RNA–Protein interactions for RNA: ENST00000368205.7

PTPRK-202, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 662 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-202ENST00000368205 ZNF829Q3KNS6 432 aaPredicted RBP3.16□□□□□ -1.9
PTPRK-202ENST00000368205 UGT3A2Q3SY77 523 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 SLC36A3Q495N2 470 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 SAMD4BQ5PRF9 694 aaKnown RBP3.16□□□□□ -1.9
PTPRK-202ENST00000368205 LCE1CQ5T751 118 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 LCE1BQ5T7P3 118 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 INTS11Q5TA45 600 aaKnown RBP3.16□□□□□ -1.9
PTPRK-202ENST00000368205 FAM219BQ5XKK7 198 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 ANKRD26P1Q6NSI1 321 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 NANOGP8Q6NSW7 305 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 RWDD4Q6NW29 188 aaKnown RBP3.16□□□□□ -1.9
PTPRK-202ENST00000368205 DCLRE1AQ6PJP8 1040 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 FIP1L1Q6UN15 594 aaKnown RBP3.16□□□□□ -1.9
PTPRK-202ENST00000368205 RPS27LQ71UM5 84 aaKnown RBP3.16□□□□□ -1.9
PTPRK-202ENST00000368205 GPR141Q7Z602 305 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 ANKRD23Q86SG2 305 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 PIGZQ86VD9 579 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 DHFR2Q86XF0 187 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 CNTN4Q8IWV2 1026 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 AQP12AQ8IXF9 295 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 CPNE9Q8IYJ1 553 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 DNAJC22Q8N4W6 341 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 LRRC52Q8N7C0 313 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 CCNYL1Q8N7R7 359 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 SNX31Q8N9S9 440 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 DNAAF3Q8N9W5 541 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 PAPD5Q8NDF8 572 aaKnown RBP3.16□□□□□ -1.9
PTPRK-202ENST00000368205 TRPV3Q8NET8 790 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 OR5AP2Q8NGF4 316 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 OR2T34Q8NGX1 318 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 OR2T3Q8NH03 318 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 OR8K5Q8NH50 307 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 RSPH1Q8WYR4 309 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 NTAN1Q96AB6 310 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 C18orf25Q96B23 403 aaPredicted RBP3.16□□□□□ -1.9
PTPRK-202ENST00000368205 ISOC1Q96CN7 298 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 SGF29Q96ES7 293 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 PLEKHA8Q96JA3 519 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 CNDP2Q96KP4 475 aaKnown RBP3.16□□□□□ -1.9
PTPRK-202ENST00000368205 SPATA33Q96N06 139 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 TSNARE1Q96NA8 513 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 HNRNPABQ99729 332 aaKnown RBP3.16□□□□□ -1.9
PTPRK-202ENST00000368205 CIB1Q99828 191 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 MRPL57Q9BQC6 102 aaKnown RBP3.16□□□□□ -1.9
PTPRK-202ENST00000368205 APOL2Q9BQE5 337 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 DUSP16Q9BY84 665 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 YTHDF1Q9BYJ9 559 aaKnown RBP3.16□□□□□ -1.9
PTPRK-202ENST00000368205 PAIP1Q9H074 479 aaKnown RBP3.16□□□□□ -1.9
PTPRK-202ENST00000368205 SPATC1LQ9H0A9 340 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 SNX25Q9H3E2 840 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 POMKQ9H5K3 350 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 RPF2Q9H7B2 306 aaKnown RBP3.16□□□□□ -1.9
PTPRK-202ENST00000368205 CXorf21Q9HAI6 301 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 PCDHB16Q9NRJ7 776 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 INIPQ9NRY2 104 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 PIGVQ9NUD9 493 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 SMOXQ9NWM0 555 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 CMTM6Q9NX76 183 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 GDAP2Q9NXN4 497 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 TUBGCP4Q9UGJ1 667 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 TDRKHQ9Y2W6 561 aaKnown RBP3.16□□□□□ -1.9
PTPRK-202ENST00000368205 MTF2Q9Y483 593 aaPredicted RBP3.16□□□□□ -1.9
PTPRK-202ENST00000368205 SNX10Q9Y5X0 201 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 ZNF236Q9UL36 1845 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 NRCAMQ92823 1304 aa3.16□□□□□ -1.9
PTPRK-202ENST00000368205 MIA3Q5JRA6 1907 aa3.15□□□□□ -1.9
PTPRK-202ENST00000368205 DICER1Q9UPY3 1922 aaKnown RBP3.15□□□□□ -1.9
PTPRK-202ENST00000368205 GON4LQ3T8J9 2241 aa3.15□□□□□ -1.9
PTPRK-202ENST00000368205 SYNJ2BP-COX16A0A087WUM0 186 aa3.15□□□□□ -1.91
PTPRK-202ENST00000368205 A0A1W2PQF6 199 aa3.15□□□□□ -1.91
PTPRK-202ENST00000368205 FUOMA2VDF0 154 aa3.15□□□□□ -1.91
PTPRK-202ENST00000368205 A8MT66 165 aa3.15□□□□□ -1.91
PTPRK-202ENST00000368205 H3BMQ9 156 aa3.15□□□□□ -1.91
PTPRK-202ENST00000368205 AP3B1O00203 1094 aa3.15□□□□□ -1.91
PTPRK-202ENST00000368205 CLDN5O00501 218 aa3.15□□□□□ -1.91
PTPRK-202ENST00000368205 UBFD1O14562 309 aaKnown RBP3.15□□□□□ -1.91
PTPRK-202ENST00000368205 CLOCKO15516 846 aa3.15□□□□□ -1.91
PTPRK-202ENST00000368205 HCRTR2O43614 444 aa3.15□□□□□ -1.91
PTPRK-202ENST00000368205 SNAP91O60641 907 aa3.15□□□□□ -1.91
PTPRK-202ENST00000368205 TMCC2O75069 709 aa3.15□□□□□ -1.91
PTPRK-202ENST00000368205 GPC4O75487 556 aa3.15□□□□□ -1.91
PTPRK-202ENST00000368205 SULT1C4O75897 302 aa3.15□□□□□ -1.91
PTPRK-202ENST00000368205 BEST1O76090 585 aa3.15□□□□□ -1.91
PTPRK-202ENST00000368205 CLDN1O95832 211 aa3.15□□□□□ -1.91
PTPRK-202ENST00000368205 IGKV3-15P01624 115 aa3.15□□□□□ -1.91
PTPRK-202ENST00000368205 PGK2P07205 417 aa3.15□□□□□ -1.91
PTPRK-202ENST00000368205 FGF4P08620 206 aa3.15□□□□□ -1.91
PTPRK-202ENST00000368205 TFPTP0C1Z6 253 aa3.15□□□□□ -1.91
PTPRK-202ENST00000368205 HSPA8P11142 646 aaKnown RBP3.15□□□□□ -1.91
PTPRK-202ENST00000368205 HSD17B1P14061 328 aa3.15□□□□□ -1.91
PTPRK-202ENST00000368205 GFAPP14136 432 aa3.15□□□□□ -1.91
PTPRK-202ENST00000368205 PORP16435 677 aaPredicted RBP3.15□□□□□ -1.91
PTPRK-202ENST00000368205 STMN1P16949 149 aa3.15□□□□□ -1.91
PTPRK-202ENST00000368205 UGT1A6P19224 532 aa3.15□□□□□ -1.91
PTPRK-202ENST00000368205 EFNA1P20827 205 aaPredicted RBP3.15□□□□□ -1.91
PTPRK-202ENST00000368205 IMPDH1P20839 514 aa3.15□□□□□ -1.91
PTPRK-202ENST00000368205 IL10P22301 178 aa3.15□□□□□ -1.91
PTPRK-202ENST00000368205 WARSP23381 471 aaKnown RBP3.15□□□□□ -1.91
PTPRK-202ENST00000368205 FASP25445 335 aa3.15□□□□□ -1.91
PTPRK-202ENST00000368205 CD151P48509 253 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms