.77■■□□□ 1.56
EFNA1-202ENST00000368407 TMCC2O75069 709 aa24.76■■□□□ 1.55
EFNA1-202ENST00000368407 AZGP1P25311 298 aaKnown RBP24.76■■□□□ 1.55
EFNA1-202ENST00000368407 SDC2P34741 201 aa24.76■■□□□ 1.55
EFNA1-202ENST00000368407 TAS2R50P59544 299 aa24.76■■□□□ 1.55
EFNA1-202ENST00000368407 HNRNPA0Q13151 305 aaKnown RBP24.76■■□□□ 1.55
EFNA1-202ENST00000368407 QSOX2Q6ZRP7 698 aa24.76■■□□□ 1.55
EFNA1-202ENST00000368407 GPR32P1Q8NGA4 272 aa24.76■■□□□ 1.55
EFNA1-202ENST00000368407 OR52I1Q8NGK6 324 aa24.76■■□□□ 1.55
EFNA1-202ENST00000368407 OR4C6Q8NH72 309 aa24.76■■□□□ 1.55
EFNA1-202ENST00000368407 DIRAS2Q96HU8 199 aa24.76■■□□□ 1.55
EFNA1-202ENST00000368407 TTYH2Q9BSA4 534 aa24.76■■□□□ 1.55
EFNA1-202ENST00000368407 MMP28Q9H239 520 aa24.76■■□□□ 1.55
EFNA1-202ENST00000368407 RANGRFQ9HD47 186 aaPredicted RBP24.76■■□□□ 1.55
EFNA1-202ENST00000368407 TP53P04637 393 aaPredicted RBP24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms