RNA–Protein interactions for RNA: ENST00000366898.5

PRKN-206, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKN, Length 4,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-206ENST00000366898 YIPF6Q96EC8 236 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 TMEM106CQ9BVX2 250 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 SLC19A3Q9BZV2 496 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 GSTO2Q9H4Y5 243 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 ZDHHC6Q9H6R6 413 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 RDH14Q9HBH5 336 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 MRM3Q9HC36 420 aaKnown RBP11.09□□□□□ -0.63
PRKN-206ENST00000366898 CRLF2Q9HC73 371 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 Q9Y3F1 56 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 CDH10Q9Y6N8 788 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 URGCP-MRPS24S4R325 110 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 NUP214P35658 2090 aaPredicted RBP11.09□□□□□ -0.63
PRKN-206ENST00000366898 MROH6A6NGR9 719 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 GPX5O75715 221 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 PRPS1L1P21108 318 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 EPHB3P54753 998 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 NFKB2Q00653 900 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 DUOXA1Q1HG43 343 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 WDR53Q7Z5U6 358 aaPredicted RBP11.09□□□□□ -0.63
PRKN-206ENST00000366898 OAFQ86UD1 273 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 PIGXQ8TBF5 258 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 OR8D1Q8WZ84 308 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 MICU1Q9BPX6 476 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 SYNPO2LQ9H987 977 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 NUDT4Q9NZJ9 180 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 CD84Q9UIB8 345 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 PCDHA9Q9Y5H5 950 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 PUS1Q9Y606 427 aaKnown RBP eCLIP11.09□□□□□ -0.639e-8■■■■■ 35.6
PRKN-206ENST00000366898 SAP18O00422 153 aaKnown RBP11.09□□□□□ -0.63
PRKN-206ENST00000366898 CHP2O43745 196 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 LATS1O95835 1130 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 S1PR4O95977 384 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 GBAP04062 536 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 SFTPBP07988 381 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 EPHA2P29317 976 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 ZXDBP98169 803 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 ZNF273Q14593 569 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 PRPF38BQ5VTL8 546 aaKnown RBP11.09□□□□□ -0.63
PRKN-206ENST00000366898 FIGNL1Q6PIW4 674 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 MFSD6LQ8IWD5 586 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 NLGN4YQ8NFZ3 816 aaPredicted RBP11.09□□□□□ -0.63
PRKN-206ENST00000366898 CLP1Q92989 425 aaKnown RBP11.09□□□□□ -0.63
PRKN-206ENST00000366898 ELP4Q96EB1 424 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 SLC35A5Q9BS91 424 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 MFSD1Q9H3U5 465 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 ZFP57Q9NU63 452 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 CLEC2DQ9UHP7 191 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 UTS2RQ9UKP6 389 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 SCML1Q9UN30 329 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 RIIAD1A6NNX1 92 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 TNFRSF10BO14763 440 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 FBXO24O75426 580 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 SELPP16109 830 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 FPR3P25089 353 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 WNT4P56705 351 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 SERINC3Q13530 473 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 TAF1AQ15573 450 aaPredicted RBP11.09□□□□□ -0.63
PRKN-206ENST00000366898 TXNDC8Q6A555 127 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 ZNF585AQ6P3V2 769 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 TMIGD1Q6UXZ0 262 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 PGAP3Q96FM1 320 aaPredicted RBP11.09□□□□□ -0.63
PRKN-206ENST00000366898 FUBP3Q96I24 572 aaKnown RBP eCLIP11.09□□□□□ -0.63
PRKN-206ENST00000366898 ZNF599Q96NL3 588 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 UHRF1Q96T88 793 aaPredicted RBP11.09□□□□□ -0.63
PRKN-206ENST00000366898 DOHHQ9BU89 302 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 TUBB1Q9H4B7 451 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 CYP8B1Q9UNU6 501 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 WASF3Q9UPY6 502 aa11.09□□□□□ -0.63
PRKN-206ENST00000366898 SDK1Q7Z5N4 2213 aa11.08□□□□□ -0.64
PRKN-206ENST00000366898 TMEM72A0PK05 275 aa11.08□□□□□ -0.64
PRKN-206ENST00000366898 PCCBP05166 539 aa11.08□□□□□ -0.64
PRKN-206ENST00000366898 RRASP10301 218 aa11.08□□□□□ -0.64
PRKN-206ENST00000366898 CYBAP13498 195 aa11.08□□□□□ -0.64
PRKN-206ENST00000366898 GABRR2P28476 465 aa11.08□□□□□ -0.64
PRKN-206ENST00000366898 RPP30P78346 268 aaKnown RBP11.08□□□□□ -0.64
PRKN-206ENST00000366898 XKR4Q5GH76 650 aa11.08□□□□□ -0.64
PRKN-206ENST00000366898 RPTNQ6XPR3 784 aa11.08□□□□□ -0.64
PRKN-206ENST00000366898 SLC29A4Q7RTT9 530 aa11.08□□□□□ -0.64
PRKN-206ENST00000366898 OR2L3Q8NG85 312 aa11.08□□□□□ -0.64
PRKN-206ENST00000366898 WDR20Q8TBZ3 569 aa11.08□□□□□ -0.64
PRKN-206ENST00000366898 NUDT8Q8WV74 236 aa11.08□□□□□ -0.64
PRKN-206ENST00000366898 SULT4A1Q9BR01 284 aa11.08□□□□□ -0.64
PRKN-206ENST00000366898 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.08□□□□□ -0.64
PRKN-206ENST00000366898 TOLLIPQ9H0E2 274 aa11.08□□□□□ -0.64
PRKN-206ENST00000366898 MAGIXQ9H6Y5 334 aa11.08□□□□□ -0.64
PRKN-206ENST00000366898 DCAF16Q9NXF7 216 aa11.08□□□□□ -0.64
PRKN-206ENST00000366898 IL20RAQ9UHF4 553 aa11.08□□□□□ -0.64
PRKN-206ENST00000366898 SLC16A6O15403 523 aa11.08□□□□□ -0.64
PRKN-206ENST00000366898 B4GALT3O60512 393 aa11.08□□□□□ -0.64
PRKN-206ENST00000366898 CLDN11O75508 207 aa11.08□□□□□ -0.64
PRKN-206ENST00000366898 OR4D1Q15615 310 aa11.08□□□□□ -0.64
PRKN-206ENST00000366898 CARD16Q5EG05 197 aa11.08□□□□□ -0.64
PRKN-206ENST00000366898 PRSS36Q5K4E3 855 aa11.08□□□□□ -0.64
PRKN-206ENST00000366898 CD276Q5ZPR3 534 aa11.08□□□□□ -0.64
PRKN-206ENST00000366898 APOOLQ6UXV4 268 aa11.08□□□□□ -0.64
PRKN-206ENST00000366898 TMUB2Q71RG4 321 aa11.08□□□□□ -0.64
PRKN-206ENST00000366898 CBLN2Q8IUK8 224 aa11.08□□□□□ -0.64
PRKN-206ENST00000366898 SIAH3Q8IW03 269 aa11.08□□□□□ -0.64
PRKN-206ENST00000366898 MRPL41Q8IXM3 137 aaKnown RBP11.08□□□□□ -0.64
PRKN-206ENST00000366898 RGL4Q8IZJ4 473 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms